RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 CYLDQ9NQC7 956 aa16.96■□□□□ 0.31
CIRBP-240ENST00000592815 RAB20Q9NX57 234 aa16.96■□□□□ 0.31
CIRBP-240ENST00000592815 DEC1Q9P2X7 70 aa16.96■□□□□ 0.31
CIRBP-240ENST00000592815 NUDT5Q9UKK9 219 aa16.96■□□□□ 0.31
CIRBP-240ENST00000592815 PCDHGA5Q9Y5G8 931 aa16.96■□□□□ 0.31
CIRBP-240ENST00000592815 PCDHA5Q9Y5H7 936 aa16.96■□□□□ 0.31
CIRBP-240ENST00000592815 HELZP42694 1942 aaKnown RBP16.96■□□□□ 0.3
CIRBP-240ENST00000592815 SGK1O00141 431 aa16.95■□□□□ 0.3
CIRBP-240ENST00000592815 HOXC11O43248 304 aaPredicted RBP16.95■□□□□ 0.3
CIRBP-240ENST00000592815 GREM1O60565 184 aa16.95■□□□□ 0.3
CIRBP-240ENST00000592815 TULP3O75386 442 aa16.95■□□□□ 0.3
CIRBP-240ENST00000592815 ALDH1A2O94788 518 aa16.95■□□□□ 0.3
CIRBP-240ENST00000592815 RARGP13631 454 aa16.95■□□□□ 0.3
CIRBP-240ENST00000592815 HNRNPLP14866 589 aaKnown RBP eCLIP16.95■□□□□ 0.3
CIRBP-240ENST00000592815 MPLP40238 635 aa16.95■□□□□ 0.3
CIRBP-240ENST00000592815 KIR2DL1P43626 348 aaPredicted RBP16.95■□□□□ 0.3
CIRBP-240ENST00000592815 MXI1P50539 228 aa16.95■□□□□ 0.3
CIRBP-240ENST00000592815 KIF11P52732 1056 aa16.95■□□□□ 0.3
CIRBP-240ENST00000592815 BECN1Q14457 450 aa16.95■□□□□ 0.3
CIRBP-240ENST00000592815 PLA2G2CQ5R387 149 aa16.95■□□□□ 0.3
CIRBP-240ENST00000592815 ZNF658Q5TYW1 1059 aaPredicted RBP16.95■□□□□ 0.3
CIRBP-240ENST00000592815 RASSF3Q86WH2 238 aa16.95■□□□□ 0.3
CIRBP-240ENST00000592815 ETFBKMTQ8IXQ9 262 aa16.95■□□□□ 0.3
CIRBP-240ENST00000592815 PHTF2Q8N3S3 785 aa16.95■□□□□ 0.3
CIRBP-240ENST00000592815 TATDN2Q93075 761 aa16.95■□□□□ 0.3
CIRBP-240ENST00000592815 CNOT6LQ96LI5 555 aaKnown RBP16.95■□□□□ 0.3
CIRBP-240ENST00000592815 TSG101Q99816 390 aa16.95■□□□□ 0.3
CIRBP-240ENST00000592815 DUSP9Q99956 384 aaKnown RBP16.95■□□□□ 0.3
CIRBP-240ENST00000592815 PNPLA8Q9NP80 782 aa16.95■□□□□ 0.3
CIRBP-240ENST00000592815 RXFP3Q9NSD7 469 aa16.95■□□□□ 0.3
CIRBP-240ENST00000592815 CISHQ9NSE2 258 aa16.95■□□□□ 0.3
CIRBP-240ENST00000592815 NAGPAQ9UK23 515 aa16.95■□□□□ 0.3
CIRBP-240ENST00000592815 MDM4O15151 490 aa16.94■□□□□ 0.3
CIRBP-240ENST00000592815 TRIM24O15164 1050 aa16.94■□□□□ 0.3
CIRBP-240ENST00000592815 SMC2O95347 1197 aa16.94■□□□□ 0.3
CIRBP-240ENST00000592815 CHRM1P11229 460 aaPredicted RBP16.94■□□□□ 0.3
CIRBP-240ENST00000592815 PLA2G4AP47712 749 aa16.94■□□□□ 0.3
CIRBP-240ENST00000592815 CREB5Q02930 508 aa16.94■□□□□ 0.3
CIRBP-240ENST00000592815 GOLGA8FQ08AF8 430 aa16.94■□□□□ 0.3
CIRBP-240ENST00000592815 GOLGA8DPQ0D2H9 430 aa16.94■□□□□ 0.3
CIRBP-240ENST00000592815 HSF5Q4G112 596 aaPredicted RBP16.94■□□□□ 0.3
CIRBP-240ENST00000592815 PREPLQ4J6C6 727 aaPredicted RBP16.94■□□□□ 0.3
CIRBP-240ENST00000592815 EOGTQ5NDL2 527 aa16.94■□□□□ 0.3
CIRBP-240ENST00000592815 C10orf120Q5SQS8 335 aa16.94■□□□□ 0.3
CIRBP-240ENST00000592815 TCERG1LQ5VWI1 586 aa16.94■□□□□ 0.3
CIRBP-240ENST00000592815 ANKRD40Q6AI12 368 aa16.94■□□□□ 0.3
CIRBP-240ENST00000592815 SCD5Q86SK9 330 aa16.94■□□□□ 0.3
CIRBP-240ENST00000592815 TTC39CQ8N584 583 aa16.94■□□□□ 0.3
CIRBP-240ENST00000592815 SLC4A11Q8NBS3 891 aa16.94■□□□□ 0.3
CIRBP-240ENST00000592815 ENGASEQ8NFI3 743 aa16.94■□□□□ 0.3
CIRBP-240ENST00000592815 MDGA1Q8NFP4 955 aa16.94■□□□□ 0.3
CIRBP-240ENST00000592815 ERCC4Q92889 916 aaPredicted RBP16.94■□□□□ 0.3
CIRBP-240ENST00000592815 TMEM176AQ96HP8 235 aa16.94■□□□□ 0.3
CIRBP-240ENST00000592815 FAXDC2Q96IV6 333 aa16.94■□□□□ 0.3
CIRBP-240ENST00000592815 GSDMAQ96QA5 445 aa16.94■□□□□ 0.3
CIRBP-240ENST00000592815 POLMQ9NP87 494 aaPredicted RBP16.94■□□□□ 0.3
CIRBP-240ENST00000592815 VPS45Q9NRW7 570 aa16.94■□□□□ 0.3
CIRBP-240ENST00000592815 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.94■□□□□ 0.3
CIRBP-240ENST00000592815 DNMT3LQ9UJW3 386 aa16.94■□□□□ 0.3
CIRBP-240ENST00000592815 LSM7Q9UK45 103 aaKnown RBP16.94■□□□□ 0.3
CIRBP-240ENST00000592815 MYOFQ9NZM1 2061 aa16.93■□□□□ 0.3
CIRBP-240ENST00000592815 RALGAPA1Q6GYQ0 2036 aa16.93■□□□□ 0.3
CIRBP-240ENST00000592815 ADAM23O75077 832 aa16.93■□□□□ 0.3
CIRBP-240ENST00000592815 CAVIN2O95810 425 aa16.93■□□□□ 0.3
CIRBP-240ENST00000592815 RAD23BP54727 409 aa16.93■□□□□ 0.3
CIRBP-240ENST00000592815 NUCB2P80303 420 aa16.93■□□□□ 0.3
CIRBP-240ENST00000592815 FKBP3Q00688 224 aaKnown RBP16.93■□□□□ 0.3
CIRBP-240ENST00000592815 DCAF17Q5H9S7 520 aaPredicted RBP16.93■□□□□ 0.3
CIRBP-240ENST00000592815 PPM1JQ5JR12 505 aa16.93■□□□□ 0.3
CIRBP-240ENST00000592815 IL31Q6EBC2 164 aa16.93■□□□□ 0.3
CIRBP-240ENST00000592815 KLHDC10Q6PID8 442 aa16.93■□□□□ 0.3
CIRBP-240ENST00000592815 TPGS1Q6ZTW0 290 aa16.93■□□□□ 0.3
CIRBP-240ENST00000592815 NUDT18Q6ZVK8 323 aa16.93■□□□□ 0.3
CIRBP-240ENST00000592815 CCDC186Q7Z3E2 898 aa16.93■□□□□ 0.3
CIRBP-240ENST00000592815 C11orf74Q86VG3 221 aa16.93■□□□□ 0.3
CIRBP-240ENST00000592815 SMARCE1Q969G3 411 aa16.93■□□□□ 0.3
CIRBP-240ENST00000592815 ARID3AQ99856 593 aa16.93■□□□□ 0.3
CIRBP-240ENST00000592815 BBS2Q9BXC9 721 aa16.93■□□□□ 0.3
CIRBP-240ENST00000592815 WDR35Q9P2L0 1181 aa16.93■□□□□ 0.3
CIRBP-240ENST00000592815 CIZ1Q9ULV3 898 aaPredicted RBP16.93■□□□□ 0.3
CIRBP-240ENST00000592815 USP3Q9Y6I4 520 aa16.93■□□□□ 0.3
CIRBP-240ENST00000592815 BCLAF3A2AJT9 711 aaKnown RBP16.92■□□□□ 0.3
CIRBP-240ENST00000592815 NEDD8-MDP1E9PL57 170 aa16.92■□□□□ 0.3
CIRBP-240ENST00000592815 RALAP11233 206 aa16.92■□□□□ 0.3
CIRBP-240ENST00000592815 BCKDHBP21953 392 aa16.92■□□□□ 0.3
CIRBP-240ENST00000592815 PSEN1P49768 467 aa16.92■□□□□ 0.3
CIRBP-240ENST00000592815 LIMK1P53667 647 aa16.92■□□□□ 0.3
CIRBP-240ENST00000592815 PMS1P54277 932 aaKnown RBP16.92■□□□□ 0.3
CIRBP-240ENST00000592815 CBWD6Q4V339 395 aa16.92■□□□□ 0.3
CIRBP-240ENST00000592815 COBLL1Q53SF7 1204 aa16.92■□□□□ 0.3
CIRBP-240ENST00000592815 CBWD3Q5JTY5 395 aa16.92■□□□□ 0.3
CIRBP-240ENST00000592815 CBWD5Q5RIA9 395 aa16.92■□□□□ 0.3
CIRBP-240ENST00000592815 C10orf76Q5T2E6 689 aa16.92■□□□□ 0.3
CIRBP-240ENST00000592815 STPG1Q5TH74 334 aa16.92■□□□□ 0.3
CIRBP-240ENST00000592815 GRAMD4Q6IC98 578 aa16.92■□□□□ 0.3
CIRBP-240ENST00000592815 TCEAL6Q6IPX3 200 aa16.92■□□□□ 0.3
CIRBP-240ENST00000592815 TADA2BQ86TJ2 420 aa16.92■□□□□ 0.3
CIRBP-240ENST00000592815 MIB1Q86YT6 1006 aa16.92■□□□□ 0.3
CIRBP-240ENST00000592815 PGBD3Q8N328 593 aa16.92■□□□□ 0.3
CIRBP-240ENST00000592815 ZNF513Q8N8E2 541 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms