RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 HS2ST1Q7LGA3 356 aa14.79□□□□□ -0.04
SHKBP1-218ENST00000598907 GALNT15Q8N3T1 639 aa14.79□□□□□ -0.04
SHKBP1-218ENST00000598907 PDCD7Q8N8D1 485 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-218ENST00000598907 ARL14EPQ8N8R7 260 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-218ENST00000598907 SPPL2BQ8TCT7 592 aa14.79□□□□□ -0.04
SHKBP1-218ENST00000598907 TSG101Q99816 390 aa14.79□□□□□ -0.04
SHKBP1-218ENST00000598907 HSD3B7Q9H2F3 369 aa14.79□□□□□ -0.04
SHKBP1-218ENST00000598907 KIAA1522Q9P206 1035 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-218ENST00000598907 IGHV1OR15-9A0A0B4J2B8 117 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 SMTNL1A8MU46 457 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 CLIC2O15247 247 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 FAM189A1O60320 539 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 KAT7O95251 611 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 NR3C1P04150 777 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 APODP05090 189 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 CYP17A1P05093 508 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 CHRM1P11229 460 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 EIF2S3P41091 472 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 WASP42768 502 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 MCCD1P59942 119 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 MCL1Q07820 350 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 LRRTM3Q86VH5 581 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 C12orf40Q86WS4 652 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 IRF2BP1Q8IU81 584 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 AOPEPQ8N6M6 819 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 LSM14AQ8ND56 463 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 SPATA18Q8TC71 538 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 BICD1Q96G01 975 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 CEP63Q96MT8 703 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 CBWD1Q9BRT8 395 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 PI4K2AQ9BTU6 479 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 RBSNQ9H1K0 784 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 CD93Q9NPY3 652 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 SUSD2Q9UGT4 822 aa14.78□□□□□ -0.04
SHKBP1-218ENST00000598907 C2orf78A6NCI8 922 aa14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 PLK4O00444 970 aa14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 KIAA0391O15091 583 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 CLDN3O15551 220 aa14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 CSH1P0DML2 217 aa14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 CSH2P0DML3 217 aa14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 HLA-EP13747 358 aa14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 GNSP15586 552 aa14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 NR2F2P24468 414 aa14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 RPL13P26373 211 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 LILRA4P59901 499 aa14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 SEMG2Q02383 582 aa14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 PPP2R3AQ06190 1150 aa14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 ADAM9Q13443 819 aa14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 CDKAL1Q5VV42 579 aa14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 FILIP1Q7Z7B0 1213 aa14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 LUZP1Q86V48 1076 aa14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 CSGALNACT2Q8N6G5 542 aa14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 NOC3LQ8WTT2 800 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 PNKPQ96T60 521 aa14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 SRRTQ9BXP5 876 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 FAM124BQ9H5Z6 455 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 ARHGEF4Q9NR80 690 aa14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 HSPBP1Q9NZL4 362 aa14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 DNMT3LQ9UJW3 386 aa14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 NFE2L3Q9Y4A8 694 aa14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 GOLGA4Q13439 2230 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-218ENST00000598907 TLX3O43711 291 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 ZNF18P17022 549 aa14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 TNFSF9P41273 254 aa14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 KIR2DL1P43626 348 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 DDR2Q16832 855 aa14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 HSF5Q4G112 596 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 TAF1BQ53T94 588 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 PCSK4Q6UW60 755 aa14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 CRELD2Q6UXH1 353 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 GPR155Q7Z3F1 870 aa14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 METTL23Q86XA0 190 aa14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 ZCCHC9Q8N567 271 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 FAM181AQ8N9Y4 354 aa14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 XXYLT1Q8NBI6 393 aa14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 ZSWIM2Q8NEG5 633 aa14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 BAHD1Q8TBE0 780 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 RHBDD1Q8TEB9 315 aa14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 C2orf15Q8WU43 125 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 POMGNT1Q8WZA1 660 aa14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 PCIF1Q9H4Z3 704 aa14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 THAP9Q9H5L6 903 aa14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 GAREM1Q9H706 876 aa14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 TM7SF3Q9NS93 570 aa14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 SAMSN1Q9NSI8 373 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 FANCLQ9NW38 375 aa14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 FNDC3AQ9Y2H6 1198 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 PCDHB5Q9Y5E4 795 aa14.76□□□□□ -0.05
SHKBP1-218ENST00000598907 SPTA1P02549 2419 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 PTPRQQ9UMZ3 2332 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 TTC26A0AVF1 554 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 MEI4A8MW99 385 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 CETN3O15182 167 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 MAPK13O15264 365 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 OGTO15294 1046 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 XPOTO43592 962 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 NDUFS2O75306 463 aa14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 FGFR1OPO95684 399 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 LDHAP00338 332 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-218ENST00000598907 HOXB2P14652 356 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms