RNA–Protein interactions for RNA: ENST00000611689.4

GRIA3-205, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-205ENST00000611689 PHF7Q9BWX1 381 aaPredicted RBP16.28■□□□□ 0.2
GRIA3-205ENST00000611689 TRPC7Q9HCX4 862 aa16.28■□□□□ 0.2
GRIA3-205ENST00000611689 GDE1Q9NZC3 331 aa16.28■□□□□ 0.2
GRIA3-205ENST00000611689 ZMYM5Q9UJ78 669 aa16.28■□□□□ 0.2
GRIA3-205ENST00000611689 USTQ9Y2C2 406 aa16.28■□□□□ 0.2
GRIA3-205ENST00000611689 EPN1Q9Y6I3 576 aaPredicted RBP16.28■□□□□ 0.2
GRIA3-205ENST00000611689 DOCK6Q96HP0 2047 aa16.28■□□□□ 0.2
GRIA3-205ENST00000611689 TCRBV5S1A1TA0A578 114 aa16.27■□□□□ 0.2
GRIA3-205ENST00000611689 ZNF263O14978 683 aa16.27■□□□□ 0.2
GRIA3-205ENST00000611689 COCHO43405 550 aa16.27■□□□□ 0.2
GRIA3-205ENST00000611689 TLR5O60602 858 aa16.27■□□□□ 0.2
GRIA3-205ENST00000611689 PFKLP17858 780 aa16.27■□□□□ 0.2
GRIA3-205ENST00000611689 HDCP19113 662 aa16.27■□□□□ 0.2
GRIA3-205ENST00000611689 RRM1P23921 792 aa16.27■□□□□ 0.2
GRIA3-205ENST00000611689 GBP2P32456 591 aaPredicted RBP16.27■□□□□ 0.2
GRIA3-205ENST00000611689 CYLC1P35663 651 aaPredicted RBP16.27■□□□□ 0.2
GRIA3-205ENST00000611689 MTF1Q14872 753 aa16.27■□□□□ 0.2
GRIA3-205ENST00000611689 FAM102AQ5T9C2 384 aaPredicted RBP16.27■□□□□ 0.2
GRIA3-205ENST00000611689 RAD9BQ6WBX8 426 aa16.27■□□□□ 0.2
GRIA3-205ENST00000611689 BEND5Q7L4P6 421 aa16.27■□□□□ 0.2
GRIA3-205ENST00000611689 LRRC8AQ8IWT6 810 aa16.27■□□□□ 0.2
GRIA3-205ENST00000611689 CMTM8Q8IZV2 173 aa16.27■□□□□ 0.2
GRIA3-205ENST00000611689 ARL14EPQ8N8R7 260 aaPredicted RBP16.27■□□□□ 0.2
GRIA3-205ENST00000611689 C3orf20Q8ND61 904 aa16.27■□□□□ 0.2
GRIA3-205ENST00000611689 ATXN2LQ8WWM7 1075 aaKnown RBP16.27■□□□□ 0.2
GRIA3-205ENST00000611689 EDEM1Q92611 657 aa16.27■□□□□ 0.2
GRIA3-205ENST00000611689 FAM149B1Q96BN6 582 aa16.27■□□□□ 0.2
GRIA3-205ENST00000611689 TRIM11Q96F44 468 aa16.27■□□□□ 0.2
GRIA3-205ENST00000611689 RNF38Q9H0F5 515 aa16.27■□□□□ 0.2
GRIA3-205ENST00000611689 SLITRK6Q9H5Y7 841 aa16.27■□□□□ 0.2
GRIA3-205ENST00000611689 POPDC2Q9HBU9 364 aa16.27■□□□□ 0.2
GRIA3-205ENST00000611689 NUDT5Q9UKK9 219 aa16.27■□□□□ 0.2
GRIA3-205ENST00000611689 ZFP37Q9Y6Q3 630 aaPredicted RBP16.27■□□□□ 0.2
GRIA3-205ENST00000611689 EYSQ5T1H1 3165 aa16.27■□□□□ 0.19
GRIA3-205ENST00000611689 SPTBN5Q9NRC6 3674 aaKnown RBP16.26■□□□□ 0.19
GRIA3-205ENST00000611689 TRAV19A0A0A6YYK7 116 aa16.26■□□□□ 0.19
GRIA3-205ENST00000611689 HSF2BPO75031 334 aa16.26■□□□□ 0.19
GRIA3-205ENST00000611689 GRAP2O75791 330 aa16.26■□□□□ 0.19
GRIA3-205ENST00000611689 NDUFA10O95299 355 aa16.26■□□□□ 0.19
GRIA3-205ENST00000611689 LCA5LO95447 670 aa16.26■□□□□ 0.19
GRIA3-205ENST00000611689 OLFM2O95897 454 aa16.26■□□□□ 0.19
GRIA3-205ENST00000611689 TBX18O95935 607 aa16.26■□□□□ 0.19
GRIA3-205ENST00000611689 MYBL1P10243 752 aa16.26■□□□□ 0.19
GRIA3-205ENST00000611689 LAMP2P13473 410 aa16.26■□□□□ 0.19
GRIA3-205ENST00000611689 WEE1P30291 646 aa16.26■□□□□ 0.19
GRIA3-205ENST00000611689 GALCP54803 685 aa16.26■□□□□ 0.19
GRIA3-205ENST00000611689 C10orf120Q5SQS8 335 aa16.26■□□□□ 0.19
GRIA3-205ENST00000611689 KLHDC10Q6PID8 442 aa16.26■□□□□ 0.19
GRIA3-205ENST00000611689 DEFB106AQ8N104 65 aa16.26■□□□□ 0.19
GRIA3-205ENST00000611689 ZNF653Q96CK0 615 aa16.26■□□□□ 0.19
GRIA3-205ENST00000611689 ACSF2Q96CM8 615 aaPredicted RBP16.26■□□□□ 0.19
GRIA3-205ENST00000611689 SLC2A13Q96QE2 648 aa16.26■□□□□ 0.19
GRIA3-205ENST00000611689 CDK5RAP1Q96SZ6 601 aaKnown RBP16.26■□□□□ 0.19
GRIA3-205ENST00000611689 TRIM62Q9BVG3 475 aa16.26■□□□□ 0.19
GRIA3-205ENST00000611689 TMEM59LQ9UK28 342 aa16.26■□□□□ 0.19
GRIA3-205ENST00000611689 NAALADL1Q9UQQ1 740 aa16.26■□□□□ 0.19
GRIA3-205ENST00000611689 ANKRD62A6NC57 917 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 SIGLEC16A6NMB1 481 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 EIF3CLB5ME19 914 aaKnown RBP16.25■□□□□ 0.19
GRIA3-205ENST00000611689 C2CD4DB7Z1M9 353 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 DAB1O75553 588 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 GJB6O95452 261 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 H2AFZP0C0S5 128 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 NCAM1P13591 858 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 ABCB4P21439 1286 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 SP100P23497 879 aaPredicted RBP16.25■□□□□ 0.19
GRIA3-205ENST00000611689 ATP5C1P36542 298 aaKnown RBP16.25■□□□□ 0.19
GRIA3-205ENST00000611689 RNASE9P60153 205 aaKnown RBP16.25■□□□□ 0.19
GRIA3-205ENST00000611689 SLC7A9P82251 487 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 FAM78AQ5JUQ0 283 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 PPP1R15BQ5SWA1 713 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 SYPL2Q5VXT5 272 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 PLEKHA7Q6IQ23 1121 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 DNAJC24Q6P3W2 148 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 H2AFVQ71UI9 128 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 RSRC2Q7L4I2 434 aaKnown RBP16.25■□□□□ 0.19
GRIA3-205ENST00000611689 ARCQ7LC44 396 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 TADA2BQ86TJ2 420 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 CCDC112Q8NEF3 446 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 ZSCAN18Q8TBC5 510 aaPredicted RBP16.25■□□□□ 0.19
GRIA3-205ENST00000611689 RNF139Q8WU17 664 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 SMARCD2Q92925 531 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 RPGRIP1Q96KN7 1286 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 ASB16Q96NS5 453 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 EIF3CQ99613 913 aaKnown RBP16.25■□□□□ 0.19
GRIA3-205ENST00000611689 PACSIN1Q9BY11 444 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 THAP2Q9H0W7 228 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 METTL5Q9NRN9 209 aaKnown RBP16.25■□□□□ 0.19
GRIA3-205ENST00000611689 OLA1Q9NTK5 396 aaKnown RBP16.25■□□□□ 0.19
GRIA3-205ENST00000611689 PARVAQ9NVD7 372 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 EPS15L1Q9UBC2 864 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 CNOT8Q9UFF9 292 aaKnown RBP16.25■□□□□ 0.19
GRIA3-205ENST00000611689 DNMT3LQ9UJW3 386 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 NR2E1Q9Y466 385 aa16.25■□□□□ 0.19
GRIA3-205ENST00000611689 ZNF638Q14966 1978 aaKnown RBP16.25■□□□□ 0.19
GRIA3-205ENST00000611689 XIRP2A4UGR9 3374 aa16.24■□□□□ 0.19
GRIA3-205ENST00000611689 CAPN9O14815 690 aa16.24■□□□□ 0.19
GRIA3-205ENST00000611689 MDM4O15151 490 aa16.24■□□□□ 0.19
GRIA3-205ENST00000611689 ATMINO43313 823 aaPredicted RBP16.24■□□□□ 0.19
GRIA3-205ENST00000611689 CKMP06732 381 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms