RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 PP2D1A8MPX8 630 aa18.75■□□□□ 0.59
SSBP4-207ENST00000600244 H0Y8X5 98 aa18.75■□□□□ 0.59
SSBP4-207ENST00000600244 ABL1P00519 1130 aa18.75■□□□□ 0.59
SSBP4-207ENST00000600244 BDNFP23560 247 aa18.75■□□□□ 0.59
SSBP4-207ENST00000600244 PCSK1P29120 753 aa18.75■□□□□ 0.59
SSBP4-207ENST00000600244 POU5F1Q01860 360 aaKnown RBP18.75■□□□□ 0.59
SSBP4-207ENST00000600244 TAF10Q12962 218 aa18.75■□□□□ 0.59
SSBP4-207ENST00000600244 TBC1D25Q3MII6 688 aa18.75■□□□□ 0.59
SSBP4-207ENST00000600244 SCARA3Q6AZY7 606 aa18.75■□□□□ 0.59
SSBP4-207ENST00000600244 FBXL19Q6PCT2 694 aa18.75■□□□□ 0.59
SSBP4-207ENST00000600244 C4orf50Q6ZRC1 276 aa18.75■□□□□ 0.59
SSBP4-207ENST00000600244 SYT2Q8N9I0 419 aaPredicted RBP18.75■□□□□ 0.59
SSBP4-207ENST00000600244 ARID3AQ99856 593 aa18.75■□□□□ 0.59
SSBP4-207ENST00000600244 MMTAG2Q9BU76 263 aaKnown RBP18.75■□□□□ 0.59
SSBP4-207ENST00000600244 NUP58Q9BVL2 599 aa18.75■□□□□ 0.59
SSBP4-207ENST00000600244 PCED1AQ9H1Q7 454 aa18.75■□□□□ 0.59
SSBP4-207ENST00000600244 DNAJC17Q9NVM6 304 aaKnown RBP18.75■□□□□ 0.59
SSBP4-207ENST00000600244 GDAP2Q9NXN4 497 aa18.75■□□□□ 0.59
SSBP4-207ENST00000600244 LARSQ9P2J5 1176 aaKnown RBP18.75■□□□□ 0.59
SSBP4-207ENST00000600244 IL17BQ9UHF5 180 aa18.75■□□□□ 0.59
SSBP4-207ENST00000600244 UBR5O95071 2799 aaPredicted RBP18.75■□□□□ 0.59
SSBP4-207ENST00000600244 ENC1O14682 589 aa18.74■□□□□ 0.59
SSBP4-207ENST00000600244 CACNG3O60359 315 aa18.74■□□□□ 0.59
SSBP4-207ENST00000600244 RFPL3O75679 317 aa18.74■□□□□ 0.59
SSBP4-207ENST00000600244 LHX1P48742 406 aa18.74■□□□□ 0.59
SSBP4-207ENST00000600244 FOSBP53539 338 aa18.74■□□□□ 0.59
SSBP4-207ENST00000600244 HES3Q5TGS1 186 aa18.74■□□□□ 0.59
SSBP4-207ENST00000600244 NT5DC4Q86YG4 428 aa18.74■□□□□ 0.59
SSBP4-207ENST00000600244 SCFD1Q8WVM8 642 aa18.74■□□□□ 0.59
SSBP4-207ENST00000600244 WBP2Q969T9 261 aa18.74■□□□□ 0.59
SSBP4-207ENST00000600244 MED8Q96G25 268 aa18.74■□□□□ 0.59
SSBP4-207ENST00000600244 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.74■□□□□ 0.59
SSBP4-207ENST00000600244 STON1Q9Y6Q2 735 aa18.74■□□□□ 0.59
SSBP4-207ENST00000600244 ANKRD63C9JTQ0 380 aa18.73■□□□□ 0.59
SSBP4-207ENST00000600244 TRAK2O60296 914 aa18.73■□□□□ 0.59
SSBP4-207ENST00000600244 SCP2P22307 547 aa18.73■□□□□ 0.59
SSBP4-207ENST00000600244 POLR2BP30876 1174 aaKnown RBP18.73■□□□□ 0.59
SSBP4-207ENST00000600244 GRIA4P48058 902 aa18.73■□□□□ 0.59
SSBP4-207ENST00000600244 INAVAQ3KP66 663 aa18.73■□□□□ 0.59
SSBP4-207ENST00000600244 KCNT1Q5JUK3 1230 aa18.73■□□□□ 0.59
SSBP4-207ENST00000600244 TTC38Q5R3I4 469 aa18.73■□□□□ 0.59
SSBP4-207ENST00000600244 KRT79Q5XKE5 535 aa18.73■□□□□ 0.59
SSBP4-207ENST00000600244 CRELD2Q6UXH1 353 aaPredicted RBP18.73■□□□□ 0.59
SSBP4-207ENST00000600244 CACTIN-AS1Q8N1I8 211 aa18.73■□□□□ 0.59
SSBP4-207ENST00000600244 CXorf38Q8TB03 319 aa18.73■□□□□ 0.59
SSBP4-207ENST00000600244 MYLPFQ96A32 169 aa18.73■□□□□ 0.59
SSBP4-207ENST00000600244 CPNE5Q9HCH3 593 aa18.73■□□□□ 0.59
SSBP4-207ENST00000600244 TM9SF3Q9HD45 589 aa18.73■□□□□ 0.59
SSBP4-207ENST00000600244 CRTAC1Q9NQ79 661 aa18.73■□□□□ 0.59
SSBP4-207ENST00000600244 AGAP1Q9UPQ3 857 aa18.73■□□□□ 0.59
SSBP4-207ENST00000600244 DOPEY2Q9Y3R5 2298 aa18.73■□□□□ 0.59
SSBP4-207ENST00000600244 NPHP3-ACAD11A0A0J9YXS1 232 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 CBX4O00257 560 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 COCHO43405 550 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 CISD3P0C7P0 127 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 CTSKP43235 329 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 ACADVLP49748 655 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 ZNF132P52740 706 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 SLC12A3P55017 1021 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 TMPRSS3P57727 454 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 DNAJC3Q13217 504 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 ENPP2Q13822 863 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 TRIM29Q14134 588 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 TEAD4Q15561 434 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 SOWAHAQ2M3V2 549 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 ARSHQ5FYA8 562 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 ARHGAP40Q5TG30 622 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 TMPRSS6Q8IU80 811 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 ADGRF2Q8IZF7 708 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 TOP6BLQ8N6T0 577 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 SNRNP27Q8WVK2 155 aaKnown RBP18.72■□□□□ 0.59
SSBP4-207ENST00000600244 TSC1Q92574 1164 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 C8orf48Q96LL4 319 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 LGMNQ99538 433 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 TRIM9Q9C026 710 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 KCND2Q9NZV8 630 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 SH3BP1Q9Y3L3 701 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 STYXL1Q9Y6J8 313 aa18.72■□□□□ 0.59
SSBP4-207ENST00000600244 LDOC1O95751 146 aaPredicted RBP18.71■□□□□ 0.59
SSBP4-207ENST00000600244 LMO2P25791 158 aa18.71■□□□□ 0.59
SSBP4-207ENST00000600244 ANXA13P27216 316 aa18.71■□□□□ 0.59
SSBP4-207ENST00000600244 GJB2P29033 226 aa18.71■□□□□ 0.59
SSBP4-207ENST00000600244 UCNP55089 124 aa18.71■□□□□ 0.59
SSBP4-207ENST00000600244 IL9RQ01113 521 aa18.71■□□□□ 0.59
SSBP4-207ENST00000600244 TDRD10Q5VZ19 366 aaKnown RBP18.71■□□□□ 0.59
SSBP4-207ENST00000600244 ADALQ6DHV7 355 aa18.71■□□□□ 0.59
SSBP4-207ENST00000600244 LIMS2Q7Z4I7 341 aa18.71■□□□□ 0.59
SSBP4-207ENST00000600244 LRRC52Q8N7C0 313 aa18.71■□□□□ 0.59
SSBP4-207ENST00000600244 C1orf127Q8N9H9 656 aa18.71■□□□□ 0.59
SSBP4-207ENST00000600244 ZNF248Q8NDW4 579 aa18.71■□□□□ 0.59
SSBP4-207ENST00000600244 SIPA1Q96FS4 1042 aa18.71■□□□□ 0.59
SSBP4-207ENST00000600244 XPO6Q96QU8 1125 aaKnown RBP18.71■□□□□ 0.59
SSBP4-207ENST00000600244 SYT15Q9BQS2 421 aa18.71■□□□□ 0.59
SSBP4-207ENST00000600244 RAB34Q9BZG1 259 aa18.71■□□□□ 0.59
SSBP4-207ENST00000600244 MARK1Q9P0L2 795 aa18.71■□□□□ 0.59
SSBP4-207ENST00000600244 SNX9Q9Y5X1 595 aa18.71■□□□□ 0.59
SSBP4-207ENST00000600244 A0A1B0GTQ1 180 aa18.7■□□□□ 0.58
SSBP4-207ENST00000600244 TISP43B9A030 160 aa18.7■□□□□ 0.58
SSBP4-207ENST00000600244 F8VP50 259 aa18.7■□□□□ 0.58
SSBP4-207ENST00000600244 DFNA5O60443 496 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms