RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 AK8Q96MA6 479 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 MMS19Q96T76 1030 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 TRIM9Q9C026 710 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 ELOVL4Q9GZR5 314 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 CCSER2Q9H7U1 834 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 EXOC7Q9UPT5 735 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 NFE2L3Q9Y4A8 694 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 PCDHGB2Q9Y5G2 931 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 PTPRJQ12913 1337 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 OBSL1O75147 1896 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 SPTA1P02549 2419 aa12.5□□□□□ -0.41
PDLIM1P1-201ENST00000604187 A0A1B0GVT2 93 aa12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 WASH3PC4AMC7 463 aa12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 CACNG3O60359 315 aa12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 TYRP14679 529 aa12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 GSE1Q14687 1217 aa12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 STARD3Q14849 445 aa12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 FUT11Q495W5 492 aa12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 L1TD1Q5T7N2 865 aaKnown RBP12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 DCAF12L1Q5VU92 463 aa12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 DYMQ7RTS9 669 aa12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 ZNF605Q86T29 641 aa12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 CADM4Q8NFZ8 388 aa12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 OR5B17Q8NGF7 314 aa12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 LARP4BQ92615 738 aaKnown RBP12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 ANKRD36BP1Q96IX9 119 aa12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 ACCSQ96QU6 501 aa12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 KIF2CQ99661 725 aa12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 DUSP9Q99956 384 aaKnown RBP12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 MRPL45Q9BRJ2 306 aaKnown RBP12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 CBWD1Q9BRT8 395 aa12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 BBS2Q9BXC9 721 aa12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 NACA2Q9H009 215 aa12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 SNX25Q9H3E2 840 aa12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 MRPL44Q9H9J2 332 aaKnown RBP12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 WSB2Q9NYS7 404 aaPredicted RBP12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 TBC1D7Q9P0N9 293 aa12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 USP36Q9P275 1121 aaKnown RBP12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 NME7Q9Y5B8 376 aa12.49□□□□□ -0.41
PDLIM1P1-201ENST00000604187 CYSRT1A8MQ03 144 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 GFRA2O00451 464 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 CLDN5O00501 218 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 TNFSF14O43557 240 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 LDHAP00338 332 aaKnown RBP12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 TNNC2P02585 160 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 HLA-EP13747 358 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 GARTP22102 1010 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 GNL1P36915 607 aaPredicted RBP12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 SMAD1Q15797 465 aaKnown RBP12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 DHRS13Q6UX07 377 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 DBX2Q6ZNG2 339 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 METTL3Q86U44 580 aaKnown RBP12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 CACUL1Q86Y37 369 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 NUP93Q8N1F7 819 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 OR6B3Q8NGW1 331 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 SCAMP5Q8TAC9 235 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 OVCA2Q8WZ82 227 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 XPO6Q96QU8 1125 aaKnown RBP12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 STRA6Q9BX79 667 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 MKRN2Q9H000 416 aaKnown RBP12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 DPEP3Q9H4B8 488 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 PCIF1Q9H4Z3 704 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 INTS13Q9NVM9 706 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 GMIPQ9P107 970 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 CHORDC1Q9UHD1 332 aaPredicted RBP12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 EIF2B4Q9UI10 523 aaKnown RBP12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 RAI2Q9Y5P3 530 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 STON1Q9Y6Q2 735 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 PTPRDP23468 1912 aa12.48□□□□□ -0.41
PDLIM1P1-201ENST00000604187 METTL12A8MUP2 240 aa12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 KCNJ18B7U540 433 aa12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 PLK4O00444 970 aa12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 RTN3O95197 1032 aaPredicted RBP12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 PTPN1P18031 435 aaKnown RBP12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 DGKGP49619 791 aa12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 CSNK1EP49674 416 aaKnown RBP12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 TUBP50607 506 aa12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 TPMTP51580 245 aa12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 GRIN1Q05586 938 aa12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 SUZ12Q15022 739 aaKnown RBP12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 KIF19Q2TAC6 998 aa12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 TPGS1Q6ZTW0 290 aa12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 SYCP3Q8IZU3 236 aa12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 ZNF843Q8N446 348 aa12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 SNX19Q92543 992 aa12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 BHMTQ93088 406 aa12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 NXPE2Q96DL1 559 aa12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 FCRL3Q96P31 734 aaPredicted RBP12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 B3GNT5Q9BYG0 378 aa12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 PRORYQ9H606 182 aa12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 ITM2CQ9NQX7 267 aa12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 MARK1Q9P0L2 795 aa12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 WDR35Q9P2L0 1181 aa12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 SLCO1B1Q9Y6L6 691 aa12.47□□□□□ -0.41
PDLIM1P1-201ENST00000604187 GREM1O60565 184 aa12.46□□□□□ -0.41
PDLIM1P1-201ENST00000604187 GCNT3O95395 438 aa12.46□□□□□ -0.41
PDLIM1P1-201ENST00000604187 GRK6P43250 576 aa12.46□□□□□ -0.41
PDLIM1P1-201ENST00000604187 AFF3P51826 1226 aaKnown RBP12.46□□□□□ -0.41
PDLIM1P1-201ENST00000604187 CASP5P51878 434 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms