RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 SPHK2Q9NRA0 654 aa24.54■■□□□ 1.52
MBD3-211ENST00000592965 COQ4Q9Y3A0 265 aa24.54■■□□□ 1.52
MBD3-211ENST00000592965 TBX18O95935 607 aa24.53■■□□□ 1.52
MBD3-211ENST00000592965 ATP5C1P36542 298 aaKnown RBP24.53■■□□□ 1.52
MBD3-211ENST00000592965 PSEN1P49768 467 aa24.53■■□□□ 1.52
MBD3-211ENST00000592965 GOLGA8FQ08AF8 430 aa24.53■■□□□ 1.52
MBD3-211ENST00000592965 GOLGA8DPQ0D2H9 430 aa24.53■■□□□ 1.52
MBD3-211ENST00000592965 CBWD6Q4V339 395 aa24.53■■□□□ 1.52
MBD3-211ENST00000592965 ZNF394Q53GI3 561 aa24.53■■□□□ 1.52
MBD3-211ENST00000592965 DCAF17Q5H9S7 520 aaPredicted RBP24.53■■□□□ 1.52
MBD3-211ENST00000592965 CBWD3Q5JTY5 395 aa24.53■■□□□ 1.52
MBD3-211ENST00000592965 CBWD5Q5RIA9 395 aa24.53■■□□□ 1.52
MBD3-211ENST00000592965 TCERG1LQ5VWI1 586 aa24.53■■□□□ 1.52
MBD3-211ENST00000592965 HTR3DQ70Z44 454 aa24.53■■□□□ 1.52
MBD3-211ENST00000592965 CCDC186Q7Z3E2 898 aa24.53■■□□□ 1.52
MBD3-211ENST00000592965 RASSF3Q86WH2 238 aa24.53■■□□□ 1.52
MBD3-211ENST00000592965 ELOA2Q8IYF1 753 aaPredicted RBP24.53■■□□□ 1.52
MBD3-211ENST00000592965 SLC4A11Q8NBS3 891 aa24.53■■□□□ 1.52
MBD3-211ENST00000592965 ERCC4Q92889 916 aaPredicted RBP24.53■■□□□ 1.52
MBD3-211ENST00000592965 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.53■■□□□ 1.52
MBD3-211ENST00000592965 USP3Q9Y6I4 520 aa24.53■■□□□ 1.52
MBD3-211ENST00000592965 ABCA7Q8IZY2 2146 aa24.53■■□□□ 1.52
MBD3-211ENST00000592965 A0A1W2PQH9 124 aa24.52■■□□□ 1.52
MBD3-211ENST00000592965 MED19A0JLT2 244 aaPredicted RBP24.52■■□□□ 1.52
MBD3-211ENST00000592965 ANTXRLA6NF34 631 aa24.52■■□□□ 1.52
MBD3-211ENST00000592965 TNFRSF4P43489 277 aa24.52■■□□□ 1.52
MBD3-211ENST00000592965 DGKEP52429 567 aa24.52■■□□□ 1.52
MBD3-211ENST00000592965 RAD23BP54727 409 aa24.52■■□□□ 1.52
MBD3-211ENST00000592965 KDSRQ06136 332 aa24.52■■□□□ 1.52
MBD3-211ENST00000592965 PLK5Q496M5 336 aa24.52■■□□□ 1.52
MBD3-211ENST00000592965 BTBD8Q5XKL5 378 aa24.52■■□□□ 1.52
MBD3-211ENST00000592965 ARHGAP17Q68EM7 881 aa24.52■■□□□ 1.52
MBD3-211ENST00000592965 ZNF276Q8N554 614 aa24.52■■□□□ 1.52
MBD3-211ENST00000592965 TMEM176AQ96HP8 235 aa24.52■■□□□ 1.52
MBD3-211ENST00000592965 CNOT6LQ96LI5 555 aaKnown RBP24.52■■□□□ 1.52
MBD3-211ENST00000592965 HEXIM2Q96MH2 286 aaKnown RBP24.52■■□□□ 1.52
MBD3-211ENST00000592965 ARMCX3Q9UH62 379 aaPredicted RBP24.52■■□□□ 1.52
MBD3-211ENST00000592965 PCDHGA5Q9Y5G8 931 aa24.52■■□□□ 1.52
MBD3-211ENST00000592965 NUP205Q92621 2012 aa24.51■■□□□ 1.51
MBD3-211ENST00000592965 TRIM49BA6NDI0 452 aa24.51■■□□□ 1.51
MBD3-211ENST00000592965 RARGP13631 454 aa24.51■■□□□ 1.51
MBD3-211ENST00000592965 KIR2DL1P43626 348 aaPredicted RBP24.51■■□□□ 1.51
MBD3-211ENST00000592965 CRY1Q16526 586 aa24.51■■□□□ 1.51
MBD3-211ENST00000592965 PREPLQ4J6C6 727 aaPredicted RBP24.51■■□□□ 1.51
MBD3-211ENST00000592965 TADA2BQ86TJ2 420 aa24.51■■□□□ 1.51
MBD3-211ENST00000592965 TMEM25Q86YD3 366 aa24.51■■□□□ 1.51
MBD3-211ENST00000592965 CCDC33Q8N5R6 958 aa24.51■■□□□ 1.51
MBD3-211ENST00000592965 ALLCQ8N6M5 410 aa24.51■■□□□ 1.51
MBD3-211ENST00000592965 IL17RCQ8NAC3 791 aa24.51■■□□□ 1.51
MBD3-211ENST00000592965 TATDN2Q93075 761 aa24.51■■□□□ 1.51
MBD3-211ENST00000592965 SLC35C1Q96A29 364 aa24.51■■□□□ 1.51
MBD3-211ENST00000592965 ARRDC1-AS1Q9H2J1 176 aa24.51■■□□□ 1.51
MBD3-211ENST00000592965 CLIC5Q9NZA1 410 aa24.51■■□□□ 1.51
MBD3-211ENST00000592965 DNMT3LQ9UJW3 386 aa24.51■■□□□ 1.51
MBD3-211ENST00000592965 LSM7Q9UK45 103 aaKnown RBP24.51■■□□□ 1.51
MBD3-211ENST00000592965 PLXND1Q9Y4D7 1925 aa24.51■■□□□ 1.51
MBD3-211ENST00000592965 PSMA7O14818 248 aa24.5■■□□□ 1.51
MBD3-211ENST00000592965 SLC30A4O14863 429 aa24.5■■□□□ 1.51
MBD3-211ENST00000592965 TULP3O75386 442 aa24.5■■□□□ 1.51
MBD3-211ENST00000592965 STIM1Q13586 685 aa24.5■■□□□ 1.51
MBD3-211ENST00000592965 SCD5Q86SK9 330 aa24.5■■□□□ 1.51
MBD3-211ENST00000592965 C11orf74Q86VG3 221 aa24.5■■□□□ 1.51
MBD3-211ENST00000592965 TXNDC5Q8NBS9 432 aaKnown RBP24.5■■□□□ 1.51
MBD3-211ENST00000592965 CDK5RAP1Q96SZ6 601 aaKnown RBP24.5■■□□□ 1.51
MBD3-211ENST00000592965 UBXN6Q9BZV1 441 aa24.5■■□□□ 1.51
MBD3-211ENST00000592965 DUSP15Q9H1R2 295 aaPredicted RBP24.5■■□□□ 1.51
MBD3-211ENST00000592965 MARK1Q9P0L2 795 aa24.5■■□□□ 1.51
MBD3-211ENST00000592965 DEC1Q9P2X7 70 aa24.5■■□□□ 1.51
MBD3-211ENST00000592965 NAGPAQ9UK23 515 aa24.5■■□□□ 1.51
MBD3-211ENST00000592965 THADAQ6YHU6 1953 aa24.5■■□□□ 1.51
MBD3-211ENST00000592965 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.49■■□□□ 1.51
MBD3-211ENST00000592965 KLF8O95600 359 aaPredicted RBP24.49■■□□□ 1.51
MBD3-211ENST00000592965 ZNF806P0C7X5 589 aa24.49■■□□□ 1.51
MBD3-211ENST00000592965 TIE1P35590 1138 aa24.49■■□□□ 1.51
MBD3-211ENST00000592965 PPP1R2P41236 205 aa24.49■■□□□ 1.51
MBD3-211ENST00000592965 PLA2G4AP47712 749 aa24.49■■□□□ 1.51
MBD3-211ENST00000592965 CUL2Q13617 745 aa24.49■■□□□ 1.51
MBD3-211ENST00000592965 ELF2Q15723 593 aa24.49■■□□□ 1.51
MBD3-211ENST00000592965 ANO4Q32M45 955 aa24.49■■□□□ 1.51
MBD3-211ENST00000592965 USP39Q53GS9 565 aaKnown RBP24.49■■□□□ 1.51
MBD3-211ENST00000592965 PLA2G2CQ5R387 149 aa24.49■■□□□ 1.51
MBD3-211ENST00000592965 C10orf120Q5SQS8 335 aa24.49■■□□□ 1.51
MBD3-211ENST00000592965 ANO7Q6IWH7 933 aa24.49■■□□□ 1.51
MBD3-211ENST00000592965 TMEM92Q6UXU6 159 aa24.49■■□□□ 1.51
MBD3-211ENST00000592965 NAT16Q8N8M0 369 aa24.49■■□□□ 1.51
MBD3-211ENST00000592965 KCNV2Q8TDN2 545 aa24.49■■□□□ 1.51
MBD3-211ENST00000592965 DHTKD1Q96HY7 919 aaPredicted RBP24.49■■□□□ 1.51
MBD3-211ENST00000592965 SGK1O00141 431 aa24.48■■□□□ 1.51
MBD3-211ENST00000592965 DCLK1O15075 740 aa24.48■■□□□ 1.51
MBD3-211ENST00000592965 MDM4O15151 490 aa24.48■■□□□ 1.51
MBD3-211ENST00000592965 TPRP12270 2363 aaKnown RBP24.48■■□□□ 1.51
MBD3-211ENST00000592965 HNRNPLP14866 589 aaKnown RBP eCLIP24.48■■□□□ 1.51
MBD3-211ENST00000592965 EOGTQ5NDL2 527 aa24.48■■□□□ 1.51
MBD3-211ENST00000592965 Q6ZNB5 142 aa24.48■■□□□ 1.51
MBD3-211ENST00000592965 TERB1Q8NA31 727 aa24.48■■□□□ 1.51
MBD3-211ENST00000592965 ANKRD52Q8NB46 1076 aa24.48■■□□□ 1.51
MBD3-211ENST00000592965 MDGA1Q8NFP4 955 aa24.48■■□□□ 1.51
MBD3-211ENST00000592965 CEP63Q96MT8 703 aa24.48■■□□□ 1.51
MBD3-211ENST00000592965 METTL14Q9HCE5 456 aaKnown RBP24.48■■□□□ 1.51
MBD3-211ENST00000592965 MAN1B1Q9UKM7 699 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms