RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 OSCP1Q8WVF1 389 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 SCG3Q8WXD2 468 aaKnown RBP9.17□□□□□ -0.94
VPS11-206ENST00000614944 DNAJC9Q8WXX5 260 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 CENPKQ9BS16 269 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 SNX25Q9H3E2 840 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 TOPORSQ9NS56 1045 aaPredicted RBP9.17□□□□□ -0.94
VPS11-206ENST00000614944 IGSF5Q9NSI5 407 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 LTBP2Q14767 1821 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 CDK2AP1O14519 115 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 XPOTO43592 962 aaKnown RBP9.17□□□□□ -0.94
VPS11-206ENST00000614944 TSPAN9O75954 239 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 SEC24DO94855 1032 aaPredicted RBP9.17□□□□□ -0.94
VPS11-206ENST00000614944 CHRNA1P02708 482 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 KRT4P19013 534 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 SERPINB3P29508 390 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 ACOT2P49753 483 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 DSTNP60981 165 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 SLC18A3Q16572 532 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 NDUFA5Q16718 116 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 GLE1Q53GS7 698 aaKnown RBP9.17□□□□□ -0.94
VPS11-206ENST00000614944 WDR44Q5JSH3 913 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 FBXO47Q5MNV8 452 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 LVRNQ6Q4G3 990 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 CCNI2Q6ZMN8 369 aaPredicted RBP9.17□□□□□ -0.94
VPS11-206ENST00000614944 LIMS2Q7Z4I7 341 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 HACE1Q8IYU2 909 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 LRRC52Q8N7C0 313 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 OLIG1Q8TAK6 271 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 SEMA4DQ92854 862 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 ITPKCQ96DU7 683 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 SNF8Q96H20 258 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 BCO2Q9BYV7 579 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 HAUS4Q9H6D7 363 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 CYP3A43Q9HB55 503 aa9.17□□□□□ -0.94
VPS11-206ENST00000614944 HLA-DRAP01903 254 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 CENPAP49450 140 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 KIZQ2M2Z5 673 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 SLC10A6Q3KNW5 377 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 ZBTB41Q5SVQ8 909 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 SND1Q7KZF4 910 aaKnown RBP eCLIP9.16□□□□□ -0.94
VPS11-206ENST00000614944 VASH1Q7L8A9 365 aaPredicted RBP9.16□□□□□ -0.94
VPS11-206ENST00000614944 ARFGAP2Q8N6H7 521 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 ZNF333Q96JL9 665 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 HEPHQ9BQS7 1158 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 ADAM22Q9P0K1 906 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 PTPRJQ12913 1337 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 A0A0A6YYK5 440 aaPredicted RBP9.16□□□□□ -0.94
VPS11-206ENST00000614944 C5orf60A6NFR6 353 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 GNAZP19086 355 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 ADCY8P40145 1251 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 TNFSF9P41273 254 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 WNT7BP56706 349 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 B2MP61769 119 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 RELAQ04206 551 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 DRAP1Q14919 205 aaPredicted RBP9.16□□□□□ -0.94
VPS11-206ENST00000614944 CTC1Q2NKJ3 1217 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 DAB2IPQ5VWQ8 1189 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 LRRC8BQ6P9F7 803 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 TUBA3EQ6PEY2 450 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 TRIM67Q6ZTA4 783 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 TRAPPC11Q7Z392 1133 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 KRT77Q7Z794 578 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 ANKS4BQ8N8V4 417 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 RDH13Q8NBN7 331 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 TAS1R2Q8TE23 839 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 OSMRQ99650 979 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 FAM129AQ9BZQ8 928 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 CDHR5Q9HBB8 845 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 CCDC177Q9NQR7 707 aaPredicted RBP9.16□□□□□ -0.94
VPS11-206ENST00000614944 C1orf112Q9NSG2 853 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 SOWAHDA6NJG2 315 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 RASA4BC9J798 803 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 HAT1O14929 419 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 KMOO15229 486 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 RASA4O43374 803 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 CBFA2T3O75081 653 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 DDHD2O94830 711 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 CHRNB1P11230 501 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 COL6A2P12110 1019 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 ACTN1P12814 892 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 BTF3P20290 206 aaKnown RBP9.16□□□□□ -0.94
VPS11-206ENST00000614944 VAV2P52735 878 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 ARFIP2P53365 341 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 HADHBP55084 474 aaKnown RBP9.16□□□□□ -0.94
VPS11-206ENST00000614944 ZNF200P98182 395 aaPredicted RBP9.16□□□□□ -0.94
VPS11-206ENST00000614944 GBE1Q04446 702 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 ZNF569Q5MCW4 686 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 SNX32Q86XE0 403 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 FAM126BQ8IXS8 530 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 SPARTQ8N0X7 666 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 UCMAQ8WVF2 138 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 TMEM40Q8WWA1 233 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 MED30Q96HR3 178 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 CCDC28BQ9BUN5 200 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 FTHL17Q9BXU8 183 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 KLHL4Q9C0H6 718 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 XYLT2Q9H1B5 865 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 LRCH1Q9Y2L9 728 aa9.16□□□□□ -0.94
VPS11-206ENST00000614944 ANO9A1A5B4 782 aa9.15□□□□□ -0.94
VPS11-206ENST00000614944 LACTBL1A8MY62 500 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms