RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 TBX2Q13207 712 aaPredicted RBP19.09■□□□□ 0.65
LIG1-216ENST00000598938 HTR4Q13639 388 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 TRIM72Q6ZMU5 477 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 MTSS1LQ765P7 747 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 CMTM8Q8IZV2 173 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 OLIG1Q8TAK6 271 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 IRGQQ8WZA9 623 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 SMARCD2Q92925 531 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 PPP1R13BQ96KQ4 1090 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 NOX5Q96PH1 765 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 CPXM1Q96SM3 734 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 TRPC7Q9HCX4 862 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 ST7Q9NRC1 585 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 OSER1Q9NX31 292 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 WNT16Q9UBV4 365 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 FBXL21Q9UKT6 434 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 ANAPC1Q9H1A4 1944 aa19.09■□□□□ 0.65
LIG1-216ENST00000598938 EP300Q09472 2414 aaPredicted RBP19.09■□□□□ 0.65
LIG1-216ENST00000598938 TRAV19A0A0A6YYK7 116 aa19.08■□□□□ 0.64
LIG1-216ENST00000598938 E5RJQ4 531 aa19.08■□□□□ 0.64
LIG1-216ENST00000598938 PIK3R2O00459 728 aa19.08■□□□□ 0.64
LIG1-216ENST00000598938 OLFM2O95897 454 aa19.08■□□□□ 0.64
LIG1-216ENST00000598938 ABL1P00519 1130 aa19.08■□□□□ 0.64
LIG1-216ENST00000598938 ARID5BQ14865 1188 aa19.08■□□□□ 0.64
LIG1-216ENST00000598938 PTPN20Q4JDL3 420 aa19.08■□□□□ 0.64
LIG1-216ENST00000598938 HECTD3Q5T447 861 aa19.08■□□□□ 0.64
LIG1-216ENST00000598938 PARM1Q6UWI2 310 aa19.08■□□□□ 0.64
LIG1-216ENST00000598938 TMC6Q7Z403 805 aa19.08■□□□□ 0.64
LIG1-216ENST00000598938 ARHGAP18Q8N392 663 aa19.08■□□□□ 0.64
LIG1-216ENST00000598938 NDRG1Q92597 394 aaKnown RBP19.08■□□□□ 0.64
LIG1-216ENST00000598938 FGF14Q92915 247 aa19.08■□□□□ 0.64
LIG1-216ENST00000598938 NXPE3Q969Y0 559 aa19.08■□□□□ 0.64
LIG1-216ENST00000598938 SLC22A12Q96S37 553 aa19.08■□□□□ 0.64
LIG1-216ENST00000598938 PCDHB18PQ96TA0 734 aa19.08■□□□□ 0.64
LIG1-216ENST00000598938 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.08■□□□□ 0.64
LIG1-216ENST00000598938 CLIC5Q9NZA1 410 aa19.08■□□□□ 0.64
LIG1-216ENST00000598938 TJP2Q9UDY2 1190 aa19.08■□□□□ 0.64
LIG1-216ENST00000598938 NUP210Q8TEM1 1887 aaPredicted RBP19.07■□□□□ 0.64
LIG1-216ENST00000598938 YJEFN3A6XGL0 299 aa19.07■□□□□ 0.64
LIG1-216ENST00000598938 E7ENQ6 273 aa19.07■□□□□ 0.64
LIG1-216ENST00000598938 PAPSS1O43252 624 aaPredicted RBP19.07■□□□□ 0.64
LIG1-216ENST00000598938 PI15O43692 258 aa19.07■□□□□ 0.64
LIG1-216ENST00000598938 PRAMEF12O95522 483 aa19.07■□□□□ 0.64
LIG1-216ENST00000598938 HNRNPH3P31942 346 aaKnown RBP19.07■□□□□ 0.64
LIG1-216ENST00000598938 AVPR1AP37288 418 aa19.07■□□□□ 0.64
LIG1-216ENST00000598938 YWHAGP61981 247 aaKnown RBP eCLIP19.07■□□□□ 0.64
LIG1-216ENST00000598938 KLHL30Q0D2K2 578 aa19.07■□□□□ 0.64
LIG1-216ENST00000598938 HGSNATQ68CP4 663 aa19.07■□□□□ 0.64
LIG1-216ENST00000598938 TANGO2Q6ICL3 276 aa19.07■□□□□ 0.64
LIG1-216ENST00000598938 ARID3BQ8IVW6 561 aaPredicted RBP19.07■□□□□ 0.64
LIG1-216ENST00000598938 SIX5Q8N196 739 aa19.07■□□□□ 0.64
LIG1-216ENST00000598938 ZNF276Q8N554 614 aa19.07■□□□□ 0.64
LIG1-216ENST00000598938 ARL14EPQ8N8R7 260 aaPredicted RBP19.07■□□□□ 0.64
LIG1-216ENST00000598938 CLEC4CQ8WTT0 213 aa19.07■□□□□ 0.64
LIG1-216ENST00000598938 ELSPBP1Q96BH3 223 aa19.07■□□□□ 0.64
LIG1-216ENST00000598938 CYP2S1Q96SQ9 504 aa19.07■□□□□ 0.64
LIG1-216ENST00000598938 DNAJC7Q99615 494 aa19.07■□□□□ 0.64
LIG1-216ENST00000598938 MIS12Q9H081 205 aa19.07■□□□□ 0.64
LIG1-216ENST00000598938 HAUS4Q9H6D7 363 aa19.07■□□□□ 0.64
LIG1-216ENST00000598938 CCSER2Q9H7U1 834 aa19.07■□□□□ 0.64
LIG1-216ENST00000598938 NAGPAQ9UK23 515 aa19.07■□□□□ 0.64
LIG1-216ENST00000598938 NUMBLQ9Y6R0 609 aa19.07■□□□□ 0.64
LIG1-216ENST00000598938 DMXL1Q9Y485 3027 aa19.06■□□□□ 0.64
LIG1-216ENST00000598938 COCHO43405 550 aa19.06■□□□□ 0.64
LIG1-216ENST00000598938 TLR5O60602 858 aa19.06■□□□□ 0.64
LIG1-216ENST00000598938 MFAP3LO75121 409 aa19.06■□□□□ 0.64
LIG1-216ENST00000598938 ECI2O75521 394 aa19.06■□□□□ 0.64
LIG1-216ENST00000598938 ERBB2P04626 1255 aa19.06■□□□□ 0.64
LIG1-216ENST00000598938 TPM1P09493 284 aa19.06■□□□□ 0.64
LIG1-216ENST00000598938 UNGP13051 313 aaPredicted RBP19.06■□□□□ 0.64
LIG1-216ENST00000598938 RARGP13631 454 aa19.06■□□□□ 0.64
LIG1-216ENST00000598938 HDCP19113 662 aa19.06■□□□□ 0.64
LIG1-216ENST00000598938 GABRB2P47870 512 aa19.06■□□□□ 0.64
LIG1-216ENST00000598938 SLC7A9P82251 487 aa19.06■□□□□ 0.64
LIG1-216ENST00000598938 ZNF268Q14587 947 aaPredicted RBP19.06■□□□□ 0.64
LIG1-216ENST00000598938 CLEC16AQ2KHT3 1053 aa19.06■□□□□ 0.64
LIG1-216ENST00000598938 NAA35Q5VZE5 725 aa19.06■□□□□ 0.64
LIG1-216ENST00000598938 ZNF571Q7Z3V5 609 aaPredicted RBP19.06■□□□□ 0.64
LIG1-216ENST00000598938 SCUBE3Q8IX30 993 aa19.06■□□□□ 0.64
LIG1-216ENST00000598938 ST13P5Q8NFI4 369 aaPredicted RBP19.06■□□□□ 0.64
LIG1-216ENST00000598938 CPA5Q8WXQ8 436 aa19.06■□□□□ 0.64
LIG1-216ENST00000598938 RSPRY1Q96DX4 576 aa19.06■□□□□ 0.64
LIG1-216ENST00000598938 RNF38Q9H0F5 515 aa19.06■□□□□ 0.64
LIG1-216ENST00000598938 BZW2Q9Y6E2 419 aaKnown RBP19.06■□□□□ 0.64
LIG1-216ENST00000598938 SART1O43290 800 aaKnown RBP19.05■□□□□ 0.64
LIG1-216ENST00000598938 LMNAP02545 664 aaKnown RBP19.05■□□□□ 0.64
LIG1-216ENST00000598938 SERPING1P05155 500 aa19.05■□□□□ 0.64
LIG1-216ENST00000598938 CKMP06732 381 aa19.05■□□□□ 0.64
LIG1-216ENST00000598938 SKILP12757 684 aa19.05■□□□□ 0.64
LIG1-216ENST00000598938 VIPR2P41587 438 aa19.05■□□□□ 0.64
LIG1-216ENST00000598938 SNX16P57768 344 aa19.05■□□□□ 0.64
LIG1-216ENST00000598938 CENPCQ03188 943 aa19.05■□□□□ 0.64
LIG1-216ENST00000598938 ERICH1Q86X53 443 aa19.05■□□□□ 0.64
LIG1-216ENST00000598938 OR8K1Q8NGG5 319 aa19.05■□□□□ 0.64
LIG1-216ENST00000598938 IPO4Q8TEX9 1081 aaKnown RBP19.05■□□□□ 0.64
LIG1-216ENST00000598938 RSAD2Q8WXG1 361 aa19.05■□□□□ 0.64
LIG1-216ENST00000598938 USP13Q92995 863 aaPredicted RBP19.05■□□□□ 0.64
LIG1-216ENST00000598938 E2F7Q96AV8 911 aa19.05■□□□□ 0.64
LIG1-216ENST00000598938 CDK5RAP1Q96SZ6 601 aaKnown RBP19.05■□□□□ 0.64
LIG1-216ENST00000598938 KXD1Q9BQD3 176 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms