RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 CCNB1P14635 433 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 IL1R2P27930 398 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 SERPINB9P50453 376 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 TNFAIP2Q03169 654 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 ABHD15Q6UXT9 468 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 GALNT4Q8N4A0 578 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 ZNF669Q96BR6 464 aaPredicted RBP12.99□□□□□ -0.33
MSH6-213ENST00000614496 WDR27A2RRH5 827 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 E7ENQ6 273 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 PMM2O15305 246 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 WFS1O76024 890 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 NFICP08651 508 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 BTKQ06187 659 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 TMEM132BQ14DG7 1078 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 ACSBG2Q5FVE4 666 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 SH3PXD2AQ5TCZ1 1133 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 ADGRD1Q6QNK2 874 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 RIPOR1Q6ZS17 1223 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 SIX6OS1Q8N1H7 587 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 MIPOL1Q8TD10 442 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 PTPRN2Q92932 1015 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 ZNF184Q99676 751 aaPredicted RBP12.99□□□□□ -0.33
MSH6-213ENST00000614496 TAS2R1Q9NYW7 299 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 ADA2Q9NZK5 511 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 PRKAG3Q9UGI9 489 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 RPS6KL1Q9Y6S9 549 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 SPDYE5A6NIY4 337 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 PRR5-ARHGAP8B1AHC4 643 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 ERBB2P04626 1255 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 ATP6V1B1P15313 513 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 ACO1P21399 889 aaKnown RBP12.99□□□□□ -0.33
MSH6-213ENST00000614496 ARHGAP8P85298 464 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 ITGA9Q13797 1035 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 SEPT6Q14141 434 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 TCEAL1Q15170 157 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 IRGCQ6NXR0 463 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 PDZD4Q76G19 769 aaPredicted RBP12.99□□□□□ -0.33
MSH6-213ENST00000614496 EXOC8Q8IYI6 725 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 STKLD1Q8NE28 680 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 BFARQ9NZS9 450 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 BCAP29Q9UHQ4 241 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 SNCAIPQ9Y6H5 919 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 KLRG2A4D1S0 409 aaPredicted RBP12.99□□□□□ -0.33
MSH6-213ENST00000614496 LACTBL1A8MY62 500 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 PLA2G6O60733 806 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 AP1G2O75843 785 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 NPTXRO95502 500 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 TRUB2O95900 331 aaKnown RBP12.99□□□□□ -0.33
MSH6-213ENST00000614496 APOEP02649 317 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 VTNP04004 478 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 UBA1P22314 1058 aaKnown RBP12.99□□□□□ -0.33
MSH6-213ENST00000614496 CYP2F1P24903 491 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 SERPINB5P36952 375 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 TDRPQ86YL5 185 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 RNF135Q8IUD6 432 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 DEFB107AQ8IZN7 70 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 RNF148Q8N7C7 305 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 MAB21L3Q8N8X9 362 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 C12orf29Q8N999 325 aa12.99□□□□□ -0.33
MSH6-213ENST00000614496 CLUHO75153 1309 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 KLHL2O95198 593 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 ZBTB7AO95365 584 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 PROCP04070 461 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 VDRP11473 427 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 ZPBP2Q6X784 338 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 USP6NLQ92738 828 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 ANKRD27Q96NW4 1050 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 SERPINI1Q99574 410 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 FRMD8P1Q9BZ68 369 aaPredicted RBP12.98□□□□□ -0.33
MSH6-213ENST00000614496 ASCC2Q9H1I8 757 aaPredicted RBP12.98□□□□□ -0.33
MSH6-213ENST00000614496 GTSE1Q9NYZ3 720 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 COL22A1Q8NFW1 1626 aaPredicted RBP12.98□□□□□ -0.33
MSH6-213ENST00000614496 A0A087WZ62 844 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 OAS1P00973 400 aaKnown RBP12.98□□□□□ -0.33
MSH6-213ENST00000614496 C6orf222P0C671 652 aaPredicted RBP12.98□□□□□ -0.33
MSH6-213ENST00000614496 AMPD1P23109 780 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 POU5F1BQ06416 359 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 ITKQ08881 620 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 DBN1Q16643 649 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 LRRC23Q53EV4 343 aaPredicted RBP12.98□□□□□ -0.33
MSH6-213ENST00000614496 DCAF6Q58WW2 860 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 JADE1Q6IE81 842 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 RBM15BQ8NDT2 890 aaKnown RBP12.98□□□□□ -0.33
MSH6-213ENST00000614496 FDXACB1Q9BRP7 624 aaPredicted RBP12.98□□□□□ -0.33
MSH6-213ENST00000614496 SHANK3Q9BYB0 1731 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 GCOM2Q9BZD3 368 aaPredicted RBP12.98□□□□□ -0.33
MSH6-213ENST00000614496 UNKQ9C0B0 810 aaKnown RBP12.98□□□□□ -0.33
MSH6-213ENST00000614496 ETNK2Q9NVF9 386 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 ATRNL1Q5VV63 1379 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 UGT1A9O60656 530 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 USP12O75317 370 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 SULT1E1P49888 294 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 TRMT5Q32P41 509 aaKnown RBP12.98□□□□□ -0.33
MSH6-213ENST00000614496 HACE1Q8IYU2 909 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 BANPQ8N9N5 519 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 ZNF398Q8TD17 642 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 USP33Q8TEY7 942 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 TMA16Q96EY4 203 aaKnown RBP12.98□□□□□ -0.33
MSH6-213ENST00000614496 ZCWPW1Q9H0M4 648 aa12.98□□□□□ -0.33
MSH6-213ENST00000614496 UGT1A7Q9HAW7 530 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms