RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 EPS8L2Q9H6S3 715 aa8.96□□□□□ -0.97
CSMD1-216ENST00000602557 VTA1Q9NP79 307 aa8.96□□□□□ -0.97
CSMD1-216ENST00000602557 KNL1Q8NG31 2342 aa8.96□□□□□ -0.97
CSMD1-216ENST00000602557 CLASP2O75122 1294 aaKnown RBP8.96□□□□□ -0.97
CSMD1-216ENST00000602557 RBP5P82980 135 aa8.96□□□□□ -0.97
CSMD1-216ENST00000602557 OR6J1Q8NGC5 347 aa8.96□□□□□ -0.97
CSMD1-216ENST00000602557 TRMT13Q9NUP7 481 aaKnown RBP8.96□□□□□ -0.97
CSMD1-216ENST00000602557 MBD5Q9P267 1494 aa8.96□□□□□ -0.97
CSMD1-216ENST00000602557 IFI30P13284 250 aa8.96□□□□□ -0.97
CSMD1-216ENST00000602557 STAT5BP51692 787 aa8.96□□□□□ -0.97
CSMD1-216ENST00000602557 EXOSC10Q01780 885 aaKnown RBP8.96□□□□□ -0.97
CSMD1-216ENST00000602557 ZNF224Q9NZL3 707 aa8.96□□□□□ -0.97
CSMD1-216ENST00000602557 MYH1P12882 1939 aa8.96□□□□□ -0.97
CSMD1-216ENST00000602557 MYH4Q9Y623 1939 aa8.96□□□□□ -0.97
CSMD1-216ENST00000602557 TRAF3Q13114 568 aa8.96□□□□□ -0.97
CSMD1-216ENST00000602557 DCAF6Q58WW2 860 aa8.96□□□□□ -0.97
CSMD1-216ENST00000602557 MFSD14CQ5VZR4 134 aa8.96□□□□□ -0.97
CSMD1-216ENST00000602557 AENQ8WTP8 325 aaKnown RBP8.96□□□□□ -0.97
CSMD1-216ENST00000602557 MAP3K20Q9NYL2 800 aaKnown RBP8.96□□□□□ -0.97
CSMD1-216ENST00000602557 PNPLA7Q6ZV29 1317 aa8.96□□□□□ -0.97
CSMD1-216ENST00000602557 PSMD11O00231 422 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 SERPINB9P50453 376 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 KCNK10P57789 538 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 C11orf96Q7Z7L8 435 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 SETD3Q86TU7 594 aaPredicted RBP8.96□□□□□ -0.98
CSMD1-216ENST00000602557 NAT14Q8WUY8 206 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 SNTNA6NMZ2 147 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 CTSHP09668 335 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 PKNOX1P55347 436 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 CSNK2BP67870 215 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 GALNTL6Q49A17 601 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 SEPT5Q99719 369 aaPredicted RBP8.96□□□□□ -0.98
CSMD1-216ENST00000602557 ALDH8A1Q9H2A2 487 aaPredicted RBP8.96□□□□□ -0.98
CSMD1-216ENST00000602557 SYNDIG1Q9H7V2 258 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 PDS5AQ29RF7 1337 aaKnown RBP8.96□□□□□ -0.98
CSMD1-216ENST00000602557 SPAG6O75602 509 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 TBCELQ5QJ74 424 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 HS6ST3Q8IZP7 471 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 SHCBP1Q8NEM2 672 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 HDAC7Q8WUI4 952 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 ATG4AQ8WYN0 398 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 NOTOA8MTQ0 251 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 NDUFB5O43674 189 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 HIST1H2AGP0C0S8 130 aaPredicted RBP8.96□□□□□ -0.98
CSMD1-216ENST00000602557 HIST1H2ADP20671 130 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 SOAT1P35610 550 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 GOLGA7BQ2TAP0 167 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 ACSF2Q96CM8 615 aaPredicted RBP8.96□□□□□ -0.98
CSMD1-216ENST00000602557 HIST1H2AHQ96KK5 128 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 SEPHS2Q99611 448 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 HIST1H2AJQ99878 128 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 H2AFJQ9BTM1 129 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 MLPHQ9BV36 600 aaPredicted RBP8.96□□□□□ -0.98
CSMD1-216ENST00000602557 PHF20Q9BVI0 1012 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 YIPF2Q9BWQ6 316 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 SLC12A4Q9UP95 1085 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 FLT1P17948 1338 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 VWA5AO00534 786 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 USP12O75317 370 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 ZNF682O95780 498 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 POLBP06746 335 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 TXNP10599 105 aaKnown RBP8.96□□□□□ -0.98
CSMD1-216ENST00000602557 ARF5P84085 180 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 CYP2R1Q6VVX0 501 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 KRT35Q92764 455 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 C12orf4Q9NQ89 552 aa8.96□□□□□ -0.98
CSMD1-216ENST00000602557 TGM2P21980 687 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 HERVK_113P62684 666 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 HPCAP84074 193 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 PRKCEQ02156 737 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 MMRN1Q13201 1228 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 LDLRAP1Q5SW96 308 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 IQSEC1Q6DN90 963 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 HES6Q96HZ4 224 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 PHF12Q96QT6 1004 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 ASMTLO95671 621 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 IL6P05231 212 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 RARBP10826 455 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 POU1F1P28069 291 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 TAB1Q15750 504 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 ZFP42Q96MM3 310 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 OLFM1Q99784 485 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 DGAT1O75907 488 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 MRPS22P82650 360 aaKnown RBP8.95□□□□□ -0.98
CSMD1-216ENST00000602557 ZNF543Q08ER8 600 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 GPAT2Q6NUI2 795 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 KYQ8NBH2 561 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 BHLHE22Q8NFJ8 381 aaPredicted RBP8.95□□□□□ -0.98
CSMD1-216ENST00000602557 DMRTB1Q96MA1 342 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 KIFC1Q9BW19 673 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 A0A1W2PRG6 482 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 NCF4Q15080 339 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 PGBD2Q6P3X8 592 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 ARHGEF19Q8IW93 802 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 TBC1D19Q8N5T2 526 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 CENPAP49450 140 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 RIBC2Q9H4K1 309 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 SPRP35270 261 aaPredicted RBP8.95□□□□□ -0.98
CSMD1-216ENST00000602557 IST1P53990 364 aa8.95□□□□□ -0.98
CSMD1-216ENST00000602557 ATG9AQ7Z3C6 839 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms