RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 GABRG3Q99928 467 aa18.39■□□□□ 0.53
RETREG3-210ENST00000590541 ZNF518BQ9C0D4 1074 aa18.39■□□□□ 0.53
RETREG3-210ENST00000590541 TNMDQ9H2S6 317 aa18.39■□□□□ 0.53
RETREG3-210ENST00000590541 DPEP3Q9H4B8 488 aa18.39■□□□□ 0.53
RETREG3-210ENST00000590541 SCUBE2Q9NQ36 999 aa18.39■□□□□ 0.53
RETREG3-210ENST00000590541 TFIP11Q9UBB9 837 aaKnown RBP18.39■□□□□ 0.53
RETREG3-210ENST00000590541 CFAP45Q9UL16 551 aa18.39■□□□□ 0.53
RETREG3-210ENST00000590541 SH3BP1Q9Y3L3 701 aa18.39■□□□□ 0.53
RETREG3-210ENST00000590541 R3HCC1Q9Y3T6 440 aaKnown RBP18.39■□□□□ 0.53
RETREG3-210ENST00000590541 NDUFS2O75306 463 aa18.38■□□□□ 0.53
RETREG3-210ENST00000590541 IDEP14735 1019 aa18.38■□□□□ 0.53
RETREG3-210ENST00000590541 GNSP15586 552 aa18.38■□□□□ 0.53
RETREG3-210ENST00000590541 YWHAQP27348 245 aa18.38■□□□□ 0.53
RETREG3-210ENST00000590541 GNL1P36915 607 aaPredicted RBP18.38■□□□□ 0.53
RETREG3-210ENST00000590541 SYCP2LQ5T4T6 812 aa18.38■□□□□ 0.53
RETREG3-210ENST00000590541 SYCP3Q8IZU3 236 aa18.38■□□□□ 0.53
RETREG3-210ENST00000590541 NUP93Q8N1F7 819 aa18.38■□□□□ 0.53
RETREG3-210ENST00000590541 IQUBQ8NA54 791 aa18.38■□□□□ 0.53
RETREG3-210ENST00000590541 PDZD8Q8NEN9 1154 aa18.38■□□□□ 0.53
RETREG3-210ENST00000590541 OVCA2Q8WZ82 227 aa18.38■□□□□ 0.53
RETREG3-210ENST00000590541 FOXJ1Q92949 421 aa18.38■□□□□ 0.53
RETREG3-210ENST00000590541 FBXO32Q969P5 355 aa18.38■□□□□ 0.53
RETREG3-210ENST00000590541 MRGPRX1Q96LB2 322 aa18.38■□□□□ 0.53
RETREG3-210ENST00000590541 PANK2Q9BZ23 570 aa18.38■□□□□ 0.53
RETREG3-210ENST00000590541 ZDHHC5Q9C0B5 715 aa18.38■□□□□ 0.53
RETREG3-210ENST00000590541 ELOVL4Q9GZR5 314 aa18.38■□□□□ 0.53
RETREG3-210ENST00000590541 CCSER2Q9H7U1 834 aa18.38■□□□□ 0.53
RETREG3-210ENST00000590541 MAGEF1Q9HAY2 307 aa18.38■□□□□ 0.53
RETREG3-210ENST00000590541 PANK4Q9NVE7 773 aa18.38■□□□□ 0.53
RETREG3-210ENST00000590541 KIAA1522Q9P206 1035 aaPredicted RBP18.38■□□□□ 0.53
RETREG3-210ENST00000590541 CHORDC1Q9UHD1 332 aaPredicted RBP18.38■□□□□ 0.53
RETREG3-210ENST00000590541 RAD54BQ9Y620 910 aa18.38■□□□□ 0.53
RETREG3-210ENST00000590541 A0A087X0B3 334 aa18.37■□□□□ 0.53
RETREG3-210ENST00000590541 PRRT4C9JH25 899 aa18.37■□□□□ 0.53
RETREG3-210ENST00000590541 CLDN5O00501 218 aa18.37■□□□□ 0.53
RETREG3-210ENST00000590541 ZBTB24O43167 697 aaPredicted RBP18.37■□□□□ 0.53
RETREG3-210ENST00000590541 TACC1O75410 805 aa18.37■□□□□ 0.53
RETREG3-210ENST00000590541 TNNC2P02585 160 aa18.37■□□□□ 0.53
RETREG3-210ENST00000590541 PTPN1P18031 435 aaKnown RBP18.37■□□□□ 0.53
RETREG3-210ENST00000590541 WDR45BQ5MNZ6 344 aa18.37■□□□□ 0.53
RETREG3-210ENST00000590541 HECTD3Q5T447 861 aa18.37■□□□□ 0.53
RETREG3-210ENST00000590541 SNX30Q5VWJ9 437 aa18.37■□□□□ 0.53
RETREG3-210ENST00000590541 GRAMD4Q6IC98 578 aa18.37■□□□□ 0.53
RETREG3-210ENST00000590541 SDE2Q6IQ49 451 aa18.37■□□□□ 0.53
RETREG3-210ENST00000590541 TMPRSS7Q7RTY8 843 aa18.37■□□□□ 0.53
RETREG3-210ENST00000590541 PDILTQ8N807 584 aa18.37■□□□□ 0.53
RETREG3-210ENST00000590541 OR6B3Q8NGW1 331 aa18.37■□□□□ 0.53
RETREG3-210ENST00000590541 B3GNT5Q9BYG0 378 aa18.37■□□□□ 0.53
RETREG3-210ENST00000590541 SNX25Q9H3E2 840 aa18.37■□□□□ 0.53
RETREG3-210ENST00000590541 IL21RQ9HBE5 538 aa18.37■□□□□ 0.53
RETREG3-210ENST00000590541 DNAJC17Q9NVM6 304 aaKnown RBP18.37■□□□□ 0.53
RETREG3-210ENST00000590541 KBTBD4Q9NVX7 518 aa18.37■□□□□ 0.53
RETREG3-210ENST00000590541 TOR4AQ9NXH8 423 aa18.37■□□□□ 0.53
RETREG3-210ENST00000590541 DKK4Q9UBT3 224 aa18.37■□□□□ 0.53
RETREG3-210ENST00000590541 KIAA0391O15091 583 aaKnown RBP18.36■□□□□ 0.53
RETREG3-210ENST00000590541 GREM1O60565 184 aa18.36■□□□□ 0.53
RETREG3-210ENST00000590541 RTN3O95197 1032 aaPredicted RBP18.36■□□□□ 0.53
RETREG3-210ENST00000590541 APC2O95996 2303 aa18.36■□□□□ 0.53
RETREG3-210ENST00000590541 CST3P01034 146 aaPredicted RBP18.36■□□□□ 0.53
RETREG3-210ENST00000590541 DUOXA2Q1HG44 320 aa18.36■□□□□ 0.53
RETREG3-210ENST00000590541 CNNM4Q6P4Q7 775 aa18.36■□□□□ 0.53
RETREG3-210ENST00000590541 CBWD2Q8IUF1 395 aa18.36■□□□□ 0.53
RETREG3-210ENST00000590541 SPRYD3Q8NCJ5 442 aa18.36■□□□□ 0.53
RETREG3-210ENST00000590541 SCAMP5Q8TAC9 235 aa18.36■□□□□ 0.53
RETREG3-210ENST00000590541 BAHD1Q8TBE0 780 aaPredicted RBP18.36■□□□□ 0.53
RETREG3-210ENST00000590541 DNASE2BQ8WZ79 361 aa18.36■□□□□ 0.53
RETREG3-210ENST00000590541 KCNK16Q96T55 309 aa18.36■□□□□ 0.53
RETREG3-210ENST00000590541 TRIM9Q9C026 710 aa18.36■□□□□ 0.53
RETREG3-210ENST00000590541 SETXQ7Z333 2677 aaKnown RBP18.36■□□□□ 0.53
RETREG3-210ENST00000590541 A0A1B0GTW7 788 aa18.35■□□□□ 0.53
RETREG3-210ENST00000590541 CACNG3O60359 315 aa18.35■□□□□ 0.53
RETREG3-210ENST00000590541 PRPF6O94906 941 aaKnown RBP18.35■□□□□ 0.53
RETREG3-210ENST00000590541 DKK1O94907 266 aa18.35■□□□□ 0.53
RETREG3-210ENST00000590541 FAM163BP0C2L3 166 aa18.35■□□□□ 0.53
RETREG3-210ENST00000590541 ZDHHC11BP0C7U3 371 aa18.35■□□□□ 0.53
RETREG3-210ENST00000590541 IRF1P10914 325 aa18.35■□□□□ 0.53
RETREG3-210ENST00000590541 CD6P30203 668 aa18.35■□□□□ 0.53
RETREG3-210ENST00000590541 TUBP50607 506 aa18.35■□□□□ 0.53
RETREG3-210ENST00000590541 E2F4Q16254 413 aa18.35■□□□□ 0.53
RETREG3-210ENST00000590541 TRAPPC11Q7Z392 1133 aa18.35■□□□□ 0.53
RETREG3-210ENST00000590541 MARCH9Q86YJ5 346 aa18.35■□□□□ 0.53
RETREG3-210ENST00000590541 WDR49Q8IV35 697 aa18.35■□□□□ 0.53
RETREG3-210ENST00000590541 SETD7Q8WTS6 366 aaKnown RBP18.35■□□□□ 0.53
RETREG3-210ENST00000590541 CACNA2D2Q9NY47 1150 aa18.35■□□□□ 0.53
RETREG3-210ENST00000590541 WSB2Q9NYS7 404 aaPredicted RBP18.35■□□□□ 0.53
RETREG3-210ENST00000590541 IL37Q9NZH6 218 aa18.35■□□□□ 0.53
RETREG3-210ENST00000590541 ACACAQ13085 2346 aa18.34■□□□□ 0.53
RETREG3-210ENST00000590541 ZNF233A6NK53 670 aa18.34■□□□□ 0.53
RETREG3-210ENST00000590541 EIF4E1BA6NMX2 242 aaKnown RBP18.34■□□□□ 0.53
RETREG3-210ENST00000590541 WASH3PC4AMC7 463 aa18.34■□□□□ 0.53
RETREG3-210ENST00000590541 NEDD8-MDP1E9PL57 170 aa18.34■□□□□ 0.53
RETREG3-210ENST00000590541 ZNF883P0CG24 379 aa18.34■□□□□ 0.53
RETREG3-210ENST00000590541 BNC1Q01954 994 aa18.34■□□□□ 0.53
RETREG3-210ENST00000590541 SURF1Q15526 300 aa18.34■□□□□ 0.53
RETREG3-210ENST00000590541 SHC4Q6S5L8 630 aa18.34■□□□□ 0.53
RETREG3-210ENST00000590541 KIAA1324Q6UXG2 1013 aaKnown RBP18.34■□□□□ 0.53
RETREG3-210ENST00000590541 HTR3DQ70Z44 454 aa18.34■□□□□ 0.53
RETREG3-210ENST00000590541 ZCCHC9Q8N567 271 aaKnown RBP18.34■□□□□ 0.53
RETREG3-210ENST00000590541 B3GALNT2Q8NCR0 500 aa18.34■□□□□ 0.53
RETREG3-210ENST00000590541 GLIS3Q8NEA6 775 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms