RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 ATP5C1P36542 298 aaKnown RBP17.94■□□□□ 0.46
SCAF1-204ENST00000601038 MCCD1P59942 119 aaPredicted RBP17.94■□□□□ 0.46
SCAF1-204ENST00000601038 ADAM9Q13443 819 aa17.94■□□□□ 0.46
SCAF1-204ENST00000601038 ANO4Q32M45 955 aa17.94■□□□□ 0.46
SCAF1-204ENST00000601038 RNF43Q68DV7 783 aa17.94■□□□□ 0.46
SCAF1-204ENST00000601038 TCEAL6Q6IPX3 200 aa17.94■□□□□ 0.46
SCAF1-204ENST00000601038 NUDT18Q6ZVK8 323 aa17.94■□□□□ 0.46
SCAF1-204ENST00000601038 GPRIN1Q7Z2K8 1008 aa17.94■□□□□ 0.46
SCAF1-204ENST00000601038 TTC30AQ86WT1 665 aa17.94■□□□□ 0.46
SCAF1-204ENST00000601038 TMEM25Q86YD3 366 aa17.94■□□□□ 0.46
SCAF1-204ENST00000601038 FAM186BQ8IYM0 893 aa17.94■□□□□ 0.46
SCAF1-204ENST00000601038 NAT16Q8N8M0 369 aa17.94■□□□□ 0.46
SCAF1-204ENST00000601038 TCEAL3Q969E4 200 aa17.94■□□□□ 0.46
SCAF1-204ENST00000601038 NIF3L1Q9GZT8 377 aa17.94■□□□□ 0.46
SCAF1-204ENST00000601038 PCDHA5Q9Y5H7 936 aa17.94■□□□□ 0.46
SCAF1-204ENST00000601038 THADAQ6YHU6 1953 aa17.93■□□□□ 0.46
SCAF1-204ENST00000601038 TPRP12270 2363 aaKnown RBP17.93■□□□□ 0.46
SCAF1-204ENST00000601038 GREM1O60565 184 aa17.93■□□□□ 0.46
SCAF1-204ENST00000601038 ADAM23O75077 832 aa17.93■□□□□ 0.46
SCAF1-204ENST00000601038 CILPO75339 1184 aa17.93■□□□□ 0.46
SCAF1-204ENST00000601038 ZNF202O95125 648 aa17.93■□□□□ 0.46
SCAF1-204ENST00000601038 TBX18O95935 607 aa17.93■□□□□ 0.46
SCAF1-204ENST00000601038 IRF1P10914 325 aa17.93■□□□□ 0.46
SCAF1-204ENST00000601038 ACO1P21399 889 aaKnown RBP17.93■□□□□ 0.46
SCAF1-204ENST00000601038 BCKDHBP21953 392 aa17.93■□□□□ 0.46
SCAF1-204ENST00000601038 GOLGA8FQ08AF8 430 aa17.93■□□□□ 0.46
SCAF1-204ENST00000601038 GOLGA8DPQ0D2H9 430 aa17.93■□□□□ 0.46
SCAF1-204ENST00000601038 KLHDC10Q6PID8 442 aa17.93■□□□□ 0.46
SCAF1-204ENST00000601038 CCDC150Q8NCX0 1101 aa17.93■□□□□ 0.46
SCAF1-204ENST00000601038 WHAMMQ8TF30 809 aa17.93■□□□□ 0.46
SCAF1-204ENST00000601038 LSM14BQ9BX40 385 aaKnown RBP17.93■□□□□ 0.46
SCAF1-204ENST00000601038 DNAI2Q9GZS0 605 aa17.93■□□□□ 0.46
SCAF1-204ENST00000601038 TMEM8AQ9HCN3 771 aa17.93■□□□□ 0.46
SCAF1-204ENST00000601038 OSER1Q9NX31 292 aa17.93■□□□□ 0.46
SCAF1-204ENST00000601038 NUP205Q92621 2012 aa17.93■□□□□ 0.46
SCAF1-204ENST00000601038 CNOT1A5YKK6 2376 aaKnown RBP17.93■□□□□ 0.46
SCAF1-204ENST00000601038 CYP26A1O43174 497 aa17.92■□□□□ 0.46
SCAF1-204ENST00000601038 GTF2H1P32780 548 aa17.92■□□□□ 0.46
SCAF1-204ENST00000601038 P2RY2P41231 377 aa17.92■□□□□ 0.46
SCAF1-204ENST00000601038 EDRF1Q3B7T1 1238 aa17.92■□□□□ 0.46
SCAF1-204ENST00000601038 ZCWPW2Q504Y3 356 aa17.92■□□□□ 0.46
SCAF1-204ENST00000601038 KRT39Q6A163 491 aa17.92■□□□□ 0.46
SCAF1-204ENST00000601038 TRMT11Q7Z4G4 463 aaKnown RBP17.92■□□□□ 0.46
SCAF1-204ENST00000601038 TERB1Q8NA31 727 aa17.92■□□□□ 0.46
SCAF1-204ENST00000601038 JAKMIP2Q96AA8 810 aa17.92■□□□□ 0.46
SCAF1-204ENST00000601038 FAXDC2Q96IV6 333 aa17.92■□□□□ 0.46
SCAF1-204ENST00000601038 EDEM2Q9BV94 578 aa17.92■□□□□ 0.46
SCAF1-204ENST00000601038 GOLPH3LQ9H4A5 285 aa17.92■□□□□ 0.46
SCAF1-204ENST00000601038 LSM7Q9UK45 103 aaKnown RBP17.92■□□□□ 0.46
SCAF1-204ENST00000601038 KHNYNO15037 678 aaKnown RBP17.91■□□□□ 0.46
SCAF1-204ENST00000601038 CD58P19256 250 aa17.91■□□□□ 0.46
SCAF1-204ENST00000601038 KCNA4P22459 653 aa17.91■□□□□ 0.46
SCAF1-204ENST00000601038 PLA2G4AP47712 749 aa17.91■□□□□ 0.46
SCAF1-204ENST00000601038 KIF11P52732 1056 aa17.91■□□□□ 0.46
SCAF1-204ENST00000601038 BYSLQ13895 437 aaKnown RBP17.91■□□□□ 0.46
SCAF1-204ENST00000601038 C10orf76Q5T2E6 689 aa17.91■□□□□ 0.46
SCAF1-204ENST00000601038 CYP2U1Q7Z449 544 aa17.91■□□□□ 0.46
SCAF1-204ENST00000601038 ZNF276Q8N554 614 aa17.91■□□□□ 0.46
SCAF1-204ENST00000601038 ZNF513Q8N8E2 541 aaPredicted RBP17.91■□□□□ 0.46
SCAF1-204ENST00000601038 HMGB4Q8WW32 186 aa17.91■□□□□ 0.46
SCAF1-204ENST00000601038 RLN3Q8WXF3 142 aa17.91■□□□□ 0.46
SCAF1-204ENST00000601038 SPACA7Q96KW9 195 aa17.91■□□□□ 0.46
SCAF1-204ENST00000601038 XPO6Q96QU8 1125 aaKnown RBP17.91■□□□□ 0.46
SCAF1-204ENST00000601038 DUSP16Q9BY84 665 aa17.91■□□□□ 0.46
SCAF1-204ENST00000601038 MMRN2Q9H8L6 949 aa17.91■□□□□ 0.46
SCAF1-204ENST00000601038 NMUR1Q9HB89 426 aa17.91■□□□□ 0.46
SCAF1-204ENST00000601038 ZDHHC4Q9NPG8 344 aa17.91■□□□□ 0.46
SCAF1-204ENST00000601038 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.91■□□□□ 0.46
SCAF1-204ENST00000601038 MARK1Q9P0L2 795 aa17.91■□□□□ 0.46
SCAF1-204ENST00000601038 BCCIPQ9P287 314 aaKnown RBP eCLIP17.91■□□□□ 0.46
SCAF1-204ENST00000601038 WDR35Q9P2L0 1181 aa17.91■□□□□ 0.46
SCAF1-204ENST00000601038 DNMT3LQ9UJW3 386 aa17.91■□□□□ 0.46
SCAF1-204ENST00000601038 STARD13Q9Y3M8 1113 aa17.91■□□□□ 0.46
SCAF1-204ENST00000601038 A0A1W2PQH9 124 aa17.9■□□□□ 0.46
SCAF1-204ENST00000601038 TCRBV21S2A2A0A5A6 115 aa17.9■□□□□ 0.46
SCAF1-204ENST00000601038 LNP1A1A4G5 178 aa17.9■□□□□ 0.46
SCAF1-204ENST00000601038 MAP3K13O43283 966 aa17.9■□□□□ 0.46
SCAF1-204ENST00000601038 CACNG3O60359 315 aa17.9■□□□□ 0.46
SCAF1-204ENST00000601038 RARGP13631 454 aa17.9■□□□□ 0.46
SCAF1-204ENST00000601038 DHPSP49366 369 aaPredicted RBP17.9■□□□□ 0.46
SCAF1-204ENST00000601038 PSEN1P49768 467 aa17.9■□□□□ 0.46
SCAF1-204ENST00000601038 PPP1R26Q5T8A7 1209 aaPredicted RBP17.9■□□□□ 0.46
SCAF1-204ENST00000601038 N4BP2L1Q5TBK1 243 aaPredicted RBP17.9■□□□□ 0.46
SCAF1-204ENST00000601038 GRAMD4Q6IC98 578 aa17.9■□□□□ 0.46
SCAF1-204ENST00000601038 LPCAT2Q7L5N7 544 aa17.9■□□□□ 0.46
SCAF1-204ENST00000601038 CCDC186Q7Z3E2 898 aa17.9■□□□□ 0.46
SCAF1-204ENST00000601038 TADA2BQ86TJ2 420 aa17.9■□□□□ 0.46
SCAF1-204ENST00000601038 TTC39CQ8N584 583 aa17.9■□□□□ 0.46
SCAF1-204ENST00000601038 CCDC34Q96HJ3 373 aa17.9■□□□□ 0.46
SCAF1-204ENST00000601038 BBS2Q9BXC9 721 aa17.9■□□□□ 0.46
SCAF1-204ENST00000601038 DNAJC17Q9NVM6 304 aaKnown RBP17.9■□□□□ 0.46
SCAF1-204ENST00000601038 HCN2Q9UL51 889 aa17.9■□□□□ 0.46
SCAF1-204ENST00000601038 USP3Q9Y6I4 520 aa17.9■□□□□ 0.46
SCAF1-204ENST00000601038 C4orf47A7E2U8 309 aa17.89■□□□□ 0.45
SCAF1-204ENST00000601038 NEDD8-MDP1E9PL57 170 aa17.89■□□□□ 0.45
SCAF1-204ENST00000601038 TRIM24O15164 1050 aa17.89■□□□□ 0.45
SCAF1-204ENST00000601038 KCNK5O95279 499 aa17.89■□□□□ 0.45
SCAF1-204ENST00000601038 TYRP14679 529 aa17.89■□□□□ 0.45
SCAF1-204ENST00000601038 MAP7D1Q3KQU3 841 aa17.89■□□□□ 0.45
SCAF1-204ENST00000601038 SPDYCQ5MJ68 293 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms