RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 PTGER3P43115 390 aa19.01■□□□□ 0.63
CHMP2A-208ENST00000601220 DHPSP49366 369 aaPredicted RBP19.01■□□□□ 0.63
CHMP2A-208ENST00000601220 NFIL3Q16649 462 aa19.01■□□□□ 0.63
CHMP2A-208ENST00000601220 PSAPL1Q6NUJ1 521 aa19.01■□□□□ 0.63
CHMP2A-208ENST00000601220 TERB1Q8NA31 727 aa19.01■□□□□ 0.63
CHMP2A-208ENST00000601220 HMGB4Q8WW32 186 aa19.01■□□□□ 0.63
CHMP2A-208ENST00000601220 P2RY11Q96G91 374 aa19.01■□□□□ 0.63
CHMP2A-208ENST00000601220 NMUR1Q9HB89 426 aa19.01■□□□□ 0.63
CHMP2A-208ENST00000601220 TLR8Q9NR97 1041 aaKnown RBP19.01■□□□□ 0.63
CHMP2A-208ENST00000601220 DEC1Q9P2X7 70 aa19.01■□□□□ 0.63
CHMP2A-208ENST00000601220 EVLQ9UI08 416 aaPredicted RBP19.01■□□□□ 0.63
CHMP2A-208ENST00000601220 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 A0A1W2PQF6 199 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 TCRBV21S2A2A0A5A6 115 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 RHOBTB3O94955 611 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 PRR29P0C7W0 189 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 IRF1P10914 325 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 ADORA2BP29275 332 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 VAMP7P51809 220 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 PPP3CAQ08209 521 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 SPDYCQ5MJ68 293 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 BTBD8Q5XKL5 378 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 CEP135Q66GS9 1140 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 LPCAT2Q7L5N7 544 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 TMEFF1Q8IYR6 380 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 ZNF513Q8N8E2 541 aaPredicted RBP19■□□□□ 0.63
CHMP2A-208ENST00000601220 SPRYD3Q8NCJ5 442 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 TAS1R2Q8TE23 839 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 PIGKQ92643 395 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 TMEM9BQ9NQ34 198 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19■□□□□ 0.63
CHMP2A-208ENST00000601220 MARK1Q9P0L2 795 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 WASF3Q9UPY6 502 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 FRMD4BQ9Y2L6 1034 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 USP24Q9UPU5 2620 aa19■□□□□ 0.63
CHMP2A-208ENST00000601220 MYOFQ9NZM1 2061 aa18.99■□□□□ 0.63
CHMP2A-208ENST00000601220 CYP26A1O43174 497 aa18.99■□□□□ 0.63
CHMP2A-208ENST00000601220 CALUO43852 315 aaPredicted RBP18.99■□□□□ 0.63
CHMP2A-208ENST00000601220 CACNG3O60359 315 aa18.99■□□□□ 0.63
CHMP2A-208ENST00000601220 CLSTN1O94985 981 aa18.99■□□□□ 0.63
CHMP2A-208ENST00000601220 CISD3P0C7P0 127 aa18.99■□□□□ 0.63
CHMP2A-208ENST00000601220 FAM200BP0CF97 657 aa18.99■□□□□ 0.63
CHMP2A-208ENST00000601220 GABRG2P18507 467 aa18.99■□□□□ 0.63
CHMP2A-208ENST00000601220 ATP5C1P36542 298 aaKnown RBP18.99■□□□□ 0.63
CHMP2A-208ENST00000601220 PIK3CAP42336 1068 aa18.99■□□□□ 0.63
CHMP2A-208ENST00000601220 GCLMP48507 274 aa18.99■□□□□ 0.63
CHMP2A-208ENST00000601220 ANO4Q32M45 955 aa18.99■□□□□ 0.63
CHMP2A-208ENST00000601220 C10orf76Q5T2E6 689 aa18.99■□□□□ 0.63
CHMP2A-208ENST00000601220 PEAR1Q5VY43 1037 aaPredicted RBP18.99■□□□□ 0.63
CHMP2A-208ENST00000601220 KLHDC10Q6PID8 442 aa18.99■□□□□ 0.63
CHMP2A-208ENST00000601220 SCD5Q86SK9 330 aa18.99■□□□□ 0.63
CHMP2A-208ENST00000601220 CYFIP2Q96F07 1278 aa18.99■□□□□ 0.63
CHMP2A-208ENST00000601220 CYP3A43Q9HB55 503 aa18.99■□□□□ 0.63
CHMP2A-208ENST00000601220 PNPLA8Q9NP80 782 aa18.99■□□□□ 0.63
CHMP2A-208ENST00000601220 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.99■□□□□ 0.63
CHMP2A-208ENST00000601220 CILPO75339 1184 aa18.98■□□□□ 0.63
CHMP2A-208ENST00000601220 HSP90AA1P07900 732 aaKnown RBP18.98■□□□□ 0.63
CHMP2A-208ENST00000601220 TRIM49P0CI25 452 aa18.98■□□□□ 0.63
CHMP2A-208ENST00000601220 TRIM49CP0CI26 452 aa18.98■□□□□ 0.63
CHMP2A-208ENST00000601220 NOVA1P51513 510 aaKnown RBP18.98■□□□□ 0.63
CHMP2A-208ENST00000601220 NDUFA8P51970 172 aa18.98■□□□□ 0.63
CHMP2A-208ENST00000601220 KIF11P52732 1056 aa18.98■□□□□ 0.63
CHMP2A-208ENST00000601220 ENPEPQ07075 957 aa18.98■□□□□ 0.63
CHMP2A-208ENST00000601220 DPYDQ12882 1025 aa18.98■□□□□ 0.63
CHMP2A-208ENST00000601220 PREPLQ4J6C6 727 aaPredicted RBP18.98■□□□□ 0.63
CHMP2A-208ENST00000601220 DAB2IPQ5VWQ8 1189 aa18.98■□□□□ 0.63
CHMP2A-208ENST00000601220 EGFLAMQ63HQ2 1017 aa18.98■□□□□ 0.63
CHMP2A-208ENST00000601220 Q6ZNB5 142 aa18.98■□□□□ 0.63
CHMP2A-208ENST00000601220 TRMT11Q7Z4G4 463 aaKnown RBP18.98■□□□□ 0.63
CHMP2A-208ENST00000601220 SYT12Q8IV01 421 aa18.98■□□□□ 0.63
CHMP2A-208ENST00000601220 ZNF276Q8N554 614 aa18.98■□□□□ 0.63
CHMP2A-208ENST00000601220 ACOX2Q99424 681 aa18.98■□□□□ 0.63
CHMP2A-208ENST00000601220 NT5C1AQ9BXI3 368 aa18.98■□□□□ 0.63
CHMP2A-208ENST00000601220 NACA2Q9H009 215 aa18.98■□□□□ 0.63
CHMP2A-208ENST00000601220 BCCIPQ9P287 314 aaKnown RBP eCLIP18.98■□□□□ 0.63
CHMP2A-208ENST00000601220 USP3Q9Y6I4 520 aa18.98■□□□□ 0.63
CHMP2A-208ENST00000601220 A0A1W2PQH9 124 aa18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 PRRT4C9JH25 899 aa18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 MDM4O15151 490 aa18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 MAP3K13O43283 966 aa18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 TYRP14679 529 aa18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 CSRP1P21291 193 aaKnown RBP18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 ACO1P21399 889 aaKnown RBP18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 NR2F2P24468 414 aa18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 NTSR1P30989 418 aa18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 BYSLQ13895 437 aaKnown RBP18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 ZCWPW2Q504Y3 356 aa18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 TRIM61Q5EBN2 209 aa18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 SH3PXD2AQ5TCZ1 1133 aa18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 GRAMD4Q6IC98 578 aa18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 TOGARAM2Q6ZUX3 1019 aa18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 INTS8Q75QN2 995 aaKnown RBP18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 ARMCX6Q7L4S7 300 aa18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 SPACA7Q96KW9 195 aa18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 DNAJC17Q9NVM6 304 aaKnown RBP18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 FBXO10Q9UK96 956 aa18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 PILRBQ9UKJ0 227 aa18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 NUDT5Q9UKK9 219 aa18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 PCDHA5Q9Y5H7 936 aa18.97■□□□□ 0.63
CHMP2A-208ENST00000601220 NEDD8-MDP1E9PL57 170 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms