RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 MMRN2Q9H8L6 949 aa18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 BCCIPQ9P287 314 aaKnown RBP eCLIP18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 SCML2Q9UQR0 700 aa18.95■□□□□ 0.62
PRKCSH-211ENST00000590098 TULP3O75386 442 aa18.94■□□□□ 0.62
PRKCSH-211ENST00000590098 CD58P19256 250 aa18.94■□□□□ 0.62
PRKCSH-211ENST00000590098 PGFP49763 221 aa18.94■□□□□ 0.62
PRKCSH-211ENST00000590098 ADAM9Q13443 819 aa18.94■□□□□ 0.62
PRKCSH-211ENST00000590098 TRMT11Q7Z4G4 463 aaKnown RBP18.94■□□□□ 0.62
PRKCSH-211ENST00000590098 ETFBKMTQ8IXQ9 262 aa18.94■□□□□ 0.62
PRKCSH-211ENST00000590098 PGBD3Q8N328 593 aa18.94■□□□□ 0.62
PRKCSH-211ENST00000590098 GUF1Q8N442 669 aaKnown RBP18.94■□□□□ 0.62
PRKCSH-211ENST00000590098 KCNV2Q8TDN2 545 aa18.94■□□□□ 0.62
PRKCSH-211ENST00000590098 TAS1R2Q8TE23 839 aa18.94■□□□□ 0.62
PRKCSH-211ENST00000590098 WHAMMQ8TF30 809 aa18.94■□□□□ 0.62
PRKCSH-211ENST00000590098 CCDC34Q96HJ3 373 aa18.94■□□□□ 0.62
PRKCSH-211ENST00000590098 SPACA7Q96KW9 195 aa18.94■□□□□ 0.62
PRKCSH-211ENST00000590098 NIF3L1Q9GZT8 377 aa18.94■□□□□ 0.62
PRKCSH-211ENST00000590098 LSM7Q9UK45 103 aaKnown RBP18.94■□□□□ 0.62
PRKCSH-211ENST00000590098 ZDHHC9Q9Y397 364 aa18.94■□□□□ 0.62
PRKCSH-211ENST00000590098 PCDHA5Q9Y5H7 936 aa18.94■□□□□ 0.62
PRKCSH-211ENST00000590098 KHNYNO15037 678 aaKnown RBP18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 MAP3K13O43283 966 aa18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 TBX18O95935 607 aa18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 HNRNPLP14866 589 aaKnown RBP eCLIP18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 ACO1P21399 889 aaKnown RBP18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 BCKDHBP21953 392 aa18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 DHPSP49366 369 aaPredicted RBP18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 ENPEPQ07075 957 aa18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 PPP3CAQ08209 521 aa18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 KRBA2Q6ZNG9 492 aa18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 CLEC20AQ6ZU45 233 aa18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 HTR3DQ70Z44 454 aa18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 CYP2U1Q7Z449 544 aa18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 PHTF2Q8N3S3 785 aa18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 OLIG1Q8TAK6 271 aa18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 WBP2Q969T9 261 aa18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 TWNKQ96RR1 684 aa18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 EDEM2Q9BV94 578 aa18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 KLF16Q9BXK1 252 aaPredicted RBP18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 APOBEC3GQ9HC16 384 aaKnown RBP18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 PNPLA8Q9NP80 782 aa18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 CYLDQ9NQC7 956 aa18.93■□□□□ 0.62
PRKCSH-211ENST00000590098 A0A1W2PQ27 194 aa18.92■□□□□ 0.62
PRKCSH-211ENST00000590098 A0A1W2PQ64 194 aa18.92■□□□□ 0.62
PRKCSH-211ENST00000590098 A0A1W2PQD8 194 aa18.92■□□□□ 0.62
PRKCSH-211ENST00000590098 CYP26A1O43174 497 aa18.92■□□□□ 0.62
PRKCSH-211ENST00000590098 CHRM1P11229 460 aaPredicted RBP18.92■□□□□ 0.62
PRKCSH-211ENST00000590098 BYSLQ13895 437 aaKnown RBP18.92■□□□□ 0.62
PRKCSH-211ENST00000590098 C10orf76Q5T2E6 689 aa18.92■□□□□ 0.62
PRKCSH-211ENST00000590098 LPCAT2Q7L5N7 544 aa18.92■□□□□ 0.62
PRKCSH-211ENST00000590098 GPRIN1Q7Z2K8 1008 aa18.92■□□□□ 0.62
PRKCSH-211ENST00000590098 ZNF513Q8N8E2 541 aaPredicted RBP18.92■□□□□ 0.62
PRKCSH-211ENST00000590098 TERB1Q8NA31 727 aa18.92■□□□□ 0.62
PRKCSH-211ENST00000590098 HMGB4Q8WW32 186 aa18.92■□□□□ 0.62
PRKCSH-211ENST00000590098 RLN3Q8WXF3 142 aa18.92■□□□□ 0.62
PRKCSH-211ENST00000590098 XPO6Q96QU8 1125 aaKnown RBP18.92■□□□□ 0.62
PRKCSH-211ENST00000590098 LSM14BQ9BX40 385 aaKnown RBP18.92■□□□□ 0.62
PRKCSH-211ENST00000590098 TMEM8AQ9HCN3 771 aa18.92■□□□□ 0.62
PRKCSH-211ENST00000590098 ZDHHC4Q9NPG8 344 aa18.92■□□□□ 0.62
PRKCSH-211ENST00000590098 WDR35Q9P2L0 1181 aa18.92■□□□□ 0.62
PRKCSH-211ENST00000590098 MAP1BP46821 2468 aaKnown RBP18.91■□□□□ 0.62
PRKCSH-211ENST00000590098 GON4LQ3T8J9 2241 aa18.91■□□□□ 0.62
PRKCSH-211ENST00000590098 TCRBV21S2A2A0A5A6 115 aa18.91■□□□□ 0.62
PRKCSH-211ENST00000590098 HHLA1C9JL84 531 aa18.91■□□□□ 0.62
PRKCSH-211ENST00000590098 ADAM23O75077 832 aa18.91■□□□□ 0.62
PRKCSH-211ENST00000590098 CILPO75339 1184 aa18.91■□□□□ 0.62
PRKCSH-211ENST00000590098 KRT37O76014 449 aa18.91■□□□□ 0.62
PRKCSH-211ENST00000590098 ZNF202O95125 648 aa18.91■□□□□ 0.62
PRKCSH-211ENST00000590098 RARGP13631 454 aa18.91■□□□□ 0.62
PRKCSH-211ENST00000590098 GTF2H1P32780 548 aa18.91■□□□□ 0.62
PRKCSH-211ENST00000590098 P2RY2P41231 377 aa18.91■□□□□ 0.62
PRKCSH-211ENST00000590098 KRT39Q6A163 491 aa18.91■□□□□ 0.62
PRKCSH-211ENST00000590098 GRAMD4Q6IC98 578 aa18.91■□□□□ 0.62
PRKCSH-211ENST00000590098 TADA2BQ86TJ2 420 aa18.91■□□□□ 0.62
PRKCSH-211ENST00000590098 PIGKQ92643 395 aa18.91■□□□□ 0.62
PRKCSH-211ENST00000590098 BBS2Q9BXC9 721 aa18.91■□□□□ 0.62
PRKCSH-211ENST00000590098 DNAJC17Q9NVM6 304 aaKnown RBP18.91■□□□□ 0.62
PRKCSH-211ENST00000590098 OSER1Q9NX31 292 aa18.91■□□□□ 0.62
PRKCSH-211ENST00000590098 DNMT3LQ9UJW3 386 aa18.91■□□□□ 0.62
PRKCSH-211ENST00000590098 A0A1W2PQH9 124 aa18.9■□□□□ 0.62
PRKCSH-211ENST00000590098 LNP1A1A4G5 178 aa18.9■□□□□ 0.62
PRKCSH-211ENST00000590098 C4orf47A7E2U8 309 aa18.9■□□□□ 0.62
PRKCSH-211ENST00000590098 NEDD8-MDP1E9PL57 170 aa18.9■□□□□ 0.62
PRKCSH-211ENST00000590098 ZBTB24O43167 697 aaPredicted RBP18.9■□□□□ 0.62
PRKCSH-211ENST00000590098 PLA2G4AP47712 749 aa18.9■□□□□ 0.62
PRKCSH-211ENST00000590098 PSEN1P49768 467 aa18.9■□□□□ 0.62
PRKCSH-211ENST00000590098 C10orf120Q5SQS8 335 aa18.9■□□□□ 0.62
PRKCSH-211ENST00000590098 N4BP2L1Q5TBK1 243 aaPredicted RBP18.9■□□□□ 0.62
PRKCSH-211ENST00000590098 DAB2IPQ5VWQ8 1189 aa18.9■□□□□ 0.62
PRKCSH-211ENST00000590098 SDE2Q6IQ49 451 aa18.9■□□□□ 0.62
PRKCSH-211ENST00000590098 KLHDC10Q6PID8 442 aa18.9■□□□□ 0.62
PRKCSH-211ENST00000590098 TPGS1Q6ZTW0 290 aa18.9■□□□□ 0.62
PRKCSH-211ENST00000590098 TTC39CQ8N584 583 aa18.9■□□□□ 0.62
PRKCSH-211ENST00000590098 HEXIM2Q96MH2 286 aaKnown RBP18.9■□□□□ 0.62
PRKCSH-211ENST00000590098 DUSP16Q9BY84 665 aa18.9■□□□□ 0.62
PRKCSH-211ENST00000590098 GOLPH3LQ9H4A5 285 aa18.9■□□□□ 0.62
PRKCSH-211ENST00000590098 NMUR1Q9HB89 426 aa18.9■□□□□ 0.62
PRKCSH-211ENST00000590098 NAGPAQ9UK23 515 aa18.9■□□□□ 0.62
PRKCSH-211ENST00000590098 CEP295Q9C0D2 2601 aa18.9■□□□□ 0.62
PRKCSH-211ENST00000590098 PLXND1Q9Y4D7 1925 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms