RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 VCPP55072 806 aaKnown RBP21.06■□□□□ 0.96
SSBP4-210ENST00000601444 STARD6P59095 220 aa21.06■□□□□ 0.96
SSBP4-210ENST00000601444 BPIFB4P59827 614 aa21.06■□□□□ 0.96
SSBP4-210ENST00000601444 MEA1Q16626 185 aa21.06■□□□□ 0.96
SSBP4-210ENST00000601444 CSGALNACT1Q8TDX6 532 aa21.06■□□□□ 0.96
SSBP4-210ENST00000601444 OSCP1Q8WVF1 389 aa21.06■□□□□ 0.96
SSBP4-210ENST00000601444 EDEM1Q92611 657 aa21.06■□□□□ 0.96
SSBP4-210ENST00000601444 KLF16Q9BXK1 252 aaPredicted RBP21.06■□□□□ 0.96
SSBP4-210ENST00000601444 FOXQ1Q9C009 403 aa21.06■□□□□ 0.96
SSBP4-210ENST00000601444 DUS2Q9NX74 493 aaKnown RBP21.06■□□□□ 0.96
SSBP4-210ENST00000601444 COL4A2P08572 1712 aa21.06■□□□□ 0.96
SSBP4-210ENST00000601444 E5RJQ4 531 aa21.05■□□□□ 0.96
SSBP4-210ENST00000601444 RALAP11233 206 aa21.05■□□□□ 0.96
SSBP4-210ENST00000601444 PLCB2Q00722 1185 aa21.05■□□□□ 0.96
SSBP4-210ENST00000601444 EFEMP1Q12805 493 aa21.05■□□□□ 0.96
SSBP4-210ENST00000601444 PDCLQ13371 301 aa21.05■□□□□ 0.96
SSBP4-210ENST00000601444 BSPRYQ5W0U4 402 aa21.05■□□□□ 0.96
SSBP4-210ENST00000601444 SCML4Q8N228 414 aa21.05■□□□□ 0.96
SSBP4-210ENST00000601444 ARHGAP18Q8N392 663 aa21.05■□□□□ 0.96
SSBP4-210ENST00000601444 RNF214Q8ND24 703 aa21.05■□□□□ 0.96
SSBP4-210ENST00000601444 C1orf131Q8NDD1 294 aaKnown RBP21.05■□□□□ 0.96
SSBP4-210ENST00000601444 STK32AQ8WU08 396 aa21.05■□□□□ 0.96
SSBP4-210ENST00000601444 SPAG5Q96R06 1193 aa21.05■□□□□ 0.96
SSBP4-210ENST00000601444 DDX23Q9BUQ8 820 aaKnown RBP21.05■□□□□ 0.96
SSBP4-210ENST00000601444 LHX5Q9H2C1 402 aa21.05■□□□□ 0.96
SSBP4-210ENST00000601444 DNMT3LQ9UJW3 386 aa21.05■□□□□ 0.96
SSBP4-210ENST00000601444 MTF2Q9Y483 593 aaPredicted RBP21.05■□□□□ 0.96
SSBP4-210ENST00000601444 PIAS3Q9Y6X2 628 aa21.05■□□□□ 0.96
SSBP4-210ENST00000601444 TICRRQ7Z2Z1 1910 aa21.05■□□□□ 0.96
SSBP4-210ENST00000601444 PAPSS1O43252 624 aaPredicted RBP21.04■□□□□ 0.96
SSBP4-210ENST00000601444 MMEP08473 750 aa21.04■□□□□ 0.96
SSBP4-210ENST00000601444 STAT1P42224 750 aa21.04■□□□□ 0.96
SSBP4-210ENST00000601444 KPNA1P52294 538 aaPredicted RBP21.04■□□□□ 0.96
SSBP4-210ENST00000601444 PRKCQQ04759 706 aa21.04■□□□□ 0.96
SSBP4-210ENST00000601444 RUNX3Q13761 415 aa21.04■□□□□ 0.96
SSBP4-210ENST00000601444 EML3Q32P44 896 aa21.04■□□□□ 0.96
SSBP4-210ENST00000601444 BTBD8Q5XKL5 378 aa21.04■□□□□ 0.96
SSBP4-210ENST00000601444 KLHDC10Q6PID8 442 aa21.04■□□□□ 0.96
SSBP4-210ENST00000601444 TMEM110Q86TL2 294 aa21.04■□□□□ 0.96
SSBP4-210ENST00000601444 MIB1Q86YT6 1006 aa21.04■□□□□ 0.96
SSBP4-210ENST00000601444 ZNF276Q8N554 614 aa21.04■□□□□ 0.96
SSBP4-210ENST00000601444 EPS8L1Q8TE68 723 aa21.04■□□□□ 0.96
SSBP4-210ENST00000601444 SLC20A1Q8WUM9 679 aa21.04■□□□□ 0.96
SSBP4-210ENST00000601444 CPXM1Q96SM3 734 aa21.04■□□□□ 0.96
SSBP4-210ENST00000601444 RASAL2Q9UJF2 1139 aa21.04■□□□□ 0.96
SSBP4-210ENST00000601444 DAAM1Q9Y4D1 1078 aa21.04■□□□□ 0.96
SSBP4-210ENST00000601444 HELZP42694 1942 aaKnown RBP21.04■□□□□ 0.96
SSBP4-210ENST00000601444 KIF26AQ9ULI4 1882 aaPredicted RBP21.03■□□□□ 0.96
SSBP4-210ENST00000601444 GREM1O60565 184 aa21.03■□□□□ 0.96
SSBP4-210ENST00000601444 CHRNB2P17787 502 aa21.03■□□□□ 0.96
SSBP4-210ENST00000601444 ACADSBP45954 432 aa21.03■□□□□ 0.96
SSBP4-210ENST00000601444 IFNAR2P48551 515 aa21.03■□□□□ 0.96
SSBP4-210ENST00000601444 UBASH3AP57075 661 aa21.03■□□□□ 0.96
SSBP4-210ENST00000601444 ARID5AQ03989 594 aa21.03■□□□□ 0.96
SSBP4-210ENST00000601444 PDGFRLQ15198 375 aa21.03■□□□□ 0.96
SSBP4-210ENST00000601444 ITPRIPL2Q3MIP1 535 aa21.03■□□□□ 0.96
SSBP4-210ENST00000601444 ASTLQ6HA08 431 aaPredicted RBP21.03■□□□□ 0.96
SSBP4-210ENST00000601444 SUGP1Q8IWZ8 645 aaKnown RBP21.03■□□□□ 0.96
SSBP4-210ENST00000601444 TMEM105Q8N8V8 129 aa21.03■□□□□ 0.96
SSBP4-210ENST00000601444 IRGQQ8WZA9 623 aa21.03■□□□□ 0.96
SSBP4-210ENST00000601444 CHFRQ96EP1 664 aa21.03■□□□□ 0.96
SSBP4-210ENST00000601444 SHDQ96IW2 340 aa21.03■□□□□ 0.96
SSBP4-210ENST00000601444 PPP1R13BQ96KQ4 1090 aa21.03■□□□□ 0.96
SSBP4-210ENST00000601444 PDCL3Q9H2J4 239 aa21.03■□□□□ 0.96
SSBP4-210ENST00000601444 NOCTQ9UK39 431 aaKnown RBP21.03■□□□□ 0.96
SSBP4-210ENST00000601444 A0A1W2PQC6 194 aa21.02■□□□□ 0.96
SSBP4-210ENST00000601444 KANSL1LA0AUZ9 987 aa21.02■□□□□ 0.96
SSBP4-210ENST00000601444 SPECC1L-ADORA2AF8WAN1 911 aa21.02■□□□□ 0.96
SSBP4-210ENST00000601444 FBXO21O94952 628 aa21.02■□□□□ 0.96
SSBP4-210ENST00000601444 HMBSP08397 361 aa21.02■□□□□ 0.96
SSBP4-210ENST00000601444 ZNF445P59923 1031 aa21.02■□□□□ 0.96
SSBP4-210ENST00000601444 TXNDC11Q6PKC3 985 aa21.02■□□□□ 0.96
SSBP4-210ENST00000601444 RSRC2Q7L4I2 434 aaKnown RBP21.02■□□□□ 0.96
SSBP4-210ENST00000601444 CACNA2D4Q7Z3S7 1137 aa21.02■□□□□ 0.96
SSBP4-210ENST00000601444 DDX42Q86XP3 938 aaKnown RBP eCLIP21.02■□□□□ 0.96
SSBP4-210ENST00000601444 ADGRG2Q8IZP9 1017 aa21.02■□□□□ 0.96
SSBP4-210ENST00000601444 BAP1Q92560 729 aa21.02■□□□□ 0.96
SSBP4-210ENST00000601444 PIWIL1Q96J94 861 aaKnown RBP21.02■□□□□ 0.96
SSBP4-210ENST00000601444 ECT2Q9H8V3 914 aa21.02■□□□□ 0.96
SSBP4-210ENST00000601444 ABCC13Q9NSE7 274 aa21.02■□□□□ 0.96
SSBP4-210ENST00000601444 IFNKQ9P0W0 207 aa21.02■□□□□ 0.96
SSBP4-210ENST00000601444 SFMBT1Q9UHJ3 866 aa21.02■□□□□ 0.96
SSBP4-210ENST00000601444 SH3BP1Q9Y3L3 701 aa21.02■□□□□ 0.96
SSBP4-210ENST00000601444 E2F8A0AVK6 867 aa21.01■□□□□ 0.95
SSBP4-210ENST00000601444 LTFP02788 710 aa21.01■□□□□ 0.95
SSBP4-210ENST00000601444 ERBB2P04626 1255 aa21.01■□□□□ 0.95
SSBP4-210ENST00000601444 FYNP06241 537 aa21.01■□□□□ 0.95
SSBP4-210ENST00000601444 DCNP07585 359 aaKnown RBP21.01■□□□□ 0.95
SSBP4-210ENST00000601444 AOC1P19801 751 aa21.01■□□□□ 0.95
SSBP4-210ENST00000601444 TARSP26639 723 aaKnown RBP21.01■□□□□ 0.95
SSBP4-210ENST00000601444 AVPR2P30518 371 aa21.01■□□□□ 0.95
SSBP4-210ENST00000601444 CLCN5P51795 746 aa21.01■□□□□ 0.95
SSBP4-210ENST00000601444 UBXN2BQ14CS0 331 aa21.01■□□□□ 0.95
SSBP4-210ENST00000601444 TAF5Q15542 800 aa21.01■□□□□ 0.95
SSBP4-210ENST00000601444 PTPN20Q4JDL3 420 aa21.01■□□□□ 0.95
SSBP4-210ENST00000601444 ZNF852Q6ZMS4 543 aa21.01■□□□□ 0.95
SSBP4-210ENST00000601444 TADA2BQ86TJ2 420 aa21.01■□□□□ 0.95
SSBP4-210ENST00000601444 BBS7Q8IWZ6 715 aa21.01■□□□□ 0.95
SSBP4-210ENST00000601444 FAM3CQ92520 227 aa21.01■□□□□ 0.95
SSBP4-210ENST00000601444 CDK5RAP1Q96SZ6 601 aaKnown RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms