RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 NAALADL1Q9UQQ1 740 aa22.52■■□□□ 1.2
USP6NL-204ENST00000606752 TNFRSF10BO14763 440 aa22.51■■□□□ 1.19
USP6NL-204ENST00000606752 BAIAP3O94812 1187 aa22.51■■□□□ 1.19
USP6NL-204ENST00000606752 ECEL1O95672 775 aa22.51■■□□□ 1.19
USP6NL-204ENST00000606752 ACRP10323 421 aa22.51■■□□□ 1.19
USP6NL-204ENST00000606752 MAGEA11P43364 429 aa22.51■■□□□ 1.19
USP6NL-204ENST00000606752 ATXN1P54253 815 aaKnown RBP22.51■■□□□ 1.19
USP6NL-204ENST00000606752 EPHB4P54760 987 aa22.51■■□□□ 1.19
USP6NL-204ENST00000606752 DRG2P55039 364 aaKnown RBP22.51■■□□□ 1.19
USP6NL-204ENST00000606752 SMARCB1Q12824 385 aa22.51■■□□□ 1.19
USP6NL-204ENST00000606752 BBS12Q6ZW61 710 aa22.51■■□□□ 1.19
USP6NL-204ENST00000606752 UBE2Q1Q7Z7E8 422 aa22.51■■□□□ 1.19
USP6NL-204ENST00000606752 SCN4BQ8IWT1 228 aa22.51■■□□□ 1.19
USP6NL-204ENST00000606752 GRK7Q8WTQ7 553 aa22.51■■□□□ 1.19
USP6NL-204ENST00000606752 IGSF21Q96ID5 467 aa22.51■■□□□ 1.19
USP6NL-204ENST00000606752 RRN3Q9NYV6 651 aa22.51■■□□□ 1.19
USP6NL-204ENST00000606752 NFU1Q9UMS0 254 aa22.51■■□□□ 1.19
USP6NL-204ENST00000606752 CST8O60676 142 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 SLC5A3P53794 718 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 KRT81Q14533 505 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 FAM117BQ6P1L5 589 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 DRICH1Q6PGQ1 229 aaPredicted RBP22.5■■□□□ 1.19
USP6NL-204ENST00000606752 VSIG1Q86XK7 387 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 SCAMP5Q8TAC9 235 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 C8orf48Q96LL4 319 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 FUT8Q9BYC5 575 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 RC3H2Q9HBD1 1191 aaKnown RBP22.5■■□□□ 1.19
USP6NL-204ENST00000606752 IL23AQ9NPF7 189 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 FAM114A2Q9NRY5 505 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 CALCOCO1Q9P1Z2 691 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 MKI67P46013 3256 aaKnown RBP22.5■■□□□ 1.19
USP6NL-204ENST00000606752 VWA8A3KMH1 1905 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 M0QYT0 321 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 TRIM66O15016 1216 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 DAPK3O43293 454 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 NCAM1P13591 858 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 EN2P19622 333 aaPredicted RBP22.5■■□□□ 1.19
USP6NL-204ENST00000606752 GPR17Q13304 367 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 DPYSL3Q14195 570 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 USP41Q3LFD5 358 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 ZC3H12AQ5D1E8 599 aaKnown RBP22.5■■□□□ 1.19
USP6NL-204ENST00000606752 SPOUT1Q5T280 376 aaKnown RBP22.5■■□□□ 1.19
USP6NL-204ENST00000606752 OTUD1Q5VV17 481 aaPredicted RBP22.5■■□□□ 1.19
USP6NL-204ENST00000606752 EMBQ6PCB8 327 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 KCNT2Q6UVM3 1135 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 HDXQ7Z353 690 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 TMCO2Q7Z6W1 182 aaPredicted RBP22.5■■□□□ 1.19
USP6NL-204ENST00000606752 TTC13Q8NBP0 860 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 PGLYRP2Q96PD5 576 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 TRIM62Q9BVG3 475 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 MAK16Q9BXY0 300 aaKnown RBP22.5■■□□□ 1.19
USP6NL-204ENST00000606752 MCOLN1Q9GZU1 580 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 GPATCH2LQ9NWQ4 482 aa22.5■■□□□ 1.19
USP6NL-204ENST00000606752 NLRC5Q86WI3 1866 aa22.49■■□□□ 1.19
USP6NL-204ENST00000606752 LIASO43766 372 aa22.49■■□□□ 1.19
USP6NL-204ENST00000606752 CPB1P15086 417 aa22.49■■□□□ 1.19
USP6NL-204ENST00000606752 RDXP35241 583 aaKnown RBP22.49■■□□□ 1.19
USP6NL-204ENST00000606752 ARPP19P56211 112 aa22.49■■□□□ 1.19
USP6NL-204ENST00000606752 PITX1P78337 314 aaPredicted RBP22.49■■□□□ 1.19
USP6NL-204ENST00000606752 BSPRYQ5W0U4 402 aa22.49■■□□□ 1.19
USP6NL-204ENST00000606752 RSPO2Q6UXX9 243 aaPredicted RBP22.49■■□□□ 1.19
USP6NL-204ENST00000606752 SYDE1Q6ZW31 735 aaPredicted RBP22.49■■□□□ 1.19
USP6NL-204ENST00000606752 BEND5Q7L4P6 421 aa22.49■■□□□ 1.19
USP6NL-204ENST00000606752 DDX42Q86XP3 938 aaKnown RBP eCLIP22.49■■□□□ 1.19
USP6NL-204ENST00000606752 RFX6Q8HWS3 928 aa22.49■■□□□ 1.19
USP6NL-204ENST00000606752 ATAD1Q8NBU5 361 aa22.49■■□□□ 1.19
USP6NL-204ENST00000606752 FAM71BQ8TC56 605 aa22.49■■□□□ 1.19
USP6NL-204ENST00000606752 FAM118BQ9BPY3 351 aa22.49■■□□□ 1.19
USP6NL-204ENST00000606752 PCDH18Q9HCL0 1135 aa22.49■■□□□ 1.19
USP6NL-204ENST00000606752 PTPRDP23468 1912 aa22.48■■□□□ 1.19
USP6NL-204ENST00000606752 LMNB2Q03252 620 aa22.48■■□□□ 1.19
USP6NL-204ENST00000606752 DEUP1Q05D60 604 aa22.48■■□□□ 1.19
USP6NL-204ENST00000606752 MMRN1Q13201 1228 aa22.48■■□□□ 1.19
USP6NL-204ENST00000606752 HLTFQ14527 1009 aaKnown RBP eCLIP22.48■■□□□ 1.19
USP6NL-204ENST00000606752 DPYSL2Q16555 572 aa22.48■■□□□ 1.19
USP6NL-204ENST00000606752 CA9Q16790 459 aa22.48■■□□□ 1.19
USP6NL-204ENST00000606752 KCTD19Q17RG1 926 aaPredicted RBP22.48■■□□□ 1.19
USP6NL-204ENST00000606752 PSTKQ8IV42 348 aaKnown RBP22.48■■□□□ 1.19
USP6NL-204ENST00000606752 CMTR2Q8IYT2 770 aaKnown RBP22.48■■□□□ 1.19
USP6NL-204ENST00000606752 RNF168Q8IYW5 571 aaPredicted RBP22.48■■□□□ 1.19
USP6NL-204ENST00000606752 SLC7A14Q8TBB6 771 aa22.48■■□□□ 1.19
USP6NL-204ENST00000606752 ZNF558Q96NG5 402 aa22.48■■□□□ 1.19
USP6NL-204ENST00000606752 FRMD8P1Q9BZ68 369 aaPredicted RBP22.48■■□□□ 1.19
USP6NL-204ENST00000606752 TRIM31Q9BZY9 425 aa22.48■■□□□ 1.19
USP6NL-204ENST00000606752 DPH5Q9H2P9 285 aa22.48■■□□□ 1.19
USP6NL-204ENST00000606752 LTBP2Q14767 1821 aa22.48■■□□□ 1.19
USP6NL-204ENST00000606752 ZNF487B1APH4 448 aa22.47■■□□□ 1.19
USP6NL-204ENST00000606752 GAS8O95995 478 aa22.47■■□□□ 1.19
USP6NL-204ENST00000606752 IL4RP24394 825 aa22.47■■□□□ 1.19
USP6NL-204ENST00000606752 DYNLT1P63172 113 aa22.47■■□□□ 1.19
USP6NL-204ENST00000606752 BYSLQ13895 437 aaKnown RBP22.47■■□□□ 1.19
USP6NL-204ENST00000606752 TFDP2Q14188 446 aa22.47■■□□□ 1.19
USP6NL-204ENST00000606752 BTG3Q14201 252 aaPredicted RBP22.47■■□□□ 1.19
USP6NL-204ENST00000606752 PPP1R7Q15435 360 aa22.47■■□□□ 1.19
USP6NL-204ENST00000606752 FAM131BQ86XD5 332 aa22.47■■□□□ 1.19
USP6NL-204ENST00000606752 CCDC185Q8N715 623 aa22.47■■□□□ 1.19
USP6NL-204ENST00000606752 SPPL2BQ8TCT7 592 aa22.47■■□□□ 1.19
USP6NL-204ENST00000606752 PGAP3Q96FM1 320 aaPredicted RBP22.47■■□□□ 1.19
USP6NL-204ENST00000606752 RNF157Q96PX1 679 aa22.47■■□□□ 1.19
USP6NL-204ENST00000606752 AP4E1Q9UPM8 1137 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms