RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 GPRIN1Q7Z2K8 1008 aa14.86□□□□□ -0.03
LIG1-218ENST00000599322 ZNF687Q8N1G0 1237 aa14.86□□□□□ -0.03
LIG1-218ENST00000599322 ZNF276Q8N554 614 aa14.86□□□□□ -0.03
LIG1-218ENST00000599322 ANKRD20A12PQ8NF67 263 aa14.86□□□□□ -0.03
LIG1-218ENST00000599322 UBA3Q8TBC4 463 aa14.86□□□□□ -0.03
LIG1-218ENST00000599322 ACDQ96AP0 544 aa14.86□□□□□ -0.03
LIG1-218ENST00000599322 HINFPQ9BQA5 517 aa14.86□□□□□ -0.03
LIG1-218ENST00000599322 PRMT8Q9NR22 394 aaPredicted RBP14.86□□□□□ -0.03
LIG1-218ENST00000599322 OLA1Q9NTK5 396 aaKnown RBP14.86□□□□□ -0.03
LIG1-218ENST00000599322 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.86□□□□□ -0.03
LIG1-218ENST00000599322 RASAL2Q9UJF2 1139 aa14.86□□□□□ -0.03
LIG1-218ENST00000599322 USP3Q9Y6I4 520 aa14.86□□□□□ -0.03
LIG1-218ENST00000599322 OBSL1O75147 1896 aa14.86□□□□□ -0.03
LIG1-218ENST00000599322 GTPBP10A4D1E9 387 aaKnown RBP14.85□□□□□ -0.03
LIG1-218ENST00000599322 M0QYV0 167 aa14.85□□□□□ -0.03
LIG1-218ENST00000599322 O00370 1275 aa14.85□□□□□ -0.03
LIG1-218ENST00000599322 APODP05090 189 aa14.85□□□□□ -0.03
LIG1-218ENST00000599322 USP8P40818 1118 aa14.85□□□□□ -0.03
LIG1-218ENST00000599322 EIF2DP41214 584 aaKnown RBP14.85□□□□□ -0.03
LIG1-218ENST00000599322 ID4P47928 161 aa14.85□□□□□ -0.03
LIG1-218ENST00000599322 FOXK2Q01167 660 aa14.85□□□□□ -0.03
LIG1-218ENST00000599322 ANO4Q32M45 955 aa14.85□□□□□ -0.03
LIG1-218ENST00000599322 DPCR1Q3MIW9 517 aa14.85□□□□□ -0.03
LIG1-218ENST00000599322 SMYD5Q6GMV2 418 aa14.85□□□□□ -0.03
LIG1-218ENST00000599322 FSTL4Q6MZW2 842 aa14.85□□□□□ -0.03
LIG1-218ENST00000599322 MIB1Q86YT6 1006 aa14.85□□□□□ -0.03
LIG1-218ENST00000599322 LMO3Q8TAP4 145 aa14.85□□□□□ -0.03
LIG1-218ENST00000599322 RIN3Q8TB24 985 aa14.85□□□□□ -0.03
LIG1-218ENST00000599322 XPO6Q96QU8 1125 aaKnown RBP14.85□□□□□ -0.03
LIG1-218ENST00000599322 PNKPQ96T60 521 aa14.85□□□□□ -0.03
LIG1-218ENST00000599322 CRACR2AQ9BSW2 395 aa14.85□□□□□ -0.03
LIG1-218ENST00000599322 CNGB3Q9NQW8 809 aa14.85□□□□□ -0.03
LIG1-218ENST00000599322 WDR35Q9P2L0 1181 aa14.85□□□□□ -0.03
LIG1-218ENST00000599322 KIF26AQ9ULI4 1882 aaPredicted RBP14.84□□□□□ -0.03
LIG1-218ENST00000599322 OTOL1A6NHN0 477 aaPredicted RBP14.84□□□□□ -0.03
LIG1-218ENST00000599322 SART1O43290 800 aaKnown RBP14.84□□□□□ -0.03
LIG1-218ENST00000599322 RNF40O75150 1001 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 TBX18O95935 607 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 EGFP01133 1207 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 CYP17A1P05093 508 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 LCP1P13796 627 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 CNR2P34972 360 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 ZXDBP98169 803 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 SATB1Q01826 763 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 ADIGQ0VDE8 80 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 EFEMP1Q12805 493 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 ARHGAP44Q17R89 818 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 RAB41Q5JT25 222 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 LY6G5CQ5SRR4 150 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 TSSK4Q6SA08 328 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 HTR3DQ70Z44 454 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 TTC30AQ86WT1 665 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 ARHGEF19Q8IW93 802 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 UBR7Q8N806 425 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 KCTD13Q8WZ19 329 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 CHFRQ96EP1 664 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 HSFY1Q96LI6 401 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 KLF16Q9BXK1 252 aaPredicted RBP14.84□□□□□ -0.03
LIG1-218ENST00000599322 ULBP1Q9BZM6 244 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 NMUR1Q9HB89 426 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 SPHK2Q9NRA0 654 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 ABCC13Q9NSE7 274 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 ANO10Q9NW15 660 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 MARCH2Q9P0N8 246 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 DEC1Q9P2X7 70 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 APEX2Q9UBZ4 518 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 DNAH14Q0VDD8 3507 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 ANAPC1Q9H1A4 1944 aa14.84□□□□□ -0.03
LIG1-218ENST00000599322 SCAMP3O14828 347 aaKnown RBP14.83□□□□□ -0.04
LIG1-218ENST00000599322 FBXO21O94952 628 aa14.83□□□□□ -0.04
LIG1-218ENST00000599322 PAPSS2O95340 614 aaPredicted RBP14.83□□□□□ -0.04
LIG1-218ENST00000599322 CYBBP04839 570 aa14.83□□□□□ -0.04
LIG1-218ENST00000599322 BRD2P25440 801 aaKnown RBP14.83□□□□□ -0.04
LIG1-218ENST00000599322 EEF1GP26641 437 aaKnown RBP14.83□□□□□ -0.04
LIG1-218ENST00000599322 CHKAP35790 457 aa14.83□□□□□ -0.04
LIG1-218ENST00000599322 ACADSBP45954 432 aa14.83□□□□□ -0.04
LIG1-218ENST00000599322 SNX16P57768 344 aa14.83□□□□□ -0.04
LIG1-218ENST00000599322 VWA3BQ502W6 1294 aa14.83□□□□□ -0.04
LIG1-218ENST00000599322 PM20D1Q6GTS8 502 aa14.83□□□□□ -0.04
LIG1-218ENST00000599322 TRIM65Q6PJ69 517 aa14.83□□□□□ -0.04
LIG1-218ENST00000599322 RHBDF2Q6PJF5 856 aa14.83□□□□□ -0.04
LIG1-218ENST00000599322 Q6ZS52 159 aa14.83□□□□□ -0.04
LIG1-218ENST00000599322 ERMP1Q7Z2K6 904 aa14.83□□□□□ -0.04
LIG1-218ENST00000599322 LONP2Q86WA8 852 aa14.83□□□□□ -0.04
LIG1-218ENST00000599322 BBS7Q8IWZ6 715 aa14.83□□□□□ -0.04
LIG1-218ENST00000599322 KAT5Q92993 513 aa14.83□□□□□ -0.04
LIG1-218ENST00000599322 TUBGCP2Q9BSJ2 902 aa14.83□□□□□ -0.04
LIG1-218ENST00000599322 TRIM62Q9BVG3 475 aa14.83□□□□□ -0.04
LIG1-218ENST00000599322 NDST4Q9H3R1 872 aa14.83□□□□□ -0.04
LIG1-218ENST00000599322 ARHGEF4Q9NR80 690 aa14.83□□□□□ -0.04
LIG1-218ENST00000599322 ST7Q9NRC1 585 aa14.83□□□□□ -0.04
LIG1-218ENST00000599322 NUDT5Q9UKK9 219 aa14.83□□□□□ -0.04
LIG1-218ENST00000599322 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.83□□□□□ -0.04
LIG1-218ENST00000599322 CACNA1AO00555 2505 aa14.83□□□□□ -0.04
LIG1-218ENST00000599322 SLC12A8A0AV02 714 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 TBC1D3BA6NDS4 549 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 CHURC1-FNTBB4DL54 471 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 KCNJ18B7U540 433 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 ZBTB24O43167 697 aaPredicted RBP14.82□□□□□ -0.04
LIG1-218ENST00000599322 THAP12O43422 761 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms