RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 PDZD4Q76G19 769 aaPredicted RBP10.82□□□□□ -0.68
VPS25-206ENST00000591584 BNIPLQ7Z465 357 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 ZNF598Q86UK7 904 aaKnown RBP10.82□□□□□ -0.68
VPS25-206ENST00000591584 CDKL3Q8IVW4 592 aaPredicted RBP10.82□□□□□ -0.68
VPS25-206ENST00000591584 PLD5Q8N7P1 536 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 OR2W6PQ8NHA6 318 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 URGCPQ8TCY9 931 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 RTP4Q96DX8 246 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 PGAP3Q96FM1 320 aaPredicted RBP10.82□□□□□ -0.68
VPS25-206ENST00000591584 SLC2A13Q96QE2 648 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 RBM15Q96T37 977 aaKnown RBP eCLIP10.82□□□□□ -0.68
VPS25-206ENST00000591584 TMEM121Q9BTD3 319 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 SNRNP25Q9BV90 132 aaKnown RBP10.82□□□□□ -0.68
VPS25-206ENST00000591584 B3GNT5Q9BYG0 378 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 ADAM7Q9H2U9 754 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 ELAC1Q9H777 363 aaKnown RBP10.82□□□□□ -0.68
VPS25-206ENST00000591584 CSNK1G1Q9HCP0 422 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 CALCOCO1Q9P1Z2 691 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 FARP1Q9Y4F1 1045 aaPredicted RBP10.82□□□□□ -0.68
VPS25-206ENST00000591584 ACTL7BQ9Y614 415 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 PDCD11Q14690 1871 aaKnown RBP10.81□□□□□ -0.68
VPS25-206ENST00000591584 SCN1AP35498 2009 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 ARVCFO00192 962 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 PIK3R2O00459 728 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 CAPN9O14815 690 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 CHADO15335 359 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 TRAPPC3O43617 180 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 FKTNO75072 461 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 CDH16O75309 829 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 AP1G2O75843 785 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 B3GAT3O94766 335 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 CD48P09326 243 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 CKBP12277 381 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 TKTP29401 623 aaKnown RBP10.81□□□□□ -0.68
VPS25-206ENST00000591584 L1CAMP32004 1257 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 CHKAP35790 457 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 HCAR3P49019 387 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 SULT1E1P49888 294 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 APLP1P51693 650 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 TKTL1P51854 596 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 MAGOHP61326 146 aaKnown RBP10.81□□□□□ -0.68
VPS25-206ENST00000591584 DYNLT1P63172 113 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 TSPY1Q01534 308 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 ADCY1Q08828 1119 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 TAF5Q15542 800 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 CCDC142Q17RM4 750 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 ARL13BQ3SXY8 428 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 TIGD5Q53EQ6 642 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 MDH1BQ5I0G3 518 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 SH3PXD2AQ5TCZ1 1133 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 GLB1LQ6UWU2 654 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 C4orf50Q6ZRC1 276 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 FAM35AQ86V20 835 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 SPATS2Q86XZ4 545 aaKnown RBP10.81□□□□□ -0.68
VPS25-206ENST00000591584 TDRPQ86YL5 185 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 DEFB106AQ8N104 65 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 PDIK1LQ8N165 341 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 NAT8LQ8N9F0 302 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 CD99L2Q8TCZ2 262 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 PRCCQ92733 491 aaPredicted RBP10.81□□□□□ -0.68
VPS25-206ENST00000591584 LPPQ93052 612 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 NTAN1Q96AB6 310 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 FAM149B1Q96BN6 582 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 ACSF2Q96CM8 615 aaPredicted RBP10.81□□□□□ -0.68
VPS25-206ENST00000591584 PIWIL1Q96J94 861 aaKnown RBP10.81□□□□□ -0.68
VPS25-206ENST00000591584 SUSD3Q96L08 255 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 NPY6RQ99463 290 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 NRDE2Q9H7Z3 1164 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 CRTAC1Q9NQ79 661 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 STARD7Q9NQZ5 370 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 NINJ2Q9NZG7 142 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 FZD10Q9ULW2 581 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 AP4E1Q9UPM8 1137 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 PHF24Q9UPV7 400 aa10.81□□□□□ -0.68
VPS25-206ENST00000591584 SF3B1O75533 1304 aaKnown RBP eCLIP10.81□□□□□ -0.68
VPS25-206ENST00000591584 TLDC2A0PJX2 215 aa10.8□□□□□ -0.68
VPS25-206ENST00000591584 CASTOR2A6NHX0 329 aa10.8□□□□□ -0.68
VPS25-206ENST00000591584 E7ESA3 106 aa10.8□□□□□ -0.68
VPS25-206ENST00000591584 H3BRJ5 948 aa10.8□□□□□ -0.68
VPS25-206ENST00000591584 H7C0C1 242 aa10.8□□□□□ -0.68
VPS25-206ENST00000591584 MGEA5O60502 916 aa10.8□□□□□ -0.68
VPS25-206ENST00000591584 SPAG6O75602 509 aa10.8□□□□□ -0.68
VPS25-206ENST00000591584 TRPA1O75762 1119 aa10.8□□□□□ -0.68
VPS25-206ENST00000591584 PARNO95453 639 aaKnown RBP10.8□□□□□ -0.68
VPS25-206ENST00000591584 ZBED1O96006 694 aa10.8□□□□□ -0.68
VPS25-206ENST00000591584 SHBGP04278 402 aa10.8□□□□□ -0.68
VPS25-206ENST00000591584 CYP2F1P24903 491 aa10.8□□□□□ -0.68
VPS25-206ENST00000591584 RPL22P35268 128 aaKnown RBP10.8□□□□□ -0.68
VPS25-206ENST00000591584 MMP13P45452 471 aa10.8□□□□□ -0.68
VPS25-206ENST00000591584 ATP5OP48047 213 aa10.8□□□□□ -0.68
VPS25-206ENST00000591584 CTCFP49711 727 aaPredicted RBP10.8□□□□□ -0.68
VPS25-206ENST00000591584 VPS41P49754 854 aa10.8□□□□□ -0.68
VPS25-206ENST00000591584 MAP3K7CLP57077 242 aa10.8□□□□□ -0.68
VPS25-206ENST00000591584 DAOAP59103 153 aa10.8□□□□□ -0.68
VPS25-206ENST00000591584 ADIGQ0VDE8 80 aa10.8□□□□□ -0.68
VPS25-206ENST00000591584 AUHQ13825 339 aaKnown RBP10.8□□□□□ -0.68
VPS25-206ENST00000591584 KYNUQ16719 465 aa10.8□□□□□ -0.68
VPS25-206ENST00000591584 INTS6LQ5JSJ4 861 aaKnown RBP10.8□□□□□ -0.68
VPS25-206ENST00000591584 LHX8Q68G74 356 aa10.8□□□□□ -0.68
VPS25-206ENST00000591584 PM20D1Q6GTS8 502 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms