RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 STRADAQ7RTN6 431 aa15.85■□□□□ 0.13
VRK3-207ENST00000594092 ANKS1BQ7Z6G8 1248 aa15.85■□□□□ 0.13
VRK3-207ENST00000594092 MTERF4Q7Z6M4 381 aaKnown RBP15.85■□□□□ 0.13
VRK3-207ENST00000594092 ADAT2Q7Z6V5 191 aaKnown RBP15.85■□□□□ 0.13
VRK3-207ENST00000594092 CCDC50Q8IVM0 306 aa15.85■□□□□ 0.13
VRK3-207ENST00000594092 KLHL7Q8IXQ5 586 aa15.85■□□□□ 0.13
VRK3-207ENST00000594092 RAPGEF5Q92565 580 aa15.85■□□□□ 0.13
VRK3-207ENST00000594092 RNF25Q96BH1 459 aaPredicted RBP15.85■□□□□ 0.13
VRK3-207ENST00000594092 RBM41Q96IZ5 413 aaKnown RBP15.85■□□□□ 0.13
VRK3-207ENST00000594092 SLITRK1Q96PX8 696 aa15.85■□□□□ 0.13
VRK3-207ENST00000594092 NPY6RQ99463 290 aa15.85■□□□□ 0.13
VRK3-207ENST00000594092 ZBP1Q9H171 429 aa15.85■□□□□ 0.13
VRK3-207ENST00000594092 CALCOCO1Q9P1Z2 691 aa15.85■□□□□ 0.13
VRK3-207ENST00000594092 STK39Q9UEW8 545 aa15.85■□□□□ 0.13
VRK3-207ENST00000594092 STAP1Q9ULZ2 295 aa15.85■□□□□ 0.13
VRK3-207ENST00000594092 NR2E1Q9Y466 385 aa15.85■□□□□ 0.13
VRK3-207ENST00000594092 TCRBV7S2A1N4TA0A589 114 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 CCDC85CA6NKD9 419 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 CAPN9O14815 690 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 FSCN2O14926 492 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 ERLIN1O75477 346 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 ABLIM3O94929 683 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 DNAJB2P25686 324 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 ATXN1P54253 815 aaKnown RBP15.84■□□□□ 0.13
VRK3-207ENST00000594092 VSNL1P62760 191 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 SMC1AQ14683 1233 aaKnown RBP15.84■□□□□ 0.13
VRK3-207ENST00000594092 PPP2R5EQ16537 467 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 C9orf50Q5SZB4 431 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 BSPRYQ5W0U4 402 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 SCYL2Q6P3W7 929 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 TMCO3Q6UWJ1 677 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 MFSD7Q6UXD7 560 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 BNIPLQ7Z465 357 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 GPR65Q8IYL9 337 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 GPR152Q8TDT2 470 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 SPATA17Q96L03 361 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 HERPUD2Q9BSE4 406 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 MRPL17Q9NRX2 175 aaKnown RBP15.84■□□□□ 0.13
VRK3-207ENST00000594092 IL37Q9NZH6 218 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 AFF4Q9UHB7 1163 aaKnown RBP15.84■□□□□ 0.13
VRK3-207ENST00000594092 COL4A4P53420 1690 aaPredicted RBP15.84■□□□□ 0.13
VRK3-207ENST00000594092 LRRD1A4D1F6 860 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 C3orf70A6NLC5 250 aaPredicted RBP15.84■□□□□ 0.13
VRK3-207ENST00000594092 LILRB3O75022 631 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 ENDOD1O94919 500 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 RALAP11233 206 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 NCAM1P13591 858 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 USP46P62068 366 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 RPL10AP62906 217 aaKnown RBP15.84■□□□□ 0.13
VRK3-207ENST00000594092 TPGS2Q68CL5 300 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 ZDHHC14Q8IZN3 488 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 CMASQ8NFW8 434 aaPredicted RBP15.84■□□□□ 0.13
VRK3-207ENST00000594092 ZNF461Q8TAF7 563 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 EDEM1Q92611 657 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 OSBPL8Q9BZF1 889 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 FBXO44Q9H4M3 255 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 SLITRK6Q9H5Y7 841 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 STIM2Q9P246 746 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 MTUS1Q9ULD2 1270 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 SCML2Q9UQR0 700 aa15.84■□□□□ 0.13
VRK3-207ENST00000594092 CTSAP10619 480 aa15.83■□□□□ 0.12
VRK3-207ENST00000594092 BMPR1AP36894 532 aa15.83■□□□□ 0.12
VRK3-207ENST00000594092 MAGEA10P43363 369 aaPredicted RBP15.83■□□□□ 0.12
VRK3-207ENST00000594092 PGFP49763 221 aa15.83■□□□□ 0.12
VRK3-207ENST00000594092 COPS2P61201 443 aa15.83■□□□□ 0.12
VRK3-207ENST00000594092 YWHAGP61981 247 aaKnown RBP eCLIP15.83■□□□□ 0.12
VRK3-207ENST00000594092 RAB33AQ14088 237 aa15.83■□□□□ 0.12
VRK3-207ENST00000594092 SIX1Q15475 284 aaPredicted RBP15.83■□□□□ 0.12
VRK3-207ENST00000594092 BOLA3Q53S33 107 aa15.83■□□□□ 0.12
VRK3-207ENST00000594092 ODF2Q5BJF6 829 aa15.83■□□□□ 0.12
VRK3-207ENST00000594092 SPOCD1Q6ZMY3 1216 aa15.83■□□□□ 0.12
VRK3-207ENST00000594092 DENND5BQ6ZUT9 1274 aa15.83■□□□□ 0.12
VRK3-207ENST00000594092 BEND5Q7L4P6 421 aa15.83■□□□□ 0.12
VRK3-207ENST00000594092 SCD5Q86SK9 330 aa15.83■□□□□ 0.12
VRK3-207ENST00000594092 TEKT4Q8WW24 435 aa15.83■□□□□ 0.12
VRK3-207ENST00000594092 HSPH1Q92598 858 aa15.83■□□□□ 0.12
VRK3-207ENST00000594092 HEMGNQ9BXL5 484 aa15.83■□□□□ 0.12
VRK3-207ENST00000594092 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.83■□□□□ 0.12
VRK3-207ENST00000594092 RRN3Q9NYV6 651 aa15.83■□□□□ 0.12
VRK3-207ENST00000594092 FNIP2Q9P278 1114 aa15.83■□□□□ 0.12
VRK3-207ENST00000594092 FAM92AA1XBS5 289 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 LINC01553A4QN01 128 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 M0QYT0 321 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 RTN3O95197 1032 aaPredicted RBP15.82■□□□□ 0.12
VRK3-207ENST00000594092 SEC24AO95486 1093 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 ATF2P15336 505 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 ATF6P18850 670 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 KDELR1P24390 212 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 CTNNB1P35222 781 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 PTPN7P35236 360 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 CETN2P41208 172 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 CDKN2BP42772 138 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 TUFMP49411 452 aaKnown RBP15.82■□□□□ 0.12
VRK3-207ENST00000594092 CCDC26Q8TAB7 109 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 SLC7A14Q8TBB6 771 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 HNRNPLLQ8WVV9 542 aaKnown RBP15.82■□□□□ 0.12
VRK3-207ENST00000594092 MAIP1Q8WWC4 291 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 SNRNP25Q9BV90 132 aaKnown RBP15.82■□□□□ 0.12
VRK3-207ENST00000594092 TRIM62Q9BVG3 475 aa15.82■□□□□ 0.12
VRK3-207ENST00000594092 DDX47Q9H0S4 455 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms