RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 SLC22A17Q8WUG5 538 aa17.26■□□□□ 0.35
PMF1-206ENST00000606952 CFAP57Q96MR6 1250 aa17.26■□□□□ 0.35
PMF1-206ENST00000606952 ABCC13Q9NSE7 274 aa17.26■□□□□ 0.35
PMF1-206ENST00000606952 MTUS1Q9ULD2 1270 aa17.26■□□□□ 0.35
PMF1-206ENST00000606952 STAP1Q9ULZ2 295 aa17.26■□□□□ 0.35
PMF1-206ENST00000606952 RANBP2P49792 3224 aaKnown RBP17.25■□□□□ 0.35
PMF1-206ENST00000606952 TMEM110-MUSTN1A8MSY1 372 aa17.25■□□□□ 0.35
PMF1-206ENST00000606952 NCK2O43639 380 aa17.25■□□□□ 0.35
PMF1-206ENST00000606952 CLASP2O75122 1294 aaKnown RBP17.25■□□□□ 0.35
PMF1-206ENST00000606952 RNF8O76064 485 aa17.25■□□□□ 0.35
PMF1-206ENST00000606952 DESP17661 470 aa17.25■□□□□ 0.35
PMF1-206ENST00000606952 KLRC2P26717 231 aa17.25■□□□□ 0.35
PMF1-206ENST00000606952 CC2D1AQ6P1N0 951 aaPredicted RBP17.25■□□□□ 0.35
PMF1-206ENST00000606952 RHOT1Q8IXI2 618 aa17.25■□□□□ 0.35
PMF1-206ENST00000606952 UBL4BQ8N7F7 174 aa17.25■□□□□ 0.35
PMF1-206ENST00000606952 KREMEN2Q8NCW0 462 aa17.25■□□□□ 0.35
PMF1-206ENST00000606952 PDZD8Q8NEN9 1154 aa17.25■□□□□ 0.35
PMF1-206ENST00000606952 GOLGA1Q92805 767 aa17.25■□□□□ 0.35
PMF1-206ENST00000606952 FBXO32Q969P5 355 aa17.25■□□□□ 0.35
PMF1-206ENST00000606952 PSMG2Q969U7 264 aa17.25■□□□□ 0.35
PMF1-206ENST00000606952 FAM149B1Q96BN6 582 aa17.25■□□□□ 0.35
PMF1-206ENST00000606952 TIFAQ96CG3 184 aa17.25■□□□□ 0.35
PMF1-206ENST00000606952 OSBPL9Q96SU4 736 aa17.25■□□□□ 0.35
PMF1-206ENST00000606952 ADAM33Q9BZ11 813 aa17.25■□□□□ 0.35
PMF1-206ENST00000606952 CARD9Q9H257 536 aa17.25■□□□□ 0.35
PMF1-206ENST00000606952 PLEKHA4Q9H4M7 779 aa17.25■□□□□ 0.35
PMF1-206ENST00000606952 NMUR1Q9HB89 426 aa17.25■□□□□ 0.35
PMF1-206ENST00000606952 PACSIN2Q9UNF0 486 aaPredicted RBP17.25■□□□□ 0.35
PMF1-206ENST00000606952 MRFAP1Q9Y605 127 aa17.25■□□□□ 0.35
PMF1-206ENST00000606952 SAR1BQ9Y6B6 198 aa17.25■□□□□ 0.35
PMF1-206ENST00000606952 PRRG1O14668 218 aa17.24■□□□□ 0.35
PMF1-206ENST00000606952 PPP3CCP48454 512 aa17.24■□□□□ 0.35
PMF1-206ENST00000606952 HDAC4P56524 1084 aa17.24■□□□□ 0.35
PMF1-206ENST00000606952 TAS2R40P59535 323 aa17.24■□□□□ 0.35
PMF1-206ENST00000606952 RNASE9P60153 205 aaKnown RBP17.24■□□□□ 0.35
PMF1-206ENST00000606952 MTMR3Q13615 1198 aa17.24■□□□□ 0.35
PMF1-206ENST00000606952 VEPH1Q14D04 833 aa17.24■□□□□ 0.35
PMF1-206ENST00000606952 LRIT3Q3SXY7 679 aa17.24■□□□□ 0.35
PMF1-206ENST00000606952 DNTTIP2Q5QJE6 756 aaKnown RBP17.24■□□□□ 0.35
PMF1-206ENST00000606952 CYP4V2Q6ZWL3 525 aaPredicted RBP17.24■□□□□ 0.35
PMF1-206ENST00000606952 ITIH5Q86UX2 942 aa17.24■□□□□ 0.35
PMF1-206ENST00000606952 KATNAL2Q8IYT4 538 aa17.24■□□□□ 0.35
PMF1-206ENST00000606952 ZNF592Q92610 1267 aa17.24■□□□□ 0.35
PMF1-206ENST00000606952 ALG3Q92685 438 aa17.24■□□□□ 0.35
PMF1-206ENST00000606952 KRT35Q92764 455 aa17.24■□□□□ 0.35
PMF1-206ENST00000606952 PBKQ96KB5 322 aa17.24■□□□□ 0.35
PMF1-206ENST00000606952 SLITRK1Q96PX8 696 aa17.24■□□□□ 0.35
PMF1-206ENST00000606952 TBCBQ99426 244 aa17.24■□□□□ 0.35
PMF1-206ENST00000606952 SMOC2Q9H3U7 446 aa17.24■□□□□ 0.35
PMF1-206ENST00000606952 UXTQ9UBK9 157 aaPredicted RBP17.24■□□□□ 0.35
PMF1-206ENST00000606952 CDC23Q9UJX2 597 aa17.24■□□□□ 0.35
PMF1-206ENST00000606952 NAALADL1Q9UQQ1 740 aa17.24■□□□□ 0.35
PMF1-206ENST00000606952 CHD9Q3L8U1 2897 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 TMEM265A0A087WTH1 108 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 A0A1W2PQH9 124 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 EPOPA6NHQ4 379 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 C8AP07357 584 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 MIPP30301 263 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 EPHB3P54753 998 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 TWF1Q12792 350 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 TAF10Q12962 218 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 NNTQ13423 1086 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 HADHQ16836 314 aaKnown RBP17.23■□□□□ 0.35
PMF1-206ENST00000606952 C15orf59Q2T9L4 293 aaPredicted RBP17.23■□□□□ 0.35
PMF1-206ENST00000606952 DCAF6Q58WW2 860 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 DCAF12L1Q5VU92 463 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 SYPL2Q5VXT5 272 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 RASGEF1CQ8N431 466 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 STKLD1Q8NE28 680 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 SLC7A14Q8TBB6 771 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 GIPC2Q8TF65 315 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 FAM172AQ8WUF8 416 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 TEKT4Q8WW24 435 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 CDCA3Q99618 268 aaPredicted RBP17.23■□□□□ 0.35
PMF1-206ENST00000606952 TLR8Q9NR97 1041 aaKnown RBP17.23■□□□□ 0.35
PMF1-206ENST00000606952 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.23■□□□□ 0.35
PMF1-206ENST00000606952 OSER1Q9NX31 292 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 GMIPQ9P107 970 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 RNF14Q9UBS8 474 aa17.23■□□□□ 0.35
PMF1-206ENST00000606952 MDM4O15151 490 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 ZMYND10O75800 440 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 TRUB2O95900 331 aaKnown RBP17.22■□□□□ 0.35
PMF1-206ENST00000606952 F9P00740 461 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 KRT7P08729 469 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 HNRNPA1P09651 372 aaKnown RBP eCLIP17.22■□□□□ 0.35
PMF1-206ENST00000606952 NCAM1P13591 858 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 TFE3P19532 575 aaPredicted RBP17.22■□□□□ 0.35
PMF1-206ENST00000606952 IL1R2P27930 398 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 CA8P35219 290 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 RDXP35241 583 aaKnown RBP17.22■□□□□ 0.35
PMF1-206ENST00000606952 MARCKSL1P49006 195 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 PGFP49763 221 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 SULT1E1P49888 294 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 TUBP50607 506 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 AIF1P55008 147 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 KCNC3Q14003 757 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 DUSP6Q16828 381 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 BTBD8Q5XKL5 378 aa17.22■□□□□ 0.35
PMF1-206ENST00000606952 DNAJB7Q7Z6W7 309 aaPredicted RBP17.22■□□□□ 0.35
PMF1-206ENST00000606952 VSIG1Q86XK7 387 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms