RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 USP3Q9Y6I4 520 aa15.15■□□□□ 0.02
PKNOX1-210ENST00000607049 GREB1Q4ZG55 1949 aa15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 SCAMP3O14828 347 aaKnown RBP15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 TBX18O95935 607 aa15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 ZBED1O96006 694 aa15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 TDGF1P13385 188 aa15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 GRIA2P42262 883 aa15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 FNTBP49356 437 aa15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 TKTL1P51854 596 aa15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 LY6G5CQ5SRR4 150 aa15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 RHBDF2Q6PJF5 856 aa15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 ENOSF1Q7L5Y1 443 aa15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 SYT13Q7L8C5 426 aa15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 MIB1Q86YT6 1006 aa15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 BBS7Q8IWZ6 715 aa15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 SUMF1Q8NBK3 374 aa15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 RNF139Q8WU17 664 aa15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 GOLGA1Q92805 767 aa15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 ZFRQ96KR1 1074 aaKnown RBP15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 KLF16Q9BXK1 252 aaPredicted RBP15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 NUP62CLQ9H1M0 184 aa15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 FBRSL1Q9HCM7 1045 aaKnown RBP15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 ARHGEF4Q9NR80 690 aa15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 SPHK2Q9NRA0 654 aa15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 OLA1Q9NTK5 396 aaKnown RBP15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 DEC1Q9P2X7 70 aa15.14■□□□□ 0.01
PKNOX1-210ENST00000607049 FAM186AA6NE01 2351 aa15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 K7ESF4 209 aa15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 HOXC11O43248 304 aaPredicted RBP15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 KAT7O95251 611 aa15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 APBB3O95704 486 aa15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 PRKCSHP14314 528 aaPredicted RBP15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 OPRD1P41143 372 aa15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 MTIF2P46199 727 aaKnown RBP15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 MFAP3P55082 362 aa15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 YWHAGP61981 247 aaKnown RBP eCLIP15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 MRPS21P82921 87 aaKnown RBP15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 PDE4CQ08493 712 aa15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 HSF5Q4G112 596 aaPredicted RBP15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 RAB41Q5JT25 222 aa15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 LAIR1Q6GTX8 287 aa15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 LCLAT1Q6UWP7 414 aa15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 RRAGAQ7L523 313 aa15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 TRMT11Q7Z4G4 463 aaKnown RBP15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 WDR5BQ86VZ2 330 aa15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 CNOT6LQ96LI5 555 aaKnown RBP15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 INTS2Q9H0H0 1204 aaKnown RBP15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 NMUR1Q9HB89 426 aa15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 RASAL2Q9UJF2 1139 aa15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 PATJQ8NI35 1801 aa15.13■□□□□ 0.01
PKNOX1-210ENST00000607049 ANAPC1Q9H1A4 1944 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 TBC1D3BA6NDS4 549 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 O00370 1275 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 ZBTB24O43167 697 aaPredicted RBP15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 MED7O43513 233 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 ALDH1A2O94788 518 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 KRT5P13647 590 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 CHKAP35790 457 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 TNFRSF4P43489 277 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 SEC13P55735 322 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 EFEMP1Q12805 493 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 DMC1Q14565 340 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 CNGA2Q16280 664 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 C2orf27AQ580R0 203 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 GBP6Q6ZN66 633 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 TTC30AQ86WT1 665 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 RBBP8NLQ8NC74 664 aaPredicted RBP15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 TSTD1Q8NFU3 115 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 UBA3Q8TBC4 463 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 KCTD13Q8WZ19 329 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 BBS2Q9BXC9 721 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 CNGB3Q9NQW8 809 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 OSER1Q9NX31 292 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 MARCH2Q9P0N8 246 aa15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 KIF26AQ9ULI4 1882 aaPredicted RBP15.12■□□□□ 0.01
PKNOX1-210ENST00000607049 M0QYV0 167 aa15.11■□□□□ 0.01
PKNOX1-210ENST00000607049 CYBBP04839 570 aa15.11■□□□□ 0.01
PKNOX1-210ENST00000607049 ERCC5P28715 1186 aaPredicted RBP15.11■□□□□ 0.01
PKNOX1-210ENST00000607049 PGFP49763 221 aa15.11■□□□□ 0.01
PKNOX1-210ENST00000607049 DGKEP52429 567 aa15.11■□□□□ 0.01
PKNOX1-210ENST00000607049 ADIGQ0VDE8 80 aa15.11■□□□□ 0.01
PKNOX1-210ENST00000607049 CT47A1Q5JQC4 288 aaPredicted RBP15.11■□□□□ 0.01
PKNOX1-210ENST00000607049 EOGTQ5NDL2 527 aa15.11■□□□□ 0.01
PKNOX1-210ENST00000607049 NAIF1Q69YI7 327 aaPredicted RBP15.11■□□□□ 0.01
PKNOX1-210ENST00000607049 PM20D1Q6GTS8 502 aa15.11■□□□□ 0.01
PKNOX1-210ENST00000607049 SCD5Q86SK9 330 aa15.11■□□□□ 0.01
PKNOX1-210ENST00000607049 KIAA2013Q8IYS2 634 aa15.11■□□□□ 0.01
PKNOX1-210ENST00000607049 UBR7Q8N806 425 aa15.11■□□□□ 0.01
PKNOX1-210ENST00000607049 KCNV2Q8TDN2 545 aa15.11■□□□□ 0.01
PKNOX1-210ENST00000607049 USP33Q8TEY7 942 aa15.11■□□□□ 0.01
PKNOX1-210ENST00000607049 ULBP1Q9BZM6 244 aa15.11■□□□□ 0.01
PKNOX1-210ENST00000607049 THAP9Q9H5L6 903 aa15.11■□□□□ 0.01
PKNOX1-210ENST00000607049 UBE2TQ9NPD8 197 aaPredicted RBP15.11■□□□□ 0.01
PKNOX1-210ENST00000607049 NUDT5Q9UKK9 219 aa15.11■□□□□ 0.01
PKNOX1-210ENST00000607049 NEDD8-MDP1E9PL57 170 aa15.1■□□□□ 0.01
PKNOX1-210ENST00000607049 K7EQS6 105 aa15.1■□□□□ 0.01
PKNOX1-210ENST00000607049 MDM4O15151 490 aa15.1■□□□□ 0.01
PKNOX1-210ENST00000607049 AXIN1O15169 862 aa15.1■□□□□ 0.01
PKNOX1-210ENST00000607049 SART1O43290 800 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms