RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 CST3P01034 146 aaPredicted RBP23.21■■□□□ 1.31
SHANK2-220ENST00000608988 MIPP30301 263 aa23.21■■□□□ 1.31
SHANK2-220ENST00000608988 TRPC3Q13507 836 aa23.21■■□□□ 1.31
SHANK2-220ENST00000608988 KCNT1Q5JUK3 1230 aa23.21■■□□□ 1.31
SHANK2-220ENST00000608988 SDCBP2Q9H190 292 aa23.21■■□□□ 1.31
SHANK2-220ENST00000608988 USP18Q9UMW8 372 aa23.21■■□□□ 1.31
SHANK2-220ENST00000608988 PRR5-ARHGAP8B1AHC4 643 aa23.2■■□□□ 1.3
SHANK2-220ENST00000608988 H0YIN7 160 aa23.2■■□□□ 1.3
SHANK2-220ENST00000608988 PEX1O43933 1283 aa23.2■■□□□ 1.3
SHANK2-220ENST00000608988 CD48P09326 243 aa23.2■■□□□ 1.3
SHANK2-220ENST00000608988 ALDH18A1P54886 795 aaKnown RBP23.2■■□□□ 1.3
SHANK2-220ENST00000608988 ARHGAP8P85298 464 aa23.2■■□□□ 1.3
SHANK2-220ENST00000608988 BTKQ06187 659 aa23.2■■□□□ 1.3
SHANK2-220ENST00000608988 CYS1Q717R9 158 aa23.2■■□□□ 1.3
SHANK2-220ENST00000608988 ILDR2Q71H61 639 aa23.2■■□□□ 1.3
SHANK2-220ENST00000608988 NCAPG2Q86XI2 1143 aa23.2■■□□□ 1.3
SHANK2-220ENST00000608988 XYLT1Q86Y38 959 aa23.2■■□□□ 1.3
SHANK2-220ENST00000608988 KIAA0319LQ8IZA0 1049 aa23.2■■□□□ 1.3
SHANK2-220ENST00000608988 ACMSDQ8TDX5 336 aa23.2■■□□□ 1.3
SHANK2-220ENST00000608988 NSUN6Q8TEA1 469 aaKnown RBP23.2■■□□□ 1.3
SHANK2-220ENST00000608988 MECRQ9BV79 373 aa23.2■■□□□ 1.3
SHANK2-220ENST00000608988 KLHL4Q9C0H6 718 aa23.2■■□□□ 1.3
SHANK2-220ENST00000608988 YDJCA8MPS7 323 aa23.19■■□□□ 1.3
SHANK2-220ENST00000608988 ZCCHC18P0CG32 403 aa23.19■■□□□ 1.3
SHANK2-220ENST00000608988 UQCRBP14927 111 aa23.19■■□□□ 1.3
SHANK2-220ENST00000608988 MED21Q13503 144 aa23.19■■□□□ 1.3
SHANK2-220ENST00000608988 BAATQ14032 418 aaPredicted RBP23.19■■□□□ 1.3
SHANK2-220ENST00000608988 RASSF3Q86WH2 238 aa23.19■■□□□ 1.3
SHANK2-220ENST00000608988 TAB3Q8N5C8 712 aaPredicted RBP23.19■■□□□ 1.3
SHANK2-220ENST00000608988 MTMR14Q8NCE2 650 aa23.19■■□□□ 1.3
SHANK2-220ENST00000608988 MCRS1Q96EZ8 462 aa23.19■■□□□ 1.3
SHANK2-220ENST00000608988 NIFKQ9BYG3 293 aaKnown RBP23.19■■□□□ 1.3
SHANK2-220ENST00000608988 FAM159BA6NKW6 160 aa23.19■■□□□ 1.3
SHANK2-220ENST00000608988 AP1G1O43747 822 aa23.19■■□□□ 1.3
SHANK2-220ENST00000608988 OATP04181 439 aa23.19■■□□□ 1.3
SHANK2-220ENST00000608988 TGM2P21980 687 aa23.19■■□□□ 1.3
SHANK2-220ENST00000608988 GABRB2P47870 512 aa23.19■■□□□ 1.3
SHANK2-220ENST00000608988 LSAMPQ13449 338 aa23.19■■□□□ 1.3
SHANK2-220ENST00000608988 SLC7A3Q8WY07 619 aa23.19■■□□□ 1.3
SHANK2-220ENST00000608988 TMEM143Q96AN5 459 aa23.19■■□□□ 1.3
SHANK2-220ENST00000608988 NLRP4Q96MN2 994 aa23.19■■□□□ 1.3
SHANK2-220ENST00000608988 BTBD9Q96Q07 612 aa23.19■■□□□ 1.3
SHANK2-220ENST00000608988 CALN1Q9BXU9 219 aa23.19■■□□□ 1.3
SHANK2-220ENST00000608988 GCOM2Q9BZD3 368 aaPredicted RBP23.19■■□□□ 1.3
SHANK2-220ENST00000608988 USP29Q9HBJ7 922 aa23.19■■□□□ 1.3
SHANK2-220ENST00000608988 XAB2Q9HCS7 855 aaKnown RBP23.19■■□□□ 1.3
SHANK2-220ENST00000608988 RAB6BQ9NRW1 208 aa23.19■■□□□ 1.3
SHANK2-220ENST00000608988 PGAP2Q9UHJ9 254 aa23.19■■□□□ 1.3
SHANK2-220ENST00000608988 BCLAF3A2AJT9 711 aaKnown RBP23.18■■□□□ 1.3
SHANK2-220ENST00000608988 SPATA31C2B4DYI2 1134 aa23.18■■□□□ 1.3
SHANK2-220ENST00000608988 H7C0C1 242 aa23.18■■□□□ 1.3
SHANK2-220ENST00000608988 ADCY3O60266 1144 aa23.18■■□□□ 1.3
SHANK2-220ENST00000608988 PENKP01210 267 aaPredicted RBP23.18■■□□□ 1.3
SHANK2-220ENST00000608988 MMP10P09238 476 aa23.18■■□□□ 1.3
SHANK2-220ENST00000608988 ASPAP45381 313 aa23.18■■□□□ 1.3
SHANK2-220ENST00000608988 ATP5OP48047 213 aa23.18■■□□□ 1.3
SHANK2-220ENST00000608988 EFNA5P52803 228 aa23.18■■□□□ 1.3
SHANK2-220ENST00000608988 ITGA9Q13797 1035 aa23.18■■□□□ 1.3
SHANK2-220ENST00000608988 ZNF699Q32M78 642 aa23.18■■□□□ 1.3
SHANK2-220ENST00000608988 PGM2L1Q6PCE3 622 aa23.18■■□□□ 1.3
SHANK2-220ENST00000608988 RFX8Q6ZV50 586 aa23.18■■□□□ 1.3
SHANK2-220ENST00000608988 MAP7D3Q8IWC1 876 aa23.18■■□□□ 1.3
SHANK2-220ENST00000608988 GSDMBQ8TAX9 411 aa23.18■■□□□ 1.3
SHANK2-220ENST00000608988 HSPH1Q92598 858 aa23.18■■□□□ 1.3
SHANK2-220ENST00000608988 CLPTM1LQ96KA5 538 aa23.18■■□□□ 1.3
SHANK2-220ENST00000608988 GMLQ99445 158 aa23.18■■□□□ 1.3
SHANK2-220ENST00000608988 RNF146Q9NTX7 359 aa23.18■■□□□ 1.3
SHANK2-220ENST00000608988 MAFBQ9Y5Q3 323 aaPredicted RBP23.18■■□□□ 1.3
SHANK2-220ENST00000608988 CXorf49A8MYA2 514 aaPredicted RBP23.17■■□□□ 1.3
SHANK2-220ENST00000608988 FAM189A1O60320 539 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 TOMM70O94826 608 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 PRDX6P30041 224 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 L1CAMP32004 1257 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 PDK2Q15119 407 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 RABGAP1LQ5R372 815 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 CES4AQ5XG92 561 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 SEPT12Q8IYM1 358 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 NDUFAF2Q8N183 169 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 CCDC33Q8N5R6 958 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 FLAD1Q8NFF5 587 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 ACTRT2Q8TDY3 377 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 USP6NLQ92738 828 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 LBHD1Q9BQE6 289 aaPredicted RBP23.17■■□□□ 1.3
SHANK2-220ENST00000608988 MTMR12Q9C0I1 747 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 TMEM39BQ9GZU3 492 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 EBF3Q9H4W6 596 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 APOBEC2Q9Y235 224 aaKnown RBP23.17■■□□□ 1.3
SHANK2-220ENST00000608988 CASQ2O14958 399 aaPredicted RBP23.17■■□□□ 1.3
SHANK2-220ENST00000608988 RNASEH1O60930 286 aaKnown RBP23.17■■□□□ 1.3
SHANK2-220ENST00000608988 TOM1L1O75674 476 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 MAGEA3P43357 314 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 ZNF143P52747 638 aaPredicted RBP23.17■■□□□ 1.3
SHANK2-220ENST00000608988 COPAP53621 1224 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 TUBB3Q13509 450 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 RAPH1Q70E73 1250 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 CAND1Q86VP6 1230 aaKnown RBP23.17■■□□□ 1.3
SHANK2-220ENST00000608988 CDAN1Q8IWY9 1227 aa23.17■■□□□ 1.3
SHANK2-220ENST00000608988 PIWIL2Q8TC59 973 aaKnown RBP23.17■■□□□ 1.3
SHANK2-220ENST00000608988 EZH1Q92800 747 aaPredicted RBP23.17■■□□□ 1.3
SHANK2-220ENST00000608988 MRPL4Q9BYD3 311 aaKnown RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms