RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 FAM102AQ5T9C2 384 aaPredicted RBP20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 BTBD8Q5XKL5 378 aa20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 TOGARAM2Q6ZUX3 1019 aa20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 SLC26A9Q7LBE3 791 aa20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 ARHGAP18Q8N392 663 aa20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 MAB21L3Q8N8X9 362 aa20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 ZNF653Q96CK0 615 aa20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 VCPIP1Q96JH7 1222 aa20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 PPP1R9BQ96SB3 815 aa20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 RNF38Q9H0F5 515 aa20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 METTL5Q9NRN9 209 aaKnown RBP20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 ASNSD1Q9NWL6 643 aa20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 CLIC5Q9NZA1 410 aa20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 WDR35Q9P2L0 1181 aa20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 CDH7Q9ULB5 785 aa20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 STRIP2Q9ULQ0 834 aa20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 EPN1Q9Y6I3 576 aaPredicted RBP20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 DOCK8Q8NF50 2099 aa20.97■□□□□ 0.95
SHKBP1-222ENST00000600320 MDM4O15151 490 aa20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 COCHO43405 550 aa20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 TLR5O60602 858 aa20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 NDUFA10O95299 355 aa20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 OLFM2O95897 454 aa20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 TBX18O95935 607 aa20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 SP100P23497 879 aaPredicted RBP20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 CYLC1P35663 651 aaPredicted RBP20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 SCNN1AP37088 669 aa20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 PSEN1P49768 467 aa20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 CCZ1BP86790 482 aa20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 CCZ1P86791 482 aaPredicted RBP20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 HECTD3Q5T447 861 aa20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 TRNP1Q6NT89 227 aa20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 ARL14EPQ8N8R7 260 aaPredicted RBP20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 JOSD2Q8TAC2 188 aa20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 ARHGEF26Q96DR7 871 aa20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 CYP2S1Q96SQ9 504 aa20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 THAP2Q9H0W7 228 aa20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 CNOT8Q9UFF9 292 aaKnown RBP20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 TMEM59LQ9UK28 342 aa20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 NAALADL1Q9UQQ1 740 aa20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 REXO2Q9Y3B8 237 aaKnown RBP20.96■□□□□ 0.95
SHKBP1-222ENST00000600320 EIF3CLB5ME19 914 aaKnown RBP20.95■□□□□ 0.94
SHKBP1-222ENST00000600320 HSF2BPO75031 334 aa20.95■□□□□ 0.94
SHKBP1-222ENST00000600320 GLI1P08151 1106 aa20.95■□□□□ 0.94
SHKBP1-222ENST00000600320 RALAP11233 206 aa20.95■□□□□ 0.94
SHKBP1-222ENST00000600320 DDX6P26196 483 aaKnown RBP eCLIP20.95■□□□□ 0.94
SHKBP1-222ENST00000600320 GBP2P32456 591 aaPredicted RBP20.95■□□□□ 0.94
SHKBP1-222ENST00000600320 TUBP50607 506 aa20.95■□□□□ 0.94
SHKBP1-222ENST00000600320 YWHAZP63104 245 aaKnown RBP20.95■□□□□ 0.94
SHKBP1-222ENST00000600320 CCDC173Q0VFZ6 552 aa20.95■□□□□ 0.94
SHKBP1-222ENST00000600320 PUS10Q3MIT2 529 aaKnown RBP20.95■□□□□ 0.94
SHKBP1-222ENST00000600320 EFHC1Q5JVL4 640 aa20.95■□□□□ 0.94
SHKBP1-222ENST00000600320 SYPL2Q5VXT5 272 aa20.95■□□□□ 0.94
SHKBP1-222ENST00000600320 PLEKHA7Q6IQ23 1121 aa20.95■□□□□ 0.94
SHKBP1-222ENST00000600320 DEFB106AQ8N104 65 aa20.95■□□□□ 0.94
SHKBP1-222ENST00000600320 C3orf20Q8ND61 904 aa20.95■□□□□ 0.94
SHKBP1-222ENST00000600320 ST13P5Q8NFI4 369 aaPredicted RBP20.95■□□□□ 0.94
SHKBP1-222ENST00000600320 SLC2A13Q96QE2 648 aa20.95■□□□□ 0.94
SHKBP1-222ENST00000600320 EIF3CQ99613 913 aaKnown RBP20.95■□□□□ 0.94
SHKBP1-222ENST00000600320 SMG9Q9H0W8 520 aaKnown RBP20.95■□□□□ 0.94
SHKBP1-222ENST00000600320 SLITRK6Q9H5Y7 841 aa20.95■□□□□ 0.94
SHKBP1-222ENST00000600320 ABCC13Q9NSE7 274 aa20.95■□□□□ 0.94
SHKBP1-222ENST00000600320 DAB1O75553 588 aa20.94■□□□□ 0.94
SHKBP1-222ENST00000600320 PTMAP06454 111 aaKnown RBP20.94■□□□□ 0.94
SHKBP1-222ENST00000600320 H2AFZP0C0S5 128 aa20.94■□□□□ 0.94
SHKBP1-222ENST00000600320 HDCP19113 662 aa20.94■□□□□ 0.94
SHKBP1-222ENST00000600320 FLT3P36888 993 aa20.94■□□□□ 0.94
SHKBP1-222ENST00000600320 RNASE9P60153 205 aaKnown RBP20.94■□□□□ 0.94
SHKBP1-222ENST00000600320 PITX1P78337 314 aaPredicted RBP20.94■□□□□ 0.94
SHKBP1-222ENST00000600320 PPP1R15BQ5SWA1 713 aa20.94■□□□□ 0.94
SHKBP1-222ENST00000600320 DNAJC24Q6P3W2 148 aa20.94■□□□□ 0.94
SHKBP1-222ENST00000600320 H2AFVQ71UI9 128 aa20.94■□□□□ 0.94
SHKBP1-222ENST00000600320 ZNF276Q8N554 614 aa20.94■□□□□ 0.94
SHKBP1-222ENST00000600320 EMC1Q8N766 993 aa20.94■□□□□ 0.94
SHKBP1-222ENST00000600320 ACRBPQ8NEB7 543 aa20.94■□□□□ 0.94
SHKBP1-222ENST00000600320 GOLGA1Q92805 767 aa20.94■□□□□ 0.94
SHKBP1-222ENST00000600320 SELENOOQ9BVL4 669 aa20.94■□□□□ 0.94
SHKBP1-222ENST00000600320 PHF7Q9BWX1 381 aaPredicted RBP20.94■□□□□ 0.94
SHKBP1-222ENST00000600320 POPDC2Q9HBU9 364 aa20.94■□□□□ 0.94
SHKBP1-222ENST00000600320 MYO1AQ9UBC5 1043 aa20.94■□□□□ 0.94
SHKBP1-222ENST00000600320 TRAV19A0A0A6YYK7 116 aa20.93■□□□□ 0.94
SHKBP1-222ENST00000600320 ANKRD62A6NC57 917 aa20.93■□□□□ 0.94
SHKBP1-222ENST00000600320 C2CD4DB7Z1M9 353 aa20.93■□□□□ 0.94
SHKBP1-222ENST00000600320 PRAMEF12O95522 483 aa20.93■□□□□ 0.94
SHKBP1-222ENST00000600320 MYBL1P10243 752 aa20.93■□□□□ 0.94
SHKBP1-222ENST00000600320 NCAM1P13591 858 aa20.93■□□□□ 0.94
SHKBP1-222ENST00000600320 MAGEA1P43355 309 aa20.93■□□□□ 0.94
SHKBP1-222ENST00000600320 MAMLD1Q13495 774 aa20.93■□□□□ 0.94
SHKBP1-222ENST00000600320 FAM78AQ5JUQ0 283 aa20.93■□□□□ 0.94
SHKBP1-222ENST00000600320 C10orf120Q5SQS8 335 aa20.93■□□□□ 0.94
SHKBP1-222ENST00000600320 MSANTD2Q6P1R3 559 aa20.93■□□□□ 0.94
SHKBP1-222ENST00000600320 BEND5Q7L4P6 421 aa20.93■□□□□ 0.94
SHKBP1-222ENST00000600320 CMTM8Q8IZV2 173 aa20.93■□□□□ 0.94
SHKBP1-222ENST00000600320 CCDC112Q8NEF3 446 aa20.93■□□□□ 0.94
SHKBP1-222ENST00000600320 ZSCAN18Q8TBC5 510 aaPredicted RBP20.93■□□□□ 0.94
SHKBP1-222ENST00000600320 TRIM11Q96F44 468 aa20.93■□□□□ 0.94
SHKBP1-222ENST00000600320 KCNF1Q9H3M0 494 aa20.93■□□□□ 0.94
SHKBP1-222ENST00000600320 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.93■□□□□ 0.941e-8■■■■■ 45.1
SHKBP1-222ENST00000600320 SFMBT1Q9UHJ3 866 aa20.93■□□□□ 0.94
SHKBP1-222ENST00000600320 TFR2Q9UP52 801 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms