RNA–Protein interactions for RNA: ENST00000601582.1

SYMPK-216, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-216ENST00000601582 ZNF806P0C7X5 589 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 EPB41P11171 864 aaKnown RBP12.32□□□□□ -0.44
SYMPK-216ENST00000601582 RARGP13631 454 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 TRIM21P19474 475 aaKnown RBP12.32□□□□□ -0.44
SYMPK-216ENST00000601582 ATP5C1P36542 298 aaKnown RBP12.32□□□□□ -0.44
SYMPK-216ENST00000601582 EIF2DP41214 584 aaKnown RBP12.32□□□□□ -0.44
SYMPK-216ENST00000601582 GRIA2P42262 883 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 KIR2DL1P43626 348 aaPredicted RBP12.32□□□□□ -0.44
SYMPK-216ENST00000601582 MXI1P50539 228 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 KIF11P52732 1056 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 RAD23BP54727 409 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 MRPS21P82921 87 aaKnown RBP12.32□□□□□ -0.44
SYMPK-216ENST00000601582 ANO4Q32M45 955 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 CBWD6Q4V339 395 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 CBWD3Q5JTY5 395 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 CBWD5Q5RIA9 395 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 ISM2Q6H9L7 571 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 ANO7Q6IWH7 933 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 HTR3DQ70Z44 454 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 SCD5Q86SK9 330 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 RASSF3Q86WH2 238 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 ETFBKMTQ8IXQ9 262 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 SLC4A11Q8NBS3 891 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 MDGA1Q8NFP4 955 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 NETO1Q8TDF5 533 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 CCDC34Q96HJ3 373 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 GSDMAQ96QA5 445 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 DUSP9Q99956 384 aaKnown RBP12.32□□□□□ -0.44
SYMPK-216ENST00000601582 DUSP16Q9BY84 665 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 CISHQ9NSE2 258 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 RMND1Q9NWS8 449 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 SPTBN2O15020 2390 aa12.32□□□□□ -0.44
SYMPK-216ENST00000601582 THADAQ6YHU6 1953 aa12.31□□□□□ -0.44
SYMPK-216ENST00000601582 NCOR2Q9Y618 2525 aa12.31□□□□□ -0.44
SYMPK-216ENST00000601582 TBC1D3BA6NDS4 549 aa12.31□□□□□ -0.44
SYMPK-216ENST00000601582 SLC30A4O14863 429 aa12.31□□□□□ -0.44
SYMPK-216ENST00000601582 ADAM23O75077 832 aa12.31□□□□□ -0.44
SYMPK-216ENST00000601582 TNFRSF4P43489 277 aa12.31□□□□□ -0.44
SYMPK-216ENST00000601582 NUCB2P80303 420 aa12.31□□□□□ -0.44
SYMPK-216ENST00000601582 BECN1Q14457 450 aa12.31□□□□□ -0.44
SYMPK-216ENST00000601582 COBLL1Q53SF7 1204 aa12.31□□□□□ -0.44
SYMPK-216ENST00000601582 DCAF17Q5H9S7 520 aaPredicted RBP12.31□□□□□ -0.44
SYMPK-216ENST00000601582 PLA2G2CQ5R387 149 aa12.31□□□□□ -0.44
SYMPK-216ENST00000601582 TCERG1LQ5VWI1 586 aa12.31□□□□□ -0.44
SYMPK-216ENST00000601582 TTC30AQ86WT1 665 aa12.31□□□□□ -0.44
SYMPK-216ENST00000601582 ZC3H3Q8IXZ2 948 aaKnown RBP12.31□□□□□ -0.44
SYMPK-216ENST00000601582 SPATA20Q8TB22 786 aa12.31□□□□□ -0.44
SYMPK-216ENST00000601582 TMEM176AQ96HP8 235 aa12.31□□□□□ -0.44
SYMPK-216ENST00000601582 PNPLA8Q9NP80 782 aa12.31□□□□□ -0.44
SYMPK-216ENST00000601582 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.31□□□□□ -0.44
SYMPK-216ENST00000601582 NAGPAQ9UK23 515 aa12.31□□□□□ -0.44
SYMPK-216ENST00000601582 HCN2Q9UL51 889 aa12.31□□□□□ -0.44
SYMPK-216ENST00000601582 USP3Q9Y6I4 520 aa12.31□□□□□ -0.44
SYMPK-216ENST00000601582 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.3□□□□□ -0.44
SYMPK-216ENST00000601582 HOXC11O43248 304 aaPredicted RBP12.3□□□□□ -0.44
SYMPK-216ENST00000601582 STX10O60499 249 aa12.3□□□□□ -0.44
SYMPK-216ENST00000601582 SMC2O95347 1197 aa12.3□□□□□ -0.44
SYMPK-216ENST00000601582 BCKDHBP21953 392 aa12.3□□□□□ -0.44
SYMPK-216ENST00000601582 GBP1P32455 592 aa12.3□□□□□ -0.44
SYMPK-216ENST00000601582 MPLP40238 635 aa12.3□□□□□ -0.44
SYMPK-216ENST00000601582 FKBP3Q00688 224 aaKnown RBP12.3□□□□□ -0.44
SYMPK-216ENST00000601582 AASDHQ4L235 1098 aaPredicted RBP12.3□□□□□ -0.44
SYMPK-216ENST00000601582 USP39Q53GS9 565 aaKnown RBP12.3□□□□□ -0.44
SYMPK-216ENST00000601582 C10orf120Q5SQS8 335 aa12.3□□□□□ -0.44
SYMPK-216ENST00000601582 BTBD8Q5XKL5 378 aa12.3□□□□□ -0.44
SYMPK-216ENST00000601582 TCEAL6Q6IPX3 200 aa12.3□□□□□ -0.44
SYMPK-216ENST00000601582 TPGS1Q6ZTW0 290 aa12.3□□□□□ -0.44
SYMPK-216ENST00000601582 FRMD1Q8N878 549 aa12.3□□□□□ -0.44
SYMPK-216ENST00000601582 RLN3Q8WXF3 142 aa12.3□□□□□ -0.44
SYMPK-216ENST00000601582 TCEAL3Q969E4 200 aa12.3□□□□□ -0.44
SYMPK-216ENST00000601582 SMARCE1Q969G3 411 aa12.3□□□□□ -0.44
SYMPK-216ENST00000601582 FAXDC2Q96IV6 333 aa12.3□□□□□ -0.44
SYMPK-216ENST00000601582 CNOT6LQ96LI5 555 aaKnown RBP12.3□□□□□ -0.44
SYMPK-216ENST00000601582 TSG101Q99816 390 aa12.3□□□□□ -0.44
SYMPK-216ENST00000601582 DEC1Q9P2X7 70 aa12.3□□□□□ -0.44
SYMPK-216ENST00000601582 COQ4Q9Y3A0 265 aa12.3□□□□□ -0.44
SYMPK-216ENST00000601582 NUP205Q92621 2012 aa12.3□□□□□ -0.44
SYMPK-216ENST00000601582 NEDD8-MDP1E9PL57 170 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 TULP2O00295 520 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 SLC16A3O15427 465 aaKnown RBP12.29□□□□□ -0.44
SYMPK-216ENST00000601582 RHOBTB1O94844 696 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 KLKB1P03952 638 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 TYRP14679 529 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 CD44P16070 742 aaKnown RBP12.29□□□□□ -0.44
SYMPK-216ENST00000601582 PLA2G4AP47712 749 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 CREB5Q02930 508 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 LRMPQ12912 555 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 ELF2Q15723 593 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 C10orf76Q5T2E6 689 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 ARHGAP17Q68EM7 881 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 KLHDC10Q6PID8 442 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 Q6ZNB5 142 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 CCDC186Q7Z3E2 898 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 PIGZQ86VD9 579 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 MIB1Q86YT6 1006 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 C12orf50Q8NA57 414 aaPredicted RBP12.29□□□□□ -0.44
SYMPK-216ENST00000601582 NDRG1Q92597 394 aaKnown RBP12.29□□□□□ -0.44
SYMPK-216ENST00000601582 SLC35C1Q96A29 364 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 P2RY11Q96G91 374 aa12.29□□□□□ -0.44
SYMPK-216ENST00000601582 TIGD1Q96MW7 591 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms