RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 TUBP50607 506 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 MYL6P60660 151 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 CLDN10P78369 228 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 CYP24A1Q07973 514 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 ENPP2Q13822 863 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 HNRNPDQ14103 355 aaKnown RBP6.48□□□□□ -1.37
VRK3-220ENST00000600259 SLC39A14Q15043 492 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 TRIP6Q15654 476 aaKnown RBP6.48□□□□□ -1.37
VRK3-220ENST00000600259 E2F4Q16254 413 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 C10orf76Q5T2E6 689 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 CNNM4Q6P4Q7 775 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 CCDC73Q6ZRK6 1079 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 TOGARAM2Q6ZUX3 1019 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 HS2ST1Q7LGA3 356 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 GLRX5Q86SX6 157 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 METTL3Q86U44 580 aaKnown RBP6.48□□□□□ -1.37
VRK3-220ENST00000600259 FUKQ8N0W3 1084 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 CRYBG2Q8N1P7 616 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 PGBD3Q8N328 593 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 HDDC3Q8N4P3 179 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 PNPLA1Q8N8W4 532 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 RDH13Q8NBN7 331 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 PDZD8Q8NEN9 1154 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 C1orf216Q8TAB5 229 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 NOC3LQ8WTT2 800 aaKnown RBP6.48□□□□□ -1.37
VRK3-220ENST00000600259 SCFD1Q8WVM8 642 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 FBXO32Q969P5 355 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 ELMO3Q96BJ8 720 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 MRGPRX1Q96LB2 322 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 USP28Q96RU2 1077 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 CGRRF1Q99675 332 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 SMOQ99835 787 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 GTPBP2Q9BX10 602 aaKnown RBP6.48□□□□□ -1.37
VRK3-220ENST00000600259 SLC6A17Q9H1V8 727 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 SNX25Q9H3E2 840 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 CSNK1G1Q9HCP0 422 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 AGPAT3Q9NRZ7 376 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 COMMD8Q9NX08 183 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 OSER1Q9NX31 292 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 MARK1Q9P0L2 795 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 GMIPQ9P107 970 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 BCCIPQ9P287 314 aaKnown RBP eCLIP6.48□□□□□ -1.37
VRK3-220ENST00000600259 CIZ1Q9ULV3 898 aaPredicted RBP6.48□□□□□ -1.37
VRK3-220ENST00000600259 PLXND1Q9Y4D7 1925 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 LOC400499M0QZD8 3231 aa6.48□□□□□ -1.37
VRK3-220ENST00000600259 CELSR3Q9NYQ7 3312 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 A8MXQ7 604 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 KCNJ18B7U540 433 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 HHLA1C9JL84 531 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 GFRA2O00451 464 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 CLIC2O15247 247 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 EIF3DO15371 548 aaKnown RBP eCLIP6.47□□□□□ -1.37
VRK3-220ENST00000600259 TLR5O60602 858 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 ZNF217O75362 1048 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 VNN1O95497 513 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 KLKB1P03952 638 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 C4BPAP04003 597 aaKnown RBP6.47□□□□□ -1.37
VRK3-220ENST00000600259 SYPP08247 313 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 FTH1P19P0C7X4 201 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 DLATP10515 647 aaKnown RBP6.47□□□□□ -1.37
VRK3-220ENST00000600259 TYRP14679 529 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 TNNI1P19237 187 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 ACO1P21399 889 aaKnown RBP6.47□□□□□ -1.37
VRK3-220ENST00000600259 ATICP31939 592 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 STAT6P42226 847 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 CASP4P49662 377 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 SLC5A3P53794 718 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 ATXN3P54252 364 aaPredicted RBP6.47□□□□□ -1.37
VRK3-220ENST00000600259 SNRNP35Q16560 246 aaKnown RBP6.47□□□□□ -1.37
VRK3-220ENST00000600259 BTBD8Q5XKL5 378 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 C19orf48Q6RUI8 117 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 Q6ZNB5 142 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 TRMT11Q7Z4G4 463 aaKnown RBP6.47□□□□□ -1.37
VRK3-220ENST00000600259 RABEPKQ7Z6M1 372 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 FAM35AQ86V20 835 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 C12orf56Q8IXR9 622 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 CCDC65Q8IXS2 484 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 RBBP8NLQ8NC74 664 aaPredicted RBP6.47□□□□□ -1.37
VRK3-220ENST00000600259 BAHD1Q8TBE0 780 aaPredicted RBP6.47□□□□□ -1.37
VRK3-220ENST00000600259 PARD3BQ8TEW8 1205 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 CCDC127Q96BQ5 260 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 HSPA12BQ96MM6 686 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 BBC3Q96PG8 261 aaPredicted RBP6.47□□□□□ -1.37
VRK3-220ENST00000600259 MKRN2Q9H000 416 aaKnown RBP6.47□□□□□ -1.37
VRK3-220ENST00000600259 FAM124BQ9H5Z6 455 aaPredicted RBP6.47□□□□□ -1.37
VRK3-220ENST00000600259 SMYD3Q9H7B4 428 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 NMUR1Q9HB89 426 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 IL21RQ9HBE5 538 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 CYLDQ9NQC7 956 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 ITM2CQ9NQX7 267 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 DMAC2Q9NW81 257 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 TOR4AQ9NXH8 423 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 CACNA2D2Q9NY47 1150 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 WSB2Q9NYS7 404 aaPredicted RBP6.47□□□□□ -1.37
VRK3-220ENST00000600259 KIAA1522Q9P206 1035 aaPredicted RBP6.47□□□□□ -1.37
VRK3-220ENST00000600259 USP36Q9P275 1121 aaKnown RBP6.47□□□□□ -1.37
VRK3-220ENST00000600259 NXF1Q9UBU9 619 aaKnown RBP6.47□□□□□ -1.37
VRK3-220ENST00000600259 CYP8B1Q9UNU6 501 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 SH3BP1Q9Y3L3 701 aa6.47□□□□□ -1.37
VRK3-220ENST00000600259 R3HCC1Q9Y3T6 440 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms