RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 AAASQ9NRG9 546 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 KIAA1257Q9ULG3 409 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 NEU2Q9Y3R4 380 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 RIPK2O43353 540 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 CREB3O43889 395 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 KRT7P08729 469 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 PDGFRBP09619 1106 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 ATP5DP30049 168 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 AXLP30530 894 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 PTDSS1P48651 473 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 TAF5Q15542 800 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 UBXN11Q5T124 520 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 PMF1Q6P1K2 205 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 POLNQ7Z5Q5 900 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 TTC30AQ86WT1 665 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 LRRC52Q8N7C0 313 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 CCDC89Q8N998 374 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 ARHGAP39Q9C0H5 1083 aa17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 UBQLN1Q9UMX0 589 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-205ENST00000594973 C3orf70A6NLC5 250 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-205ENST00000594973 A8MXQ7 604 aa17.77■□□□□ 0.44
SHKBP1-205ENST00000594973 ZSCAN5DPP0CG00 497 aa17.77■□□□□ 0.44
SHKBP1-205ENST00000594973 PYGBP11216 843 aa17.77■□□□□ 0.44
SHKBP1-205ENST00000594973 MIPP30301 263 aa17.77■□□□□ 0.44
SHKBP1-205ENST00000594973 CRYBB1P53674 252 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-205ENST00000594973 POLE2P56282 527 aa17.77■□□□□ 0.44
SHKBP1-205ENST00000594973 CDO1Q16878 200 aa17.77■□□□□ 0.44
SHKBP1-205ENST00000594973 RAB6CQ53S08 254 aa17.77■□□□□ 0.44
SHKBP1-205ENST00000594973 FBXO47Q5MNV8 452 aa17.77■□□□□ 0.44
SHKBP1-205ENST00000594973 RNF220Q5VTB9 566 aa17.77■□□□□ 0.44
SHKBP1-205ENST00000594973 TWF2Q6IBS0 349 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-205ENST00000594973 ARHGAP18Q8N392 663 aa17.77■□□□□ 0.44
SHKBP1-205ENST00000594973 RMDN2Q96LZ7 410 aa17.77■□□□□ 0.44
SHKBP1-205ENST00000594973 DDX23Q9BUQ8 820 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-205ENST00000594973 RAB6CQ9H0N0 254 aa17.77■□□□□ 0.44
SHKBP1-205ENST00000594973 Q9Y3F1 56 aa17.77■□□□□ 0.44
SHKBP1-205ENST00000594973 IPPQ9Y573 584 aa17.77■□□□□ 0.44
SHKBP1-205ENST00000594973 SPTLC1O15269 473 aa17.77■□□□□ 0.43
SHKBP1-205ENST00000594973 ACSL3O95573 720 aa17.77■□□□□ 0.43
SHKBP1-205ENST00000594973 PGK1P00558 417 aa17.77■□□□□ 0.43
SHKBP1-205ENST00000594973 ETS1P14921 441 aa17.77■□□□□ 0.43
SHKBP1-205ENST00000594973 SLCO1A2P46721 670 aa17.77■□□□□ 0.43
SHKBP1-205ENST00000594973 C15orf59Q2T9L4 293 aaPredicted RBP17.77■□□□□ 0.43
SHKBP1-205ENST00000594973 P3H1Q32P28 736 aa17.77■□□□□ 0.43
SHKBP1-205ENST00000594973 HHATQ5VTY9 493 aa17.77■□□□□ 0.43
SHKBP1-205ENST00000594973 CXCL17Q6UXB2 119 aa17.77■□□□□ 0.43
SHKBP1-205ENST00000594973 KCTD6Q8NC69 237 aa17.77■□□□□ 0.43
SHKBP1-205ENST00000594973 ARRDC4Q8NCT1 418 aa17.77■□□□□ 0.43
SHKBP1-205ENST00000594973 FAM13CQ8NE31 585 aa17.77■□□□□ 0.43
SHKBP1-205ENST00000594973 EPS8L3Q8TE67 593 aaKnown RBP17.77■□□□□ 0.43
SHKBP1-205ENST00000594973 ZNF333Q96JL9 665 aa17.77■□□□□ 0.43
SHKBP1-205ENST00000594973 TRAIPQ9BWF2 469 aa17.77■□□□□ 0.43
SHKBP1-205ENST00000594973 CDC42EP4Q9H3Q1 356 aaKnown RBP17.77■□□□□ 0.43
SHKBP1-205ENST00000594973 PDGFRAP16234 1089 aa17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 SOX4Q06945 474 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 MUM1Q2TAK8 710 aa17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 ZNF618Q5T7W0 954 aa17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 IZUMO3Q5VZ72 239 aa17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 TRNP1Q6NT89 227 aa17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 RHBDF2Q6PJF5 856 aa17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 SCUBE3Q8IX30 993 aa17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 RXFP2Q8WXD0 754 aa17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 TMEM121Q9BTD3 319 aa17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 DCLRE1BQ9H816 532 aa17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 STOML1Q9UBI4 398 aa17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 USP18Q9UMW8 372 aa17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 KPNA7A9QM74 516 aa17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 NVLO15381 856 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 KDELR1P24390 212 aa17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 LMO2P25791 158 aa17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 KLRC2P26717 231 aa17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 MTFR1Q15390 333 aa17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 ARMC3Q5W041 872 aa17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 SMG8Q8ND04 991 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 FAM124BQ9H5Z6 455 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 C10orf88Q9H8K7 445 aa17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 ASNSD1Q9NWL6 643 aa17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 HESX1Q9UBX0 185 aa17.76■□□□□ 0.43
SHKBP1-205ENST00000594973 A0A1B0GVG6 124 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 TMEM120BA0PK00 339 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 CST8O60676 142 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 PENKP01210 267 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 IFNB1P01574 187 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 SKIP12755 728 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 CCDC130P13994 396 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 GPD1P21695 349 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 RASSF2P50749 326 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 ZNF143P52747 638 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 MGAT5Q09328 741 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 SETDB1Q15047 1291 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 ECHDC2Q86YB7 292 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 ANKLE1Q8NAG6 615 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 ZFP42Q96MM3 310 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 SERPINB12Q96P63 405 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 CALN1Q9BXU9 219 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 B3GNT5Q9BYG0 378 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 MIS12Q9H081 205 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 ABT1Q9ULW3 272 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 PHF24Q9UPV7 400 aa17.75■□□□□ 0.43
SHKBP1-205ENST00000594973 SLC4A7Q9Y6M7 1214 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms