RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 ARHGDIBP52566 201 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 GNGT1P63211 74 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 MAPK7Q13164 816 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 SKIDA1Q1XH10 827 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 HFEQ30201 348 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 GLE1Q53GS7 698 aaKnown RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 LACTB2Q53H82 288 aaPredicted RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 FDX2Q6P4F2 183 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 DARS2Q6PI48 645 aaKnown RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 TRIM65Q6PJ69 517 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 C6orf89Q6UWU4 347 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 REC114Q7Z4M0 266 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 TREML1Q86YW5 311 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 SLC4A11Q8NBS3 891 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 ARRDC4Q8NCT1 418 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 ZNF671Q8TAW3 534 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 PIGOQ8TEQ8 1089 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 LTV1Q96GA3 475 aaPredicted RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 INTS4Q96HW7 963 aaKnown RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 GDAP1L1Q96MZ0 367 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 PRPF18Q99633 342 aaKnown RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 TREX2Q9BQ50 279 aaPredicted RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 EPC1Q9H2F5 836 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 VCXQ9H320 206 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 C14orf93Q9H972 538 aaKnown RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 NRIP3Q9NQ35 241 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 IL1RAPL1Q9NZN1 696 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 BAG5Q9UL15 447 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 SCAF8Q9UPN6 1271 aaKnown RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 TNFSF13BQ9Y275 285 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 FAM32AQ9Y421 112 aaKnown RBP5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 SAMM50Q9Y512 469 aa5.24□□□□□ -1.57
SPTBN1-206ENST00000602898 A0A1B0GVL5 298 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 HNRNPCL2B2RXH8 293 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 ASAP2O43150 1006 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 HNRNPCL1O60812 293 aaKnown RBP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 SEC22BO75396 215 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 UBXN7O94888 489 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 POU3F2P20265 443 aaPredicted RBP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 SERPINB8P50452 374 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 ARF3P61204 181 aaPredicted RBP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 ARF1P84077 181 aaKnown RBP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 YWHAHQ04917 246 aaPredicted RBP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 AUHQ13825 339 aaKnown RBP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 SPCS2Q15005 226 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 EFTUD2Q15029 972 aaKnown RBP eCLIP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 TRIP4Q15650 581 aaPredicted RBP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 TBCEQ15813 527 aaPredicted RBP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 DGKKQ5KSL6 1271 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 INTS3Q68E01 1043 aaKnown RBP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 PGBD2Q6P3X8 592 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 LRIG3Q6UXM1 1119 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 Q6ZUG5 572 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 KRT27Q7Z3Y8 459 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 R3HCC1LQ7Z5L2 792 aaKnown RBP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 AHI1Q8N157 1196 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 STKLD1Q8NE28 680 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 OR6J1Q8NGC5 347 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 LILRB4Q8NHJ6 448 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 URGCPQ8TCY9 931 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 RHBDD1Q8TEB9 315 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 TRAPPC12Q8WVT3 735 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 HERVK_113Q902F9 699 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 LPIN2Q92539 896 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 SYN2Q92777 582 aaPredicted RBP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 NXPE3Q969Y0 559 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 CCDC42Q96M95 316 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 NUP88Q99567 741 aaPredicted RBP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 STRA6Q9BX79 667 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 GRIP2Q9C0E4 1043 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 ISCUQ9H1K1 167 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 ANKZF1Q9H8Y5 726 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 CBX8Q9HC52 389 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 CAB39Q9Y376 341 aaPredicted RBP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 PCDHB14Q9Y5E9 798 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 WDR33Q9C0J8 1336 aaKnown RBP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 C1orf167Q5SNV9 1468 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 THSD7BQ9C0I4 1608 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 PIK3C2AO00443 1686 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 LOC105371267A0A1B0GV96 52 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 POLR2DO15514 142 aaKnown RBP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 B3GALT2O43825 422 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 PEX11AO75192 247 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 TBX10O75333 385 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 SURF6O75683 361 aaKnown RBP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 GLAP06280 429 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 HPGDP15428 266 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 ABCD3P28288 659 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 AKT1P31749 480 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 GUCY1A2P33402 732 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 TECP42680 631 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 HSPA7P48741 367 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 PRKAA2P54646 552 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 B2MP61769 119 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 ELF3P78545 371 aaPredicted RBP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 P3H1Q32P28 736 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 HABP4Q5JVS0 413 aaKnown RBP5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 NCAPH2Q6IBW4 605 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 SUSD1Q6UWL2 747 aa5.23□□□□□ -1.57
SPTBN1-206ENST00000602898 GRIN3AQ8TCU5 1115 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms