RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, human

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP1-216	ENST00000590887	BSPRY	Q5W0U4	402 aa		13.55	□□□□□ -0.24
PTBP1-216	ENST00000590887	SPOCD1	Q6ZMY3	1216 aa		13.55	□□□□□ -0.24
PTBP1-216	ENST00000590887	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.55	□□□□□ -0.24
PTBP1-216	ENST00000590887	BZW1	Q7L1Q6	419 aa	Known RBP	13.55	□□□□□ -0.24
PTBP1-216	ENST00000590887	C16orf59	Q7L2K0	433 aa		13.55	□□□□□ -0.24
PTBP1-216	ENST00000590887	PDZD8	Q8NEN9	1154 aa		13.55	□□□□□ -0.24
PTBP1-216	ENST00000590887	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.55	□□□□□ -0.24
PTBP1-216	ENST00000590887	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
PTBP1-216	ENST00000590887	CLP1	Q92989	425 aa	Known RBP	13.55	□□□□□ -0.24
PTBP1-216	ENST00000590887	MAGOHB	Q96A72	148 aa	Known RBP	13.55	□□□□□ -0.24
PTBP1-216	ENST00000590887	RNF25	Q96BH1	459 aa	Predicted RBP	13.55	□□□□□ -0.24
PTBP1-216	ENST00000590887	SAMD11	Q96NU1	681 aa		13.55	□□□□□ -0.24
PTBP1-216	ENST00000590887	SLITRK1	Q96PX8	696 aa		13.55	□□□□□ -0.24
PTBP1-216	ENST00000590887	NPY6R	Q99463	290 aa		13.55	□□□□□ -0.24
PTBP1-216	ENST00000590887	SEPT5	Q99719	369 aa	Predicted RBP	13.55	□□□□□ -0.24
PTBP1-216	ENST00000590887	EMILIN2	Q9BXX0	1053 aa		13.55	□□□□□ -0.24
PTBP1-216	ENST00000590887	RAB17	Q9H0T7	212 aa		13.55	□□□□□ -0.24
PTBP1-216	ENST00000590887	TLR8	Q9NR97	1041 aa	Known RBP	13.55	□□□□□ -0.24
PTBP1-216	ENST00000590887	RBM12	Q9NTZ6	932 aa	Known RBP	13.55	□□□□□ -0.24
PTBP1-216	ENST00000590887	TNFRSF10B	O14763	440 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	GABBR2	O75899	941 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	FGF18	O76093	207 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	RB1	P06400	928 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	RHOXF2B	P0C7M4	288 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	CSH1	P0DML2	217 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	CSH2	P0DML3	217 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	RARA	P10276	462 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	CTSA	P10619	480 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	SLC2A3	P11169	496 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	PBX3	P40426	434 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	ARL4A	P40617	200 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	PPP3CC	P48454	512 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	NDUFV1	P49821	464 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	ROR1	Q01973	937 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	RAB33A	Q14088	237 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	TAF5	Q15542	800 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	ELF2	Q15723	593 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	EFHC2	Q5JST6	749 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	KLHL7	Q8IXQ5	586 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	VPS52	Q8N1B4	723 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	SLC7A14	Q8TBB6	771 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	CCHCR1	Q8TD31	782 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	SP7	Q8TDD2	431 aa	Predicted RBP	13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	CLEC4C	Q8WTT0	213 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.54	□□□□□ -0.24	2e-6	■■■■■ 50.8
PTBP1-216	ENST00000590887	OVCA2	Q8WZ82	227 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	TSC1	Q92574	1164 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	NT5C3B	Q969T7	300 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	PGLYRP2	Q96PD5	576 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	KRT12	Q99456	494 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	RHOXF2	Q9BQY4	288 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	AP1M1	Q9BXS5	423 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	FAM204A	Q9H8W3	233 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	UXT	Q9UBK9	157 aa	Predicted RBP	13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	SLC12A6	Q9UHW9	1150 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	UTP11	Q9Y3A2	253 aa	Known RBP	13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	PATJ	Q8NI35	1801 aa		13.54	□□□□□ -0.24
PTBP1-216	ENST00000590887	YJEFN3	A6XGL0	299 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887		E7ENQ6	273 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	C1R	P00736	705 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	ATF2	P15336	505 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	MARCKSL1	P49006	195 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	KPNA1	P52294	538 aa	Predicted RBP	13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	CDH6	P55285	790 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	DUSP4	Q13115	394 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	CCNG2	Q16589	344 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	CYP1B1	Q16678	543 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	WDR93	Q6P2C0	686 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	ELMSAN1	Q6PJG2	1045 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	RNF19B	Q6ZMZ0	732 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	PDZD4	Q76G19	769 aa	Predicted RBP	13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	RTL10	Q7L3V2	364 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	TAS1R1	Q7RTX1	841 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	ITIH5	Q86UX2	942 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	TMEM173	Q86WV6	379 aa	Predicted RBP	13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	CCDC105	Q8IYK2	499 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	C12orf50	Q8NA57	414 aa	Predicted RBP	13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	ATAD1	Q8NBU5	361 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	NOA1	Q8NC60	698 aa	Known RBP	13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	STKLD1	Q8NE28	680 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	ATL2	Q8NHH9	583 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	HSPH1	Q92598	858 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	RNF34	Q969K3	372 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	FBXO32	Q969P5	355 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	NTAN1	Q96AB6	310 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	LRRC19	Q9H756	370 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	RXFP1	Q9HBX9	757 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	CLIC5	Q9NZA1	410 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	IL37	Q9NZH6	218 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	STIM2	Q9P246	746 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	HCST	Q9UBK5	93 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887		V9GYY5	206 aa	Predicted RBP	13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	COL4A6	Q14031	1691 aa		13.53	□□□□□ -0.24
PTBP1-216	ENST00000590887	WDR27	A2RRH5	827 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms