RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 SMARCD1Q96GM5 515 aa10.56□□□□□ -0.72
LIG1-209ENST00000596104 HSPA12BQ96MM6 686 aa10.56□□□□□ -0.72
LIG1-209ENST00000596104 SMOQ99835 787 aa10.56□□□□□ -0.72
LIG1-209ENST00000596104 GABRG3Q99928 467 aa10.56□□□□□ -0.72
LIG1-209ENST00000596104 LRRC27Q9C0I9 530 aa10.56□□□□□ -0.72
LIG1-209ENST00000596104 SDCBP2Q9H190 292 aa10.56□□□□□ -0.72
LIG1-209ENST00000596104 CUEDC2Q9H467 287 aa10.56□□□□□ -0.72
LIG1-209ENST00000596104 CD93Q9NPY3 652 aa10.56□□□□□ -0.72
LIG1-209ENST00000596104 DNAAF2Q9NVR5 837 aaKnown RBP10.56□□□□□ -0.72
LIG1-209ENST00000596104 COMMD8Q9NX08 183 aa10.56□□□□□ -0.72
LIG1-209ENST00000596104 LHX6Q9UPM6 363 aa10.56□□□□□ -0.72
LIG1-209ENST00000596104 MTMR6Q9Y217 621 aa10.56□□□□□ -0.72
LIG1-209ENST00000596104 ATP8B3O60423 1300 aa10.56□□□□□ -0.72
LIG1-209ENST00000596104 UBE4BO95155 1302 aa10.56□□□□□ -0.72
LIG1-209ENST00000596104 A0A1W2PQD8 194 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 PRRT4C9JH25 899 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 TLR5O60602 858 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 ZNF217O75362 1048 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 AP1G2O75843 785 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 BEST1O76090 585 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 IRF1P10914 325 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 CASP4P49662 377 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 HNRNPDQ14103 355 aaKnown RBP10.55□□□□□ -0.72
LIG1-209ENST00000596104 BMT2Q1RMZ1 405 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 ZNF423Q2M1K9 1284 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 GRAMD4Q6IC98 578 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 TOGARAM2Q6ZUX3 1019 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 NUDT18Q6ZVK8 323 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 CHPFQ8IZ52 775 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 ELMO3Q96BJ8 720 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 ZNF419Q96HQ0 510 aaPredicted RBP10.55□□□□□ -0.72
LIG1-209ENST00000596104 TNIP3Q96KP6 325 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 CAMK1GQ96NX5 476 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 C7orf25Q9BPX7 421 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 MED10Q9BTT4 135 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 KLF16Q9BXK1 252 aaPredicted RBP10.55□□□□□ -0.72
LIG1-209ENST00000596104 UPF2Q9HAU5 1272 aaKnown RBP10.55□□□□□ -0.72
LIG1-209ENST00000596104 CSNK1G1Q9HCP0 422 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 KRT82Q9NSB4 513 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 DNAJC17Q9NVM6 304 aaKnown RBP10.55□□□□□ -0.72
LIG1-209ENST00000596104 MARK1Q9P0L2 795 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 CYP8B1Q9UNU6 501 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 TNRC6BQ9UPQ9 1833 aaKnown RBP10.55□□□□□ -0.72
LIG1-209ENST00000596104 PCNX2A6NKB5 2137 aa10.55□□□□□ -0.72
LIG1-209ENST00000596104 FASNP49327 2511 aaKnown RBP10.54□□□□□ -0.72
LIG1-209ENST00000596104 PCDH15Q96QU1 1955 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 NEDD8-MDP1E9PL57 170 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 SH3BP5O60239 455 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 PHACTR2O75167 634 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 VNN1O95497 513 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 TBX18O95935 607 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 C4BPAP04003 597 aaKnown RBP10.54□□□□□ -0.72
LIG1-209ENST00000596104 SYPP08247 313 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 CISD3P0C7P0 127 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 CCDC130P13994 396 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 TYRP14679 529 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 CLDN10P78369 228 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 AMPD3Q01432 767 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 SLC14A1Q13336 389 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 NCOA4Q13772 614 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 ZNF699Q32M78 642 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 ZNF667Q5HYK9 610 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 SCARA5Q6ZMJ2 495 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 UNC13DQ70J99 1090 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 ACOT1Q86TX2 421 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 PROSER1Q86XN7 944 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 PARD3BQ8TEW8 1205 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 DHX58Q96C10 678 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 ERLEC1Q96DZ1 483 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 P2RY11Q96G91 374 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 MRGPRX1Q96LB2 322 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 BBS2Q9BXC9 721 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 NACA2Q9H009 215 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 SLC6A17Q9H1V8 727 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 CYLDQ9NQC7 956 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 OSER1Q9NX31 292 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 CACNA2D2Q9NY47 1150 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 RAD54BQ9Y620 910 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 PLXND1Q9Y4D7 1925 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 DMXL2Q8TDJ6 3036 aa10.54□□□□□ -0.72
LIG1-209ENST00000596104 LRRIQ3A6PVS8 624 aaPredicted RBP10.53□□□□□ -0.72
LIG1-209ENST00000596104 HHLA1C9JL84 531 aa10.53□□□□□ -0.72
LIG1-209ENST00000596104 GFRA2O00451 464 aa10.53□□□□□ -0.72
LIG1-209ENST00000596104 SPTLC2O15270 562 aa10.53□□□□□ -0.72
LIG1-209ENST00000596104 EXOC3O60645 756 aa10.53□□□□□ -0.72
LIG1-209ENST00000596104 CASP1P29466 404 aa10.53□□□□□ -0.72
LIG1-209ENST00000596104 RDXP35241 583 aaKnown RBP10.53□□□□□ -0.72
LIG1-209ENST00000596104 BIRC3Q13489 604 aa10.53□□□□□ -0.72
LIG1-209ENST00000596104 ACAP1Q15027 740 aa10.53□□□□□ -0.72
LIG1-209ENST00000596104 STK38Q15208 465 aa10.53□□□□□ -0.72
LIG1-209ENST00000596104 SDE2Q6IQ49 451 aa10.53□□□□□ -0.72
LIG1-209ENST00000596104 SHC4Q6S5L8 630 aa10.53□□□□□ -0.72
LIG1-209ENST00000596104 Q6ZNB5 142 aa10.53□□□□□ -0.72
LIG1-209ENST00000596104 TPGS1Q6ZTW0 290 aa10.53□□□□□ -0.72
LIG1-209ENST00000596104 GPRIN1Q7Z2K8 1008 aa10.53□□□□□ -0.72
LIG1-209ENST00000596104 CRYBG2Q8N1P7 616 aa10.53□□□□□ -0.72
LIG1-209ENST00000596104 IQUBQ8NA54 791 aa10.53□□□□□ -0.72
LIG1-209ENST00000596104 SLC2A14Q8TDB8 520 aa10.53□□□□□ -0.72
LIG1-209ENST00000596104 ADAMTS14Q8WXS8 1223 aa10.53□□□□□ -0.72
LIG1-209ENST00000596104 XPO6Q96QU8 1125 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms