RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 SCUBE1Q8IWY4 988 aa22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 FAM178BQ8IXR5 827 aa22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 C12orf56Q8IXR9 622 aa22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 ALDH16A1Q8IZ83 802 aa22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 SLC7A3Q8WY07 619 aa22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 SHC3Q92529 594 aa22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 TRIM11Q96F44 468 aa22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 FAM161BQ96MY7 647 aa22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 XPNPEP1Q9NQW7 623 aa22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 CHORDC1Q9UHD1 332 aaPredicted RBP22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 TREHO43280 583 aa22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 KRT4P19013 534 aa22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 AMPD1P23109 780 aa22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 ADRA1DP25100 572 aa22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 VAMP7P51809 220 aa22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 MFAP3P55082 362 aa22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 ASPHQ12797 758 aa22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 USP4Q13107 963 aa22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 GDF6Q6KF10 455 aaPredicted RBP22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 SYCP3Q8IZU3 236 aa22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 OXNAD1Q96HP4 312 aaPredicted RBP22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 VPS37BQ9H9H4 285 aa22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 ANAPC7Q9UJX3 599 aa22.81■■□□□ 1.24
POLR2J3-220ENST00000613744 TRIP12Q14669 1992 aaPredicted RBP22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 A0A1W2PPM1 405 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 C17orf102A2RUQ5 167 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 AP1G1O43747 822 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 CSDE1O75534 798 aaKnown RBP22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 CABYRO75952 493 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 C22orf31O95567 290 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 DLDP09622 509 aaKnown RBP22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 EN2P19622 333 aaPredicted RBP22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 PHBP35232 272 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 CLCN3P51790 818 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 MCCD1P59942 119 aaPredicted RBP22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 CDK18Q07002 472 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 CENPUQ71F23 418 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 LRRC6Q86X45 466 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 HERPUD2Q9BSE4 406 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 DHRS4Q9BTZ2 278 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 STRA6Q9BX79 667 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 DHX33Q9H6R0 707 aaKnown RBP22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 NRCAMQ92823 1304 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 FCHO1O14526 889 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 ITGA2BP08514 1039 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 PIK3CAP42336 1068 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 EFCAB12Q6NXP0 572 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 BANPQ8N9N5 519 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 ZNF668Q96K58 619 aaPredicted RBP22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 PPP1R16BQ96T49 567 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 ARHGEF4Q9NR80 690 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 GTF2IRD1Q9UHL9 959 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 SHOC2Q9UQ13 582 aa22.8■■□□□ 1.24
POLR2J3-220ENST00000613744 MAFO75444 373 aaPredicted RBP22.79■■□□□ 1.24
POLR2J3-220ENST00000613744 DHRS4L1P0CG22 281 aa22.79■■□□□ 1.24
POLR2J3-220ENST00000613744 CYP11B1P15538 503 aa22.79■■□□□ 1.24
POLR2J3-220ENST00000613744 ALCAMQ13740 583 aa22.79■■□□□ 1.24
POLR2J3-220ENST00000613744 PRKD1Q15139 912 aaPredicted RBP22.79■■□□□ 1.24
POLR2J3-220ENST00000613744 KLC3Q6P597 504 aa22.79■■□□□ 1.24
POLR2J3-220ENST00000613744 ADGRD1Q6QNK2 874 aa22.79■■□□□ 1.24
POLR2J3-220ENST00000613744 PDSS2Q86YH6 399 aa22.79■■□□□ 1.24
POLR2J3-220ENST00000613744 KATNAL2Q8IYT4 538 aa22.79■■□□□ 1.24
POLR2J3-220ENST00000613744 PAWRQ96IZ0 340 aaKnown RBP22.79■■□□□ 1.24
POLR2J3-220ENST00000613744 PDLIM7Q9NR12 457 aa22.79■■□□□ 1.24
POLR2J3-220ENST00000613744 TRMT13Q9NUP7 481 aaKnown RBP22.79■■□□□ 1.24
POLR2J3-220ENST00000613744 EVPLQ92817 2033 aa22.79■■□□□ 1.24
POLR2J3-220ENST00000613744 KLF11O14901 512 aa22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 BUD23O43709 281 aaKnown RBP22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 RNASEH1O60930 286 aaKnown RBP22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 RALAP11233 206 aa22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 PEX3P56589 373 aa22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 MED21Q13503 144 aa22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 KLHL38Q2WGJ6 581 aa22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 RIPOR1Q6ZS17 1223 aa22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 GSTA5Q7RTV2 222 aa22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 MCPH1Q8NEM0 835 aa22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 OR6Y1Q8NGX8 325 aa22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 C1orf21Q9H246 121 aa22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 IKZF4Q9H2S9 585 aa22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 PLA2G4CQ9UP65 541 aa22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 CYP26A1O43174 497 aa22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 USP46P62068 366 aa22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 KSR1Q8IVT5 923 aa22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 TCP10LQ8TDR4 215 aa22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 DGCR14Q96DF8 476 aaKnown RBP22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 FAM49AQ9H0Q0 323 aaPredicted RBP22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 POLR3FQ9H1D9 316 aaPredicted RBP22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 KCNK4Q9NYG8 393 aa22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 ZNF510Q9Y2H8 683 aa22.78■■□□□ 1.24
POLR2J3-220ENST00000613744 FAM170AA1A519 330 aa22.77■■□□□ 1.24
POLR2J3-220ENST00000613744 RRN3P2A6NIE6 340 aa22.77■■□□□ 1.24
POLR2J3-220ENST00000613744 CAPN14A8MX76 684 aa22.77■■□□□ 1.24
POLR2J3-220ENST00000613744 B2RBV5 119 aa22.77■■□□□ 1.24
POLR2J3-220ENST00000613744 K7ENM7 598 aa22.77■■□□□ 1.24
POLR2J3-220ENST00000613744 TSHRP16473 764 aa22.77■■□□□ 1.24
POLR2J3-220ENST00000613744 PPP3CAQ08209 521 aa22.77■■□□□ 1.24
POLR2J3-220ENST00000613744 OVGP1Q12889 678 aa22.77■■□□□ 1.24
POLR2J3-220ENST00000613744 RHOT1Q8IXI2 618 aa22.77■■□□□ 1.24
POLR2J3-220ENST00000613744 EXD1Q8NHP7 514 aa22.77■■□□□ 1.24
POLR2J3-220ENST00000613744 KIFC3Q9BVG8 833 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms