RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 SMOQ99835 787 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 FBXO44Q9H4M3 255 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 TLR8Q9NR97 1041 aaKnown RBP11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 DNAJC17Q9NVM6 304 aaKnown RBP11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 IL37Q9NZH6 218 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 SERTAD1Q9UHV2 236 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 LSM7Q9UK45 103 aaKnown RBP11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 PCDHA7Q9UN72 937 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 NEDD8-MDP1E9PL57 170 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 VNN1O95497 513 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 CHRM1P11229 460 aaPredicted RBP11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 GABRG2P18507 467 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 ADORA2BP29275 332 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 NTSR1P30989 418 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 ATP5C1P36542 298 aaKnown RBP11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 DLG4P78352 724 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 ZNF33AQ06730 810 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 GOLGA8FQ08AF8 430 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 GOLGA8DPQ0D2H9 430 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 DUOXA1Q1HG43 343 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 EGFLAMQ63HQ2 1017 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 SLC23A3Q6PIS1 610 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 HTR3DQ70Z44 454 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 CHPFQ8IZ52 775 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 HDDC3Q8N4P3 179 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 CEP76Q8TAP6 659 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 JAKMIP2Q96AA8 810 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 SCNM1Q9BWG6 230 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 GTPBP2Q9BX10 602 aaKnown RBP11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 BBS2Q9BXC9 721 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 KLF16Q9BXK1 252 aaPredicted RBP11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 ADAM33Q9BZ11 813 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 FAM49BQ9NUQ9 324 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 EXOC1Q9NV70 894 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 PILRBQ9UKJ0 227 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 ZMIZ1Q9ULJ6 1067 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 SLC6A14Q9UN76 642 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 USP24Q9UPU5 2620 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 PCDH15Q96QU1 1955 aa11.16□□□□□ -0.62
CHMP2A-202ENST00000596708 FAM92AA1XBS5 289 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 KLRC4O43908 158 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 TBX18O95935 607 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 F13A1P00488 732 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 RPN1P04843 607 aaKnown RBP11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 HSP90AA1P07900 732 aaKnown RBP11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 FAM200BP0CF97 657 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 TYRP14679 529 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 PIK3CAP42336 1068 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 PGFP49763 221 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 CLDN10P78369 228 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 GFPT1Q06210 699 aaPredicted RBP11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 STK4Q13043 487 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 KMT5BQ4FZB7 885 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 RESP18Q5W5W9 173 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 CEP135Q66GS9 1140 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 SPOPLQ6IQ16 392 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 KIAA1211LQ6NV74 962 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 UNC93AQ86WB7 457 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 MIB1Q86YT6 1006 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 RGL4Q8IZJ4 473 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 CRYBG2Q8N1P7 616 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 C12orf29Q8N999 325 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 IPO4Q8TEX9 1081 aaKnown RBP11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 TAF4BQ92750 862 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 DUSP9Q99956 384 aaKnown RBP11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 CSNK1G1Q9HCP0 422 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 FSCN3Q9NQT6 498 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 DMAC2Q9NW81 257 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 CALCOCO1Q9P1Z2 691 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 WDR35Q9P2L0 1181 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 HMGXB4Q9UGU5 601 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 NUDT5Q9UKK9 219 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 RALYQ9UKM9 306 aaKnown RBP11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 HCN2Q9UL51 889 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 CYP8B1Q9UNU6 501 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 FRMD4BQ9Y2L6 1034 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 STARD13Q9Y3M8 1113 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 NUMA1Q14980 2115 aa11.15□□□□□ -0.62
CHMP2A-202ENST00000596708 CKAP5Q14008 2032 aa11.14□□□□□ -0.63
CHMP2A-202ENST00000596708 LAMA1P25391 3075 aa11.14□□□□□ -0.63
CHMP2A-202ENST00000596708 IGHV1OR15-9A0A0B4J2B8 117 aa11.14□□□□□ -0.63
CHMP2A-202ENST00000596708 MDM4O15151 490 aa11.14□□□□□ -0.63
CHMP2A-202ENST00000596708 OPHN1O60890 802 aa11.14□□□□□ -0.63
CHMP2A-202ENST00000596708 NDUFS2O75306 463 aa11.14□□□□□ -0.63
CHMP2A-202ENST00000596708 ZNF217O75362 1048 aa11.14□□□□□ -0.63
CHMP2A-202ENST00000596708 KIF20AO95235 890 aa11.14□□□□□ -0.63
CHMP2A-202ENST00000596708 NR3C1P04150 777 aa11.14□□□□□ -0.63
CHMP2A-202ENST00000596708 ZSCAN22P10073 491 aaPredicted RBP11.14□□□□□ -0.63
CHMP2A-202ENST00000596708 RARGP13631 454 aa11.14□□□□□ -0.63
CHMP2A-202ENST00000596708 ACO1P21399 889 aaKnown RBP11.14□□□□□ -0.63
CHMP2A-202ENST00000596708 HOXD12P35452 270 aa11.14□□□□□ -0.63
CHMP2A-202ENST00000596708 PLA2G4AP47712 749 aa11.14□□□□□ -0.63
CHMP2A-202ENST00000596708 ZACNQ401N2 412 aa11.14□□□□□ -0.63
CHMP2A-202ENST00000596708 CLEC20AQ6ZU45 233 aa11.14□□□□□ -0.63
CHMP2A-202ENST00000596708 SV2AQ7L0J3 742 aa11.14□□□□□ -0.63
CHMP2A-202ENST00000596708 RABEPKQ7Z6M1 372 aa11.14□□□□□ -0.63
CHMP2A-202ENST00000596708 SLC9A9Q8IVB4 645 aa11.14□□□□□ -0.63
CHMP2A-202ENST00000596708 KIAA0895Q8NCT3 520 aa11.14□□□□□ -0.63
CHMP2A-202ENST00000596708 TMC2Q8TDI7 906 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms