RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 TXNDC8Q6A555 127 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 PTCRAQ6ISU1 281 aaPredicted RBP14.27□□□□□ -0.13
VMP1-210ENST00000589823 RAD9BQ6WBX8 426 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 HFE2Q6ZVN8 426 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 C3orf20Q8ND61 904 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.27□□□□□ -0.13
VMP1-210ENST00000589823 CTNNBL1Q8WYA6 563 aaPredicted RBP14.27□□□□□ -0.13
VMP1-210ENST00000589823 PPP1R9BQ96SB3 815 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 NACA2Q9H009 215 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 TASP1Q9H6P5 420 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 NMUR1Q9HB89 426 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 POPDC2Q9HBU9 364 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 PRDM6Q9NQX0 595 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 METTL5Q9NRN9 209 aaKnown RBP14.27□□□□□ -0.13
VMP1-210ENST00000589823 OLA1Q9NTK5 396 aaKnown RBP14.27□□□□□ -0.13
VMP1-210ENST00000589823 PARVAQ9NVD7 372 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.27□□□□□ -0.13
VMP1-210ENST00000589823 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.27□□□□□ -0.13
VMP1-210ENST00000589823 THEGQ9P2T0 379 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 CNOT8Q9UFF9 292 aaKnown RBP14.27□□□□□ -0.13
VMP1-210ENST00000589823 NENFQ9UMX5 172 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 SCINQ9Y6U3 715 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 SPTBN5Q9NRC6 3674 aaKnown RBP14.27□□□□□ -0.13
VMP1-210ENST00000589823 C2orf16Q68DN1 1984 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 MYO16Q9Y6X6 1858 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 TRAV19A0A0A6YYK7 116 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 ARHGAP6O43182 974 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 GRAP2O75791 330 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 LCA5LO95447 670 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 KRT3P12035 628 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 NCAM1P13591 858 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 RRM1P23921 792 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 GBP2P32456 591 aaPredicted RBP14.26□□□□□ -0.13
VMP1-210ENST00000589823 ATP5C1P36542 298 aaKnown RBP14.26□□□□□ -0.13
VMP1-210ENST00000589823 AVPR1AP37288 418 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 MAGEA1P43355 309 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 PGFP49763 221 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 GALCP54803 685 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 KRT83P78385 493 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 TAF5Q15542 800 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 C10orf120Q5SQS8 335 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 BEND5Q7L4P6 421 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 MAB21L3Q8N8X9 362 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 EDEM1Q92611 657 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 FGF13Q92913 245 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 ACSF2Q96CM8 615 aaPredicted RBP14.26□□□□□ -0.13
VMP1-210ENST00000589823 PIWIL1Q96J94 861 aaKnown RBP14.26□□□□□ -0.13
VMP1-210ENST00000589823 THAP2Q9H0W7 228 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 CCSER2Q9H7U1 834 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 MRPL47Q9HD33 250 aaKnown RBP14.26□□□□□ -0.13
VMP1-210ENST00000589823 OSER1Q9NX31 292 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 GDE1Q9NZC3 331 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 MYO1AQ9UBC5 1043 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 CDH7Q9ULB5 785 aa14.26□□□□□ -0.13
VMP1-210ENST00000589823 ZNF638Q14966 1978 aaKnown RBP14.25□□□□□ -0.13
VMP1-210ENST00000589823 C2orf78A6NCI8 922 aa14.25□□□□□ -0.13
VMP1-210ENST00000589823 NRG2O14511 850 aaPredicted RBP14.25□□□□□ -0.13
VMP1-210ENST00000589823 ZNF263O14978 683 aa14.25□□□□□ -0.13
VMP1-210ENST00000589823 ATMINO43313 823 aaPredicted RBP14.25□□□□□ -0.13
VMP1-210ENST00000589823 DAB1O75553 588 aa14.25□□□□□ -0.13
VMP1-210ENST00000589823 OAS1P00973 400 aaKnown RBP14.25□□□□□ -0.13
VMP1-210ENST00000589823 CKMP06732 381 aa14.25□□□□□ -0.13
VMP1-210ENST00000589823 TMEM253P0C7T8 217 aa14.25□□□□□ -0.13
VMP1-210ENST00000589823 HDCP19113 662 aa14.25□□□□□ -0.13
VMP1-210ENST00000589823 TFF2Q03403 129 aa14.25□□□□□ -0.13
VMP1-210ENST00000589823 SMAD2Q15796 467 aaKnown RBP14.25□□□□□ -0.13
VMP1-210ENST00000589823 STXBP5Q5T5C0 1151 aa14.25□□□□□ -0.13
VMP1-210ENST00000589823 DCUN1D2Q6PH85 259 aa14.25□□□□□ -0.13
VMP1-210ENST00000589823 OTOP3Q7RTS5 596 aa14.25□□□□□ -0.13
VMP1-210ENST00000589823 NPAS3Q8IXF0 933 aa14.25□□□□□ -0.13
VMP1-210ENST00000589823 TXLNBQ8N3L3 684 aa14.25□□□□□ -0.13
VMP1-210ENST00000589823 ZNF276Q8N554 614 aa14.25□□□□□ -0.13
VMP1-210ENST00000589823 ARL14EPQ8N8R7 260 aaPredicted RBP14.25□□□□□ -0.13
VMP1-210ENST00000589823 SLC2A13Q96QE2 648 aa14.25□□□□□ -0.13
VMP1-210ENST00000589823 PHF7Q9BWX1 381 aaPredicted RBP14.25□□□□□ -0.13
VMP1-210ENST00000589823 SLC46A2Q9BY10 475 aa14.25□□□□□ -0.13
VMP1-210ENST00000589823 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.25□□□□□ -0.13
VMP1-210ENST00000589823 INTUQ9ULD6 942 aa14.25□□□□□ -0.13
VMP1-210ENST00000589823 PCDHA13Q9Y5I0 950 aa14.25□□□□□ -0.13
VMP1-210ENST00000589823 ZFP37Q9Y6Q3 630 aaPredicted RBP14.25□□□□□ -0.13
VMP1-210ENST00000589823 BRWD1Q9NSI6 2320 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 SIGLEC16A6NMB1 481 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 COCHO43405 550 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 CYP1A2P05177 515 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 MBL2P11226 248 aaPredicted RBP14.24□□□□□ -0.13
VMP1-210ENST00000589823 DESP17661 470 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 NOS2P35228 1153 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 MATKP42679 507 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 CCZ1BP86790 482 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 CCZ1P86791 482 aaPredicted RBP14.24□□□□□ -0.13
VMP1-210ENST00000589823 DCAF6Q58WW2 860 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 PLEKHA7Q6IQ23 1121 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 KLHDC10Q6PID8 442 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 ARCQ7LC44 396 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 CMTM8Q8IZV2 173 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 DEFB106AQ8N104 65 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 TDRD5Q8NAT2 981 aaKnown RBP14.24□□□□□ -0.13
VMP1-210ENST00000589823 KHSRPQ92945 711 aaKnown RBP eCLIP14.24□□□□□ -0.13
VMP1-210ENST00000589823 MCEEQ96PE7 176 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 MYADMQ96S97 322 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms