RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 TRIM24O15164 1050 aa22.98■■□□□ 1.27
DDX39A-215ENST00000590696 MAPK13O15264 365 aa22.98■■□□□ 1.27
DDX39A-215ENST00000590696 MAP3K13O43283 966 aa22.98■■□□□ 1.27
DDX39A-215ENST00000590696 NR2F2P24468 414 aa22.98■■□□□ 1.27
DDX39A-215ENST00000590696 SYKP43405 635 aa22.98■■□□□ 1.27
DDX39A-215ENST00000590696 ZNF513Q8N8E2 541 aaPredicted RBP22.98■■□□□ 1.27
DDX39A-215ENST00000590696 PIGKQ92643 395 aa22.98■■□□□ 1.27
DDX39A-215ENST00000590696 CCDC47Q96A33 483 aaKnown RBP22.98■■□□□ 1.27
DDX39A-215ENST00000590696 CYFIP2Q96F07 1278 aa22.98■■□□□ 1.27
DDX39A-215ENST00000590696 SPACA7Q96KW9 195 aa22.98■■□□□ 1.27
DDX39A-215ENST00000590696 IMPG2Q9BZV3 1241 aa22.98■■□□□ 1.27
DDX39A-215ENST00000590696 APOBEC3GQ9HC16 384 aaKnown RBP22.98■■□□□ 1.27
DDX39A-215ENST00000590696 OSER1Q9NX31 292 aa22.98■■□□□ 1.27
DDX39A-215ENST00000590696 MAPK8IP1Q9UQF2 711 aa22.98■■□□□ 1.27
DDX39A-215ENST00000590696 ACACBO00763 2458 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 HHLA1C9JL84 531 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 GREM1O60565 184 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 RHOBTB3O94955 611 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 TRIM49P0CI25 452 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 TRIM49CP0CI26 452 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 ACO1P21399 889 aaKnown RBP22.97■■□□□ 1.27
DDX39A-215ENST00000590696 ATP5C1P36542 298 aaKnown RBP22.97■■□□□ 1.27
DDX39A-215ENST00000590696 GCLMP48507 274 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 NDUFA8P51970 172 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 KRT85P78386 507 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 INCA1Q0VD86 236 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 C10orf76Q5T2E6 689 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 DAB2IPQ5VWQ8 1189 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 PSAPL1Q6NUJ1 521 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 NUDT18Q6ZVK8 323 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 INTS8Q75QN2 995 aaKnown RBP22.97■■□□□ 1.27
DDX39A-215ENST00000590696 LPCAT2Q7L5N7 544 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 TRMT11Q7Z4G4 463 aaKnown RBP22.97■■□□□ 1.27
DDX39A-215ENST00000590696 TMEFF1Q8IYR6 380 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 TERB1Q8NA31 727 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 KCNV2Q8TDN2 545 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 TAS1R2Q8TE23 839 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 NT5C1AQ9BXI3 368 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 CYLDQ9NQC7 956 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 MBD1Q9UIS9 605 aaPredicted RBP22.97■■□□□ 1.27
DDX39A-215ENST00000590696 SCML2Q9UQR0 700 aa22.97■■□□□ 1.27
DDX39A-215ENST00000590696 CYP26A1O43174 497 aa22.96■■□□□ 1.27
DDX39A-215ENST00000590696 IRX4P78413 519 aa22.96■■□□□ 1.27
DDX39A-215ENST00000590696 PPP3CAQ08209 521 aa22.96■■□□□ 1.27
DDX39A-215ENST00000590696 BYSLQ13895 437 aaKnown RBP22.96■■□□□ 1.27
DDX39A-215ENST00000590696 NFIL3Q16649 462 aa22.96■■□□□ 1.27
DDX39A-215ENST00000590696 ST3GAL2Q16842 350 aa22.96■■□□□ 1.27
DDX39A-215ENST00000590696 MAP7D1Q3KQU3 841 aa22.96■■□□□ 1.27
DDX39A-215ENST00000590696 MMRN2Q9H8L6 949 aa22.96■■□□□ 1.27
DDX39A-215ENST00000590696 CYP3A43Q9HB55 503 aa22.96■■□□□ 1.27
DDX39A-215ENST00000590696 NMUR1Q9HB89 426 aa22.96■■□□□ 1.27
DDX39A-215ENST00000590696 TMEM9BQ9NQ34 198 aa22.96■■□□□ 1.27
DDX39A-215ENST00000590696 LSM7Q9UK45 103 aaKnown RBP22.96■■□□□ 1.27
DDX39A-215ENST00000590696 HCN2Q9UL51 889 aa22.96■■□□□ 1.27
DDX39A-215ENST00000590696 ZDHHC9Q9Y397 364 aa22.96■■□□□ 1.27
DDX39A-215ENST00000590696 FAM237AA0A1B0GTK4 181 aa22.95■■□□□ 1.26
DDX39A-215ENST00000590696 CNOT1A5YKK6 2376 aaKnown RBP22.95■■□□□ 1.26
DDX39A-215ENST00000590696 NEDD8-MDP1E9PL57 170 aa22.95■■□□□ 1.26
DDX39A-215ENST00000590696 KRT13P13646 458 aa22.95■■□□□ 1.26
DDX39A-215ENST00000590696 CD58P19256 250 aa22.95■■□□□ 1.26
DDX39A-215ENST00000590696 GOLGA8FQ08AF8 430 aa22.95■■□□□ 1.26
DDX39A-215ENST00000590696 GOLGA8DPQ0D2H9 430 aa22.95■■□□□ 1.26
DDX39A-215ENST00000590696 DPYDQ12882 1025 aa22.95■■□□□ 1.26
DDX39A-215ENST00000590696 GRAMD4Q6IC98 578 aa22.95■■□□□ 1.26
DDX39A-215ENST00000590696 TPGS1Q6ZTW0 290 aa22.95■■□□□ 1.26
DDX39A-215ENST00000590696 ARMCX6Q7L4S7 300 aa22.95■■□□□ 1.26
DDX39A-215ENST00000590696 FAM186BQ8IYM0 893 aa22.95■■□□□ 1.26
DDX39A-215ENST00000590696 XPO6Q96QU8 1125 aaKnown RBP22.95■■□□□ 1.26
DDX39A-215ENST00000590696 BBS2Q9BXC9 721 aa22.95■■□□□ 1.26
DDX39A-215ENST00000590696 PNPLA8Q9NP80 782 aa22.95■■□□□ 1.26
DDX39A-215ENST00000590696 DNAJC17Q9NVM6 304 aaKnown RBP22.95■■□□□ 1.26
DDX39A-215ENST00000590696 NUDT5Q9UKK9 219 aa22.95■■□□□ 1.26
DDX39A-215ENST00000590696 PCDHA5Q9Y5H7 936 aa22.95■■□□□ 1.26
DDX39A-215ENST00000590696 EPG5Q9HCE0 2579 aa22.95■■□□□ 1.26
DDX39A-215ENST00000590696 KMT2BQ9UMN6 2715 aaPredicted RBP22.94■■□□□ 1.26
DDX39A-215ENST00000590696 A0A1W2PQH9 124 aa22.94■■□□□ 1.26
DDX39A-215ENST00000590696 CDX4O14627 284 aaPredicted RBP22.94■■□□□ 1.26
DDX39A-215ENST00000590696 CILPO75339 1184 aa22.94■■□□□ 1.26
DDX39A-215ENST00000590696 RARGP13631 454 aa22.94■■□□□ 1.26
DDX39A-215ENST00000590696 TYRP14679 529 aa22.94■■□□□ 1.26
DDX39A-215ENST00000590696 PSMC2P35998 433 aaKnown RBP22.94■■□□□ 1.26
DDX39A-215ENST00000590696 WASP42768 502 aa22.94■■□□□ 1.26
DDX39A-215ENST00000590696 PTGER3P43115 390 aa22.94■■□□□ 1.26
DDX39A-215ENST00000590696 NOVA1P51513 510 aaKnown RBP22.94■■□□□ 1.26
DDX39A-215ENST00000590696 ADAM9Q13443 819 aa22.94■■□□□ 1.26
DDX39A-215ENST00000590696 MIB1Q86YT6 1006 aa22.94■■□□□ 1.26
DDX39A-215ENST00000590696 NIF3L1Q9GZT8 377 aa22.94■■□□□ 1.26
DDX39A-215ENST00000590696 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.94■■□□□ 1.267e-9■□□□□ 9.8
DDX39A-215ENST00000590696 STARD13Q9Y3M8 1113 aa22.94■■□□□ 1.26
DDX39A-215ENST00000590696 MDM4O15151 490 aa22.93■■□□□ 1.26
DDX39A-215ENST00000590696 CACNG3O60359 315 aa22.93■■□□□ 1.26
DDX39A-215ENST00000590696 HOXB2P14652 356 aa22.93■■□□□ 1.26
DDX39A-215ENST00000590696 GABRG2P18507 467 aa22.93■■□□□ 1.26
DDX39A-215ENST00000590696 RPL13P26373 211 aaKnown RBP22.93■■□□□ 1.26
DDX39A-215ENST00000590696 NTSR1P30989 418 aa22.93■■□□□ 1.26
DDX39A-215ENST00000590696 SHC2P98077 582 aa22.93■■□□□ 1.26
DDX39A-215ENST00000590696 KRBA2Q6ZNG9 492 aa22.93■■□□□ 1.26
DDX39A-215ENST00000590696 GUF1Q8N442 669 aaKnown RBP22.93■■□□□ 1.26
DDX39A-215ENST00000590696 CCDC150Q8NCX0 1101 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms