RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 OXCT2Q9BYC2 517 aaPredicted RBP11.11□□□□□ -0.63
LINC01001-203ENST00000607448 ZNF334Q9HCZ1 680 aaPredicted RBP11.11□□□□□ -0.63
LINC01001-203ENST00000607448 AVENQ9NQS1 362 aaPredicted RBP11.11□□□□□ -0.63
LINC01001-203ENST00000607448 FAM114A2Q9NRY5 505 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 SNX9Q9Y5X1 595 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 ANKRD62A6NC57 917 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 GOLGA6L10A6NI86 522 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 MYO1CO00159 1063 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 KRIT1O00522 736 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 EIF3HO15372 352 aaKnown RBP eCLIP11.11□□□□□ -0.63
LINC01001-203ENST00000607448 SART1O43290 800 aaKnown RBP11.11□□□□□ -0.63
LINC01001-203ENST00000607448 MYL4P12829 197 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 PAX3P23760 479 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 PNPLA4P41247 253 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 GPR15P49685 360 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 EPHA5P54756 1037 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 MRPS25P82663 173 aaKnown RBP11.11□□□□□ -0.63
LINC01001-203ENST00000607448 SLC20A2Q08357 652 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 PSMD6Q15008 389 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 TEAD2Q15562 447 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 SOWAHAQ2M3V2 549 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 TTMPQ5BVD1 217 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 TANGO2Q6ICL3 276 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 WDR49Q8IV35 697 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 FLCNQ8NFG4 579 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 OLIG1Q8TAK6 271 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 SHKBP1Q8TBC3 707 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 ZNF512Q96ME7 567 aaPredicted RBP11.11□□□□□ -0.63
LINC01001-203ENST00000607448 SEPT5Q99719 369 aaPredicted RBP11.11□□□□□ -0.63
LINC01001-203ENST00000607448 CARD9Q9H257 536 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 DDX43Q9NXZ2 648 aaKnown RBP11.11□□□□□ -0.63
LINC01001-203ENST00000607448 FBXL21Q9UKT6 434 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 DSEQ9UL01 958 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 MAFFQ9ULX9 164 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 NME7Q9Y5B8 376 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 ZFP37Q9Y6Q3 630 aaPredicted RBP11.11□□□□□ -0.63
LINC01001-203ENST00000607448 HELZP42694 1942 aaKnown RBP11.1□□□□□ -0.63
LINC01001-203ENST00000607448 GOLGA6L10A0A0M3HER8 536 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 A0A1W2PRU2 124 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 MIF4GDA9UHW6 222 aaKnown RBP11.1□□□□□ -0.63
LINC01001-203ENST00000607448 TNNC2P02585 160 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 FAM153BP0C7A2 387 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 TNNI1P19237 187 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 VAMP7P51809 220 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 GNGT1P63211 74 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 DLG4P78352 724 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 RBP5P82980 135 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 HLTFQ14527 1009 aaKnown RBP eCLIP11.1□□□□□ -0.63
LINC01001-203ENST00000607448 DUOXA2Q1HG44 320 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 FAM153CQ494X1 144 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 CBWD6Q4V339 395 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 CBWD3Q5JTY5 395 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 FAM78AQ5JUQ0 283 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 CBWD5Q5RIA9 395 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 GAREM2Q75VX8 874 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 METTL23Q86XA0 190 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 SPATS2Q86XZ4 545 aaKnown RBP11.1□□□□□ -0.63
LINC01001-203ENST00000607448 THEM5Q8N1Q8 247 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 ELMOD1Q8N336 334 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 ARFGAP2Q8N6H7 521 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 SLC35G2Q8TBE7 412 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 KBTBD7Q8WVZ9 684 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 SEC14L1Q92503 715 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 NXPE3Q969Y0 559 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 ARL8AQ96BM9 186 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 HPDLQ96IR7 371 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 PHOX2BQ99453 314 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 PKMYT1Q99640 499 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 CGRRF1Q99675 332 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 AGPAT1Q99943 283 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 HINFPQ9BQA5 517 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 GPR88Q9GZN0 384 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 RAB17Q9H0T7 212 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 KIAA1586Q9HCI6 787 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 ASAH2Q9NR71 780 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 GDAP2Q9NXN4 497 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 ABI2Q9NYB9 513 aaPredicted RBP11.1□□□□□ -0.63
LINC01001-203ENST00000607448 FAM153AQ9UHL3 310 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 RSPH14Q9UHP6 348 aa11.1□□□□□ -0.63
LINC01001-203ENST00000607448 ARIH1Q9Y4X5 557 aaPredicted RBP11.1□□□□□ -0.63
LINC01001-203ENST00000607448 ESYT3A0FGR9 886 aa11.09□□□□□ -0.63
LINC01001-203ENST00000607448 FAM187AA6NFU0 413 aa11.09□□□□□ -0.63
LINC01001-203ENST00000607448 BUB1BO60566 1050 aaPredicted RBP11.09□□□□□ -0.63
LINC01001-203ENST00000607448 HUS1O60921 280 aa11.09□□□□□ -0.63
LINC01001-203ENST00000607448 ATP2C2O75185 946 aa11.09□□□□□ -0.63
LINC01001-203ENST00000607448 LMO2P25791 158 aa11.09□□□□□ -0.63
LINC01001-203ENST00000607448 GBP1P32455 592 aa11.09□□□□□ -0.63
LINC01001-203ENST00000607448 ALDH1A3P47895 512 aa11.09□□□□□ -0.63
LINC01001-203ENST00000607448 NHLH1Q02575 133 aa11.09□□□□□ -0.63
LINC01001-203ENST00000607448 ENPEPQ07075 957 aa11.09□□□□□ -0.63
LINC01001-203ENST00000607448 MGAT5BQ3V5L5 792 aa11.09□□□□□ -0.63
LINC01001-203ENST00000607448 SDHAF4Q5VUM1 108 aa11.09□□□□□ -0.63
LINC01001-203ENST00000607448 C11orf63Q6NUN7 778 aa11.09□□□□□ -0.63
LINC01001-203ENST00000607448 MTSS1LQ765P7 747 aa11.09□□□□□ -0.63
LINC01001-203ENST00000607448 LIMS2Q7Z4I7 341 aa11.09□□□□□ -0.63
LINC01001-203ENST00000607448 DNAJB7Q7Z6W7 309 aaPredicted RBP11.09□□□□□ -0.63
LINC01001-203ENST00000607448 ADGRF2Q8IZF7 708 aa11.09□□□□□ -0.63
LINC01001-203ENST00000607448 LMO3Q8TAP4 145 aa11.09□□□□□ -0.63
LINC01001-203ENST00000607448 GIPC2Q8TF65 315 aa11.09□□□□□ -0.63
LINC01001-203ENST00000607448 PSMG2Q969U7 264 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms