RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 LIMK1P53667 647 aa19.01■□□□□ 0.63
H3F3B-209ENST00000589949 GAD2Q05329 585 aa19.01■□□□□ 0.63
H3F3B-209ENST00000589949 ENPEPQ07075 957 aa19.01■□□□□ 0.63
H3F3B-209ENST00000589949 ZNF394Q53GI3 561 aa19.01■□□□□ 0.63
H3F3B-209ENST00000589949 PPP1R26Q5T8A7 1209 aaPredicted RBP19.01■□□□□ 0.63
H3F3B-209ENST00000589949 PMS2CLQ68D20 193 aa19.01■□□□□ 0.63
H3F3B-209ENST00000589949 HTR3DQ70Z44 454 aa19.01■□□□□ 0.63
H3F3B-209ENST00000589949 MIB1Q86YT6 1006 aa19.01■□□□□ 0.63
H3F3B-209ENST00000589949 C12orf50Q8NA57 414 aaPredicted RBP19.01■□□□□ 0.63
H3F3B-209ENST00000589949 OLIG1Q8TAK6 271 aa19.01■□□□□ 0.63
H3F3B-209ENST00000589949 RLN3Q8WXF3 142 aa19.01■□□□□ 0.63
H3F3B-209ENST00000589949 CCDC47Q96A33 483 aaKnown RBP19.01■□□□□ 0.63
H3F3B-209ENST00000589949 CNTNAP3BQ96NU0 1288 aa19.01■□□□□ 0.63
H3F3B-209ENST00000589949 CNTNAP3Q9BZ76 1288 aa19.01■□□□□ 0.63
H3F3B-209ENST00000589949 TMEM8AQ9HCN3 771 aa19.01■□□□□ 0.63
H3F3B-209ENST00000589949 TLR8Q9NR97 1041 aaKnown RBP19.01■□□□□ 0.63
H3F3B-209ENST00000589949 ADRB1P08588 477 aa19■□□□□ 0.63
H3F3B-209ENST00000589949 RPL13P26373 211 aaKnown RBP19■□□□□ 0.63
H3F3B-209ENST00000589949 GBP1P32455 592 aa19■□□□□ 0.63
H3F3B-209ENST00000589949 PRCPP42785 496 aa19■□□□□ 0.63
H3F3B-209ENST00000589949 TNFRSF4P43489 277 aa19■□□□□ 0.63
H3F3B-209ENST00000589949 KIF11P52732 1056 aa19■□□□□ 0.63
H3F3B-209ENST00000589949 PMS1P54277 932 aaKnown RBP19■□□□□ 0.63
H3F3B-209ENST00000589949 CREB5Q02930 508 aa19■□□□□ 0.63
H3F3B-209ENST00000589949 EDRF1Q3B7T1 1238 aa19■□□□□ 0.63
H3F3B-209ENST00000589949 USP39Q53GS9 565 aaKnown RBP19■□□□□ 0.63
H3F3B-209ENST00000589949 STPG1Q5TH74 334 aa19■□□□□ 0.63
H3F3B-209ENST00000589949 TTC30AQ86WT1 665 aa19■□□□□ 0.63
H3F3B-209ENST00000589949 FMR1NBQ8N0W7 255 aaPredicted RBP19■□□□□ 0.63
H3F3B-209ENST00000589949 CCDC26Q8TAB7 109 aa19■□□□□ 0.63
H3F3B-209ENST00000589949 ERCC4Q92889 916 aaPredicted RBP19■□□□□ 0.63
H3F3B-209ENST00000589949 TATDN2Q93075 761 aa19■□□□□ 0.63
H3F3B-209ENST00000589949 NACA2Q9H009 215 aa19■□□□□ 0.63
H3F3B-209ENST00000589949 VPS45Q9NRW7 570 aa19■□□□□ 0.63
H3F3B-209ENST00000589949 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19■□□□□ 0.63
H3F3B-209ENST00000589949 FOXD2O60548 495 aaPredicted RBP18.99■□□□□ 0.63
H3F3B-209ENST00000589949 ELF2Q15723 593 aa18.99■□□□□ 0.63
H3F3B-209ENST00000589949 ANO4Q32M45 955 aa18.99■□□□□ 0.63
H3F3B-209ENST00000589949 KRT39Q6A163 491 aa18.99■□□□□ 0.63
H3F3B-209ENST00000589949 SLC4A11Q8NBS3 891 aa18.99■□□□□ 0.63
H3F3B-209ENST00000589949 IMPG2Q9BZV3 1241 aa18.99■□□□□ 0.63
H3F3B-209ENST00000589949 MBD1Q9UIS9 605 aaPredicted RBP18.99■□□□□ 0.63
H3F3B-209ENST00000589949 USP3Q9Y6I4 520 aa18.99■□□□□ 0.63
H3F3B-209ENST00000589949 MYO18AQ92614 2054 aaKnown RBP18.99■□□□□ 0.63
H3F3B-209ENST00000589949 TBC1D3BA6NDS4 549 aa18.98■□□□□ 0.63
H3F3B-209ENST00000589949 PATE3B3GLJ2 98 aa18.98■□□□□ 0.63
H3F3B-209ENST00000589949 RHOBTB1O94844 696 aa18.98■□□□□ 0.63
H3F3B-209ENST00000589949 CAVIN2O95810 425 aa18.98■□□□□ 0.63
H3F3B-209ENST00000589949 KLKB1P03952 638 aa18.98■□□□□ 0.63
H3F3B-209ENST00000589949 RARGP13631 454 aa18.98■□□□□ 0.63
H3F3B-209ENST00000589949 GTF2H1P32780 548 aa18.98■□□□□ 0.63
H3F3B-209ENST00000589949 ATP5C1P36542 298 aaKnown RBP18.98■□□□□ 0.63
H3F3B-209ENST00000589949 P2RY2P41231 377 aa18.98■□□□□ 0.63
H3F3B-209ENST00000589949 RAD23BP54727 409 aa18.98■□□□□ 0.63
H3F3B-209ENST00000589949 CBWD6Q4V339 395 aa18.98■□□□□ 0.63
H3F3B-209ENST00000589949 CBWD3Q5JTY5 395 aa18.98■□□□□ 0.63
H3F3B-209ENST00000589949 CBWD5Q5RIA9 395 aa18.98■□□□□ 0.63
H3F3B-209ENST00000589949 Q6ZNB5 142 aa18.98■□□□□ 0.63
H3F3B-209ENST00000589949 ENGASEQ8NFI3 743 aa18.98■□□□□ 0.63
H3F3B-209ENST00000589949 ACOX2Q99424 681 aa18.98■□□□□ 0.63
H3F3B-209ENST00000589949 DUSP16Q9BY84 665 aa18.98■□□□□ 0.63
H3F3B-209ENST00000589949 PNPLA8Q9NP80 782 aa18.98■□□□□ 0.63
H3F3B-209ENST00000589949 DEC1Q9P2X7 70 aa18.98■□□□□ 0.63
H3F3B-209ENST00000589949 PCDHA5Q9Y5H7 936 aa18.98■□□□□ 0.63
H3F3B-209ENST00000589949 ATP6V1DQ9Y5K8 247 aa18.98■□□□□ 0.63
H3F3B-209ENST00000589949 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.97■□□□□ 0.63
H3F3B-209ENST00000589949 PRRT4C9JH25 899 aa18.97■□□□□ 0.63
H3F3B-209ENST00000589949 WASP42768 502 aa18.97■□□□□ 0.63
H3F3B-209ENST00000589949 MAP7D1Q3KQU3 841 aa18.97■□□□□ 0.63
H3F3B-209ENST00000589949 HSF5Q4G112 596 aaPredicted RBP18.97■□□□□ 0.63
H3F3B-209ENST00000589949 C10orf76Q5T2E6 689 aa18.97■□□□□ 0.63
H3F3B-209ENST00000589949 TPGS1Q6ZTW0 290 aa18.97■□□□□ 0.63
H3F3B-209ENST00000589949 TOGARAM2Q6ZUX3 1019 aa18.97■□□□□ 0.63
H3F3B-209ENST00000589949 ZC3H3Q8IXZ2 948 aaKnown RBP18.97■□□□□ 0.63
H3F3B-209ENST00000589949 TERB1Q8NA31 727 aa18.97■□□□□ 0.63
H3F3B-209ENST00000589949 HMGB4Q8WW32 186 aa18.97■□□□□ 0.63
H3F3B-209ENST00000589949 HEXIM2Q96MH2 286 aaKnown RBP18.97■□□□□ 0.63
H3F3B-209ENST00000589949 CD248Q9HCU0 757 aa18.97■□□□□ 0.63
H3F3B-209ENST00000589949 CISHQ9NSE2 258 aa18.97■□□□□ 0.63
H3F3B-209ENST00000589949 RAB20Q9NX57 234 aa18.97■□□□□ 0.63
H3F3B-209ENST00000589949 THADAQ6YHU6 1953 aa18.97■□□□□ 0.63
H3F3B-209ENST00000589949 CNOT1A5YKK6 2376 aaKnown RBP18.97■□□□□ 0.63
H3F3B-209ENST00000589949 NUP205Q92621 2012 aa18.96■□□□□ 0.63
H3F3B-209ENST00000589949 TCRBV21S2A2A0A5A6 115 aa18.96■□□□□ 0.63
H3F3B-209ENST00000589949 LNP1A1A4G5 178 aa18.96■□□□□ 0.63
H3F3B-209ENST00000589949 NEDD8-MDP1E9PL57 170 aa18.96■□□□□ 0.63
H3F3B-209ENST00000589949 CACNG3O60359 315 aa18.96■□□□□ 0.63
H3F3B-209ENST00000589949 STC2O76061 302 aa18.96■□□□□ 0.63
H3F3B-209ENST00000589949 TYRP14679 529 aa18.96■□□□□ 0.63
H3F3B-209ENST00000589949 MXI1P50539 228 aa18.96■□□□□ 0.63
H3F3B-209ENST00000589949 EOGTQ5NDL2 527 aa18.96■□□□□ 0.63
H3F3B-209ENST00000589949 C10orf120Q5SQS8 335 aa18.96■□□□□ 0.63
H3F3B-209ENST00000589949 BTBD8Q5XKL5 378 aa18.96■□□□□ 0.63
H3F3B-209ENST00000589949 EGFLAMQ63HQ2 1017 aa18.96■□□□□ 0.63
H3F3B-209ENST00000589949 ANKRD40Q6AI12 368 aa18.96■□□□□ 0.63
H3F3B-209ENST00000589949 IL31Q6EBC2 164 aa18.96■□□□□ 0.63
H3F3B-209ENST00000589949 KLHDC10Q6PID8 442 aa18.96■□□□□ 0.63
H3F3B-209ENST00000589949 CCDC186Q7Z3E2 898 aa18.96■□□□□ 0.63
H3F3B-209ENST00000589949 ZNF513Q8N8E2 541 aaPredicted RBP18.96■□□□□ 0.63
H3F3B-209ENST00000589949 FBXL13Q8NEE6 735 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms