RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 IPO4Q8TEX9 1081 aaKnown RBP22.34■■□□□ 1.17
ATG4D-212ENST00000590096 SLC20A1Q8WUM9 679 aa22.34■■□□□ 1.17
ATG4D-212ENST00000590096 BAP1Q92560 729 aa22.34■■□□□ 1.17
ATG4D-212ENST00000590096 IQCDQ96DY2 449 aa22.34■■□□□ 1.17
ATG4D-212ENST00000590096 C1QTNF1Q9BXJ1 281 aa22.34■■□□□ 1.17
ATG4D-212ENST00000590096 SYNCQ9H7C4 482 aa22.34■■□□□ 1.17
ATG4D-212ENST00000590096 ABCC13Q9NSE7 274 aa22.34■■□□□ 1.17
ATG4D-212ENST00000590096 NOCTQ9UK39 431 aaKnown RBP22.34■■□□□ 1.17
ATG4D-212ENST00000590096 NUDT5Q9UKK9 219 aa22.34■■□□□ 1.17
ATG4D-212ENST00000590096 CA14Q9ULX7 337 aa22.34■■□□□ 1.17
ATG4D-212ENST00000590096 TMEM221A6NGB7 291 aa22.33■■□□□ 1.17
ATG4D-212ENST00000590096 LRRC53A6NM62 1247 aa22.33■■□□□ 1.17
ATG4D-212ENST00000590096 M0R296 226 aa22.33■■□□□ 1.17
ATG4D-212ENST00000590096 CDR2Q01850 454 aa22.33■■□□□ 1.17
ATG4D-212ENST00000590096 BSPRYQ5W0U4 402 aa22.33■■□□□ 1.17
ATG4D-212ENST00000590096 MSANTD4Q8NCY6 345 aa22.33■■□□□ 1.17
ATG4D-212ENST00000590096 CLEC4CQ8WTT0 213 aa22.33■■□□□ 1.17
ATG4D-212ENST00000590096 RNF139Q8WU17 664 aa22.33■■□□□ 1.17
ATG4D-212ENST00000590096 ZFYVE19Q96K21 471 aa22.33■■□□□ 1.17
ATG4D-212ENST00000590096 CPXM1Q96SM3 734 aa22.33■■□□□ 1.17
ATG4D-212ENST00000590096 TTYH3Q9C0H2 523 aa22.33■■□□□ 1.17
ATG4D-212ENST00000590096 OLA1Q9NTK5 396 aaKnown RBP22.33■■□□□ 1.17
ATG4D-212ENST00000590096 CFAP97Q9P2B7 532 aa22.33■■□□□ 1.17
ATG4D-212ENST00000590096 RASAL2Q9UJF2 1139 aa22.33■■□□□ 1.17
ATG4D-212ENST00000590096 LTFP02788 710 aa22.32■■□□□ 1.16
ATG4D-212ENST00000590096 CDH5P33151 784 aaPredicted RBP22.32■■□□□ 1.16
ATG4D-212ENST00000590096 IFNAR2P48551 515 aa22.32■■□□□ 1.16
ATG4D-212ENST00000590096 ZXDBP98169 803 aa22.32■■□□□ 1.16
ATG4D-212ENST00000590096 EFEMP1Q12805 493 aa22.32■■□□□ 1.16
ATG4D-212ENST00000590096 SFMBT2Q5VUG0 894 aa22.32■■□□□ 1.16
ATG4D-212ENST00000590096 SIX5Q8N196 739 aa22.32■■□□□ 1.16
ATG4D-212ENST00000590096 ZNF397Q8NF99 534 aaPredicted RBP22.32■■□□□ 1.16
ATG4D-212ENST00000590096 RIN3Q8TB24 985 aa22.32■■□□□ 1.16
ATG4D-212ENST00000590096 FAM149B1Q96BN6 582 aa22.32■■□□□ 1.16
ATG4D-212ENST00000590096 TRPV5Q9NQA5 729 aa22.32■■□□□ 1.16
ATG4D-212ENST00000590096 ARHGEF3Q9NR81 526 aa22.32■■□□□ 1.16
ATG4D-212ENST00000590096 GKN1Q9NS71 199 aa22.32■■□□□ 1.16
ATG4D-212ENST00000590096 DUS2Q9NX74 493 aaKnown RBP22.32■■□□□ 1.16
ATG4D-212ENST00000590096 STRIP2Q9ULQ0 834 aa22.32■■□□□ 1.16
ATG4D-212ENST00000590096 SH3BP1Q9Y3L3 701 aa22.32■■□□□ 1.16
ATG4D-212ENST00000590096 KIF26AQ9ULI4 1882 aaPredicted RBP22.32■■□□□ 1.16
ATG4D-212ENST00000590096 TECTAO75443 2155 aa22.32■■□□□ 1.16
ATG4D-212ENST00000590096 MDM4O15151 490 aa22.31■■□□□ 1.16
ATG4D-212ENST00000590096 PAPSS1O43252 624 aaPredicted RBP22.31■■□□□ 1.16
ATG4D-212ENST00000590096 IRF1P10914 325 aa22.31■■□□□ 1.16
ATG4D-212ENST00000590096 FMO1Q01740 532 aa22.31■■□□□ 1.16
ATG4D-212ENST00000590096 PDGFRLQ15198 375 aa22.31■■□□□ 1.16
ATG4D-212ENST00000590096 ASIC2Q16515 512 aa22.31■■□□□ 1.16
ATG4D-212ENST00000590096 SLC44A4Q53GD3 710 aa22.31■■□□□ 1.16
ATG4D-212ENST00000590096 TRIM72Q6ZMU5 477 aa22.31■■□□□ 1.16
ATG4D-212ENST00000590096 HFE2Q6ZVN8 426 aa22.31■■□□□ 1.16
ATG4D-212ENST00000590096 MIB1Q86YT6 1006 aa22.31■■□□□ 1.16
ATG4D-212ENST00000590096 KIAA1958Q8N8K9 716 aa22.31■■□□□ 1.16
ATG4D-212ENST00000590096 OSCP1Q8WVF1 389 aa22.31■■□□□ 1.16
ATG4D-212ENST00000590096 EDEM1Q92611 657 aa22.31■■□□□ 1.16
ATG4D-212ENST00000590096 ASIC4Q96FT7 647 aa22.31■■□□□ 1.16
ATG4D-212ENST00000590096 ZFRQ96KR1 1074 aaKnown RBP22.31■■□□□ 1.16
ATG4D-212ENST00000590096 TRIM62Q9BVG3 475 aa22.31■■□□□ 1.16
ATG4D-212ENST00000590096 MFSD1Q9H3U5 465 aa22.31■■□□□ 1.16
ATG4D-212ENST00000590096 SEPT11Q9NVA2 429 aaKnown RBP22.31■■□□□ 1.16
ATG4D-212ENST00000590096 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.31■■□□□ 1.16
ATG4D-212ENST00000590096 TICRRQ7Z2Z1 1910 aa22.31■■□□□ 1.16
ATG4D-212ENST00000590096 ITIH6Q6UXX5 1313 aa22.31■■□□□ 1.16
ATG4D-212ENST00000590096 A0A1W2PQJ5 194 aa22.3■■□□□ 1.16
ATG4D-212ENST00000590096 FAM86C2PA6NEL3 165 aa22.3■■□□□ 1.16
ATG4D-212ENST00000590096 ARNTLO00327 626 aa22.3■■□□□ 1.16
ATG4D-212ENST00000590096 SLC9A3R1O14745 358 aaPredicted RBP22.3■■□□□ 1.16
ATG4D-212ENST00000590096 CHRNB2P17787 502 aa22.3■■□□□ 1.16
ATG4D-212ENST00000590096 NOMO3P69849 1222 aa22.3■■□□□ 1.16
ATG4D-212ENST00000590096 MLF2Q15773 248 aaPredicted RBP22.3■■□□□ 1.16
ATG4D-212ENST00000590096 PTPN20Q4JDL3 420 aa22.3■■□□□ 1.16
ATG4D-212ENST00000590096 NAA35Q5VZE5 725 aa22.3■■□□□ 1.16
ATG4D-212ENST00000590096 OR6B2Q6IFH4 312 aa22.3■■□□□ 1.16
ATG4D-212ENST00000590096 ERICH1Q86X53 443 aa22.3■■□□□ 1.16
ATG4D-212ENST00000590096 SHDQ96IW2 340 aa22.3■■□□□ 1.16
ATG4D-212ENST00000590096 FAM83CQ9BQN1 747 aa22.3■■□□□ 1.16
ATG4D-212ENST00000590096 KLF16Q9BXK1 252 aaPredicted RBP22.3■■□□□ 1.16
ATG4D-212ENST00000590096 NUCKS1Q9H1E3 243 aaKnown RBP22.3■■□□□ 1.16
ATG4D-212ENST00000590096 RBSNQ9H1K0 784 aa22.3■■□□□ 1.16
ATG4D-212ENST00000590096 HEBP1Q9NRV9 189 aa22.3■■□□□ 1.16
ATG4D-212ENST00000590096 MARCH2Q9P0N8 246 aa22.3■■□□□ 1.16
ATG4D-212ENST00000590096 TJP2Q9UDY2 1190 aa22.3■■□□□ 1.16
ATG4D-212ENST00000590096 LSM7Q9UK45 103 aaKnown RBP22.3■■□□□ 1.16
ATG4D-212ENST00000590096 E2F8A0AVK6 867 aa22.29■■□□□ 1.16
ATG4D-212ENST00000590096 ERBB2P04626 1255 aa22.29■■□□□ 1.16
ATG4D-212ENST00000590096 KPNA1P52294 538 aaPredicted RBP22.29■■□□□ 1.16
ATG4D-212ENST00000590096 COG7P83436 770 aa22.29■■□□□ 1.16
ATG4D-212ENST00000590096 PRKCQQ04759 706 aa22.29■■□□□ 1.16
ATG4D-212ENST00000590096 TMEM31Q5JXX7 168 aa22.29■■□□□ 1.16
ATG4D-212ENST00000590096 TRIM68Q6AZZ1 485 aa22.29■■□□□ 1.16
ATG4D-212ENST00000590096 TOGARAM2Q6ZUX3 1019 aa22.29■■□□□ 1.16
ATG4D-212ENST00000590096 CPLX3Q8WVH0 158 aa22.29■■□□□ 1.16
ATG4D-212ENST00000590096 CPA5Q8WXQ8 436 aa22.29■■□□□ 1.16
ATG4D-212ENST00000590096 AGPAT1Q99943 283 aa22.29■■□□□ 1.16
ATG4D-212ENST00000590096 EBF3Q9H4W6 596 aa22.29■■□□□ 1.16
ATG4D-212ENST00000590096 AIPL1Q9NZN9 384 aa22.29■■□□□ 1.16
ATG4D-212ENST00000590096 TBC1D14Q9P2M4 693 aa22.29■■□□□ 1.16
ATG4D-212ENST00000590096 WNT6Q9Y6F9 365 aa22.29■■□□□ 1.16
ATG4D-212ENST00000590096 KRBA1A5PL33 1030 aa22.28■■□□□ 1.16
ATG4D-212ENST00000590096 CAPN9O14815 690 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms