RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 FBXO21O94952 628 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 PAPSS2O95340 614 aaPredicted RBP12.13□□□□□ -0.47
CCDC12-209ENST00000604164 ADH5P11766 374 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 GALK1P51570 392 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 ZNF132P52740 706 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 YWHAGP61981 247 aaKnown RBP eCLIP12.13□□□□□ -0.47
CCDC12-209ENST00000604164 ZXDBP98169 803 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 GAD2Q05329 585 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 KCNJ12Q14500 433 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 DHCR24Q15392 516 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 STX1AQ16623 288 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 VWA3BQ502W6 1294 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 HTR3DQ70Z44 454 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 ALYREFQ86V81 257 aaKnown RBP12.13□□□□□ -0.47
CCDC12-209ENST00000604164 IRF2BP1Q8IU81 584 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 UBA3Q8TBC4 463 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 RNF139Q8WU17 664 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 ACDQ96AP0 544 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 ZFRQ96KR1 1074 aaKnown RBP12.13□□□□□ -0.47
CCDC12-209ENST00000604164 HSFY1Q96LI6 401 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 MED15Q96RN5 788 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 CRACR2AQ9BSW2 395 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 TRIM62Q9BVG3 475 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 KLF16Q9BXK1 252 aaPredicted RBP12.13□□□□□ -0.47
CCDC12-209ENST00000604164 NDST4Q9H3R1 872 aa12.13□□□□□ -0.47
CCDC12-209ENST00000604164 GFRA3O60609 400 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 CYP17A1P05093 508 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 IRF1P10914 325 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 BRD2P25440 801 aaKnown RBP12.12□□□□□ -0.47
CCDC12-209ENST00000604164 PON1P27169 355 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 HOXA6P31267 233 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 ACADSBP45954 432 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 SNX16P57768 344 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 BPIFB4P59827 614 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 ADIGQ0VDE8 80 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 PKDCCQ504Y2 493 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 TCP11X2Q5H9J9 407 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 FSTL4Q6MZW2 842 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 SCD5Q86SK9 330 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 MAML2Q8IZL2 1156 aaPredicted RBP12.12□□□□□ -0.47
CCDC12-209ENST00000604164 SLC35F5Q8WV83 523 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 IRGQQ8WZA9 623 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 TFAP2BQ92481 460 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 KAT5Q92993 513 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 KREMEN1Q96MU8 473 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 ULBP1Q9BZM6 244 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 NAT10Q9H0A0 1025 aaKnown RBP12.12□□□□□ -0.47
CCDC12-209ENST00000604164 NMUR1Q9HB89 426 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 ABCC13Q9NSE7 274 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 RBM12Q9NTZ6 932 aaKnown RBP12.12□□□□□ -0.47
CCDC12-209ENST00000604164 OSER1Q9NX31 292 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 MARCH2Q9P0N8 246 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 WDR35Q9P2L0 1181 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 NFE2L3Q9Y4A8 694 aa12.12□□□□□ -0.47
CCDC12-209ENST00000604164 COL4A3Q01955 1670 aa12.11□□□□□ -0.47
CCDC12-209ENST00000604164 CHURC1-FNTBB4DL54 471 aa12.11□□□□□ -0.47
CCDC12-209ENST00000604164 RNF225M0QZC1 329 aaPredicted RBP12.11□□□□□ -0.47
CCDC12-209ENST00000604164 HOXC11O43248 304 aaPredicted RBP12.11□□□□□ -0.47
CCDC12-209ENST00000604164 TBX18O95935 607 aa12.11□□□□□ -0.47
CCDC12-209ENST00000604164 LMNAP02545 664 aaKnown RBP12.11□□□□□ -0.47
CCDC12-209ENST00000604164 APODP05090 189 aa12.11□□□□□ -0.47
CCDC12-209ENST00000604164 SLC9A1P19634 815 aa12.11□□□□□ -0.47
CCDC12-209ENST00000604164 GNA15P30679 374 aa12.11□□□□□ -0.47
CCDC12-209ENST00000604164 CHKAP35790 457 aa12.11□□□□□ -0.47
CCDC12-209ENST00000604164 USP8P40818 1118 aa12.11□□□□□ -0.47
CCDC12-209ENST00000604164 PTK2Q05397 1052 aa12.11□□□□□ -0.47
CCDC12-209ENST00000604164 HSF5Q4G112 596 aaPredicted RBP12.11□□□□□ -0.47
CCDC12-209ENST00000604164 RHBDF2Q6PJF5 856 aa12.11□□□□□ -0.47
CCDC12-209ENST00000604164 MIB1Q86YT6 1006 aa12.11□□□□□ -0.47
CCDC12-209ENST00000604164 BBS7Q8IWZ6 715 aa12.11□□□□□ -0.47
CCDC12-209ENST00000604164 STK32AQ8WU08 396 aa12.11□□□□□ -0.47
CCDC12-209ENST00000604164 SECISBP2LQ93073 1101 aaKnown RBP12.11□□□□□ -0.47
CCDC12-209ENST00000604164 CHFRQ96EP1 664 aa12.11□□□□□ -0.47
CCDC12-209ENST00000604164 XPO6Q96QU8 1125 aaKnown RBP12.11□□□□□ -0.47
CCDC12-209ENST00000604164 PNKPQ96T60 521 aa12.11□□□□□ -0.47
CCDC12-209ENST00000604164 SPHK2Q9NRA0 654 aa12.11□□□□□ -0.47
CCDC12-209ENST00000604164 RASAL2Q9UJF2 1139 aa12.11□□□□□ -0.47
CCDC12-209ENST00000604164 SLC8A2Q9UPR5 921 aa12.11□□□□□ -0.47
CCDC12-209ENST00000604164 CEP83Q9Y592 693 aa12.11□□□□□ -0.47
CCDC12-209ENST00000604164 THAP12O43422 761 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 LETM1O95202 739 aaPredicted RBP12.1□□□□□ -0.47
CCDC12-209ENST00000604164 EGFP01133 1207 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 LCP1P13796 627 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 PTMSP20962 102 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 CNR2P34972 360 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 GRIA2P42262 883 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 HARS2P49590 506 aaKnown RBP12.1□□□□□ -0.47
CCDC12-209ENST00000604164 PGFP49763 221 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 EFEMP1Q12805 493 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 E2F5Q15329 346 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 ARHGAP44Q17R89 818 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 ANO4Q32M45 955 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 LY6G5CQ5SRR4 150 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 FKBP15Q5T1M5 1219 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 BSPRYQ5W0U4 402 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 Q6ZS52 159 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 ZBTB44Q8NCP5 570 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 KCNV2Q8TDN2 545 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 ZNF606Q8WXB4 792 aa12.1□□□□□ -0.47
CCDC12-209ENST00000604164 SHC3Q92529 594 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms