RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 CXorf49A8MYA2 514 aaPredicted RBP12.27□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 GBP2P32456 591 aaPredicted RBP12.27□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 GRIA1P42261 906 aa12.27□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ZBTB6Q15916 424 aa12.27□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 KYAT1Q16773 422 aa12.27□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 KLHL38Q2WGJ6 581 aa12.27□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 FAM47CQ5HY64 1035 aa12.27□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 RNF43Q68DV7 783 aa12.27□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SLC27A1Q6PCB7 646 aa12.27□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PYROXD2Q8N2H3 581 aa12.27□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ZC3H15Q8WU90 426 aaKnown RBP12.27□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 DNAJB3Q8WWF6 145 aa12.27□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 TMEM237Q96Q45 408 aa12.27□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CYTH2Q99418 400 aa12.27□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 TINF2Q9BSI4 451 aa12.27□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ETNK1Q9HBU6 452 aa12.27□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 NPHS2Q9NP85 383 aa12.27□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 STARD13Q9Y3M8 1113 aa12.27□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 COL1A2P08123 1366 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 LOC102724159A0A0B4J2E5 919 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 UGT1A9O60656 530 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 MT-ND3P03897 115 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CYP2F1P24903 491 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 YWHAZP63104 245 aaKnown RBP12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PWP2Q15269 919 aaKnown RBP12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 C9orf57Q5W0N0 161 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CAND1Q86VP6 1230 aaKnown RBP12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ZNF276Q8N554 614 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PPM1NQ8N819 430 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 BANPQ8N9N5 519 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SYT17Q9BSW7 474 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 GCOM2Q9BZD3 368 aaPredicted RBP12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 UGT1A7Q9HAW7 530 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 UGT1A10Q9HAW8 530 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 UGT1A8Q9HAW9 530 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 TMPRSS4Q9NRS4 437 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ETNK2Q9NVF9 386 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CACNG4Q9UBN1 327 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 L3MBTL1Q9Y468 752 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 NUMBLQ9Y6R0 609 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SYNJ2BP-COX16A0A087WUM0 186 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 NDC80O14777 642 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 METTL18O95568 372 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 STAU1O95793 577 aaKnown RBP12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PYGBP11216 843 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 TARSP26639 723 aaKnown RBP12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 RABGGTBP53611 331 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SLC18A1P54219 525 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PDK2Q15119 407 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 RASA2Q15283 850 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ZNF410Q86VK4 478 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CCDC185Q8N715 623 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 GBP7Q8N8V2 638 aaPredicted RBP12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 KBTBD7Q8WVZ9 684 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 GRAMD1AQ96CP6 724 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 NRDE2Q9H7Z3 1164 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PLAC1Q9HBJ0 212 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SPON1Q9HCB6 807 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PIH1D1Q9NWS0 290 aaKnown RBP12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 COX16Q9P0S2 106 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PIN4Q9Y237 131 aaKnown RBP12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 IKBKGQ9Y6K9 419 aa12.26□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 STRNO43815 780 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 INHBAP08476 426 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SMIM10L2AP0DMW4 78 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SMIM10L2BP0DMW5 78 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ATP2A2P16615 1042 aaKnown RBP12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SOX4Q06945 474 aaPredicted RBP12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 DCAF4L1Q3SXM0 396 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 LRRC6Q86X45 466 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 VSIG1Q86XK7 387 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SLC2A14Q8TDB8 520 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 FAM111AQ96PZ2 611 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 LRRC37BQ96QE4 947 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 HAO1Q9UJM8 370 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SMIM28A0A1B0GU29 152 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 LPXNO60711 386 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CYP2C9P11712 490 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 L1CAMP32004 1257 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 GNL1P36915 607 aaPredicted RBP12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PITX1P78337 314 aaPredicted RBP12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SMAD1Q15797 465 aaKnown RBP12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SLC9A4Q6AI14 798 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 NOTUMQ6P988 496 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ZNF449Q6P9G9 518 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 FAM131BQ86XD5 332 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 NT5DC4Q86YG4 428 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 MPP5Q8N3R9 675 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 BEST2Q8NFU1 509 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SLC44A1Q8WWI5 657 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ABHD16BQ9H3Z7 469 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 MTMR10Q9NXD2 777 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SLC5A4Q9NY91 659 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PAK5Q9P286 719 aa12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ZC3H7BQ9UGR2 993 aaKnown RBP12.25□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CFAP73A6NFT4 308 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CHADO15335 359 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ZWINTO95229 277 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CBX6O95503 412 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms