RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 OLA1Q9NTK5 396 aaKnown RBP12.75□□□□□ -0.37
DNMT1-218ENST00000589294 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.75□□□□□ -0.37
DNMT1-218ENST00000589294 RRN3Q9NYV6 651 aa12.75□□□□□ -0.37
DNMT1-218ENST00000589294 TMEM59LQ9UK28 342 aa12.75□□□□□ -0.37
DNMT1-218ENST00000589294 USP15Q9Y4E8 981 aaPredicted RBP12.75□□□□□ -0.37
DNMT1-218ENST00000589294 PCDHA13Q9Y5I0 950 aa12.75□□□□□ -0.37
DNMT1-218ENST00000589294 TCRBV5S1A1TA0A578 114 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 GRXCR2A6NFK2 248 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 GOLGA8SH3BPF8 625 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 CAPN9O14815 690 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 MBTPS2O43462 519 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 TLR5O60602 858 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 TADA3O75528 432 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 OAS1P00973 400 aaKnown RBP12.74□□□□□ -0.37
DNMT1-218ENST00000589294 CYP1A2P05177 515 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 FYNP06241 537 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 TMEM253P0C7T8 217 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 HDCP19113 662 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 ATP5C1P36542 298 aaKnown RBP12.74□□□□□ -0.37
DNMT1-218ENST00000589294 MATKP42679 507 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 PGFP49763 221 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 CCZ1BP86790 482 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 CCZ1P86791 482 aaPredicted RBP12.74□□□□□ -0.37
DNMT1-218ENST00000589294 MAMLD1Q13495 774 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 MTF1Q14872 753 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 TAF5Q15542 800 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 AAK1Q2M2I8 961 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 PPP1R15BQ5SWA1 713 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 FAM102AQ5T9C2 384 aaPredicted RBP12.74□□□□□ -0.37
DNMT1-218ENST00000589294 DNAJC24Q6P3W2 148 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.74□□□□□ -0.37
DNMT1-218ENST00000589294 RNF139Q8WU17 664 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 FAM149B1Q96BN6 582 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 SLC2A13Q96QE2 648 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 SELENOOQ9BVL4 669 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 SLC46A2Q9BY10 475 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 THAP2Q9H0W7 228 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 OSER1Q9NX31 292 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 CNOT8Q9UFF9 292 aaKnown RBP12.74□□□□□ -0.37
DNMT1-218ENST00000589294 USTQ9Y2C2 406 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 SCINQ9Y6U3 715 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 PATJQ8NI35 1801 aa12.74□□□□□ -0.37
DNMT1-218ENST00000589294 XIRP2A4UGR9 3374 aa12.73□□□□□ -0.37
DNMT1-218ENST00000589294 TRAV19A0A0A6YYK7 116 aa12.73□□□□□ -0.37
DNMT1-218ENST00000589294 NCAM1P13591 858 aa12.73□□□□□ -0.37
DNMT1-218ENST00000589294 GJA1P17302 382 aa12.73□□□□□ -0.37
DNMT1-218ENST00000589294 ABCB4P21439 1286 aa12.73□□□□□ -0.37
DNMT1-218ENST00000589294 NOS2P35228 1153 aa12.73□□□□□ -0.37
DNMT1-218ENST00000589294 RNASE9P60153 205 aaKnown RBP12.73□□□□□ -0.37
DNMT1-218ENST00000589294 TCEAL1Q15170 157 aa12.73□□□□□ -0.37
DNMT1-218ENST00000589294 TEAD2Q15562 447 aa12.73□□□□□ -0.37
DNMT1-218ENST00000589294 SMAD2Q15796 467 aaKnown RBP12.73□□□□□ -0.37
DNMT1-218ENST00000589294 GPR158Q5T848 1215 aa12.73□□□□□ -0.37
DNMT1-218ENST00000589294 TXNDC8Q6A555 127 aa12.73□□□□□ -0.37
DNMT1-218ENST00000589294 HFE2Q6ZVN8 426 aa12.73□□□□□ -0.37
DNMT1-218ENST00000589294 RSRC2Q7L4I2 434 aaKnown RBP12.73□□□□□ -0.37
DNMT1-218ENST00000589294 OTOP3Q7RTS5 596 aa12.73□□□□□ -0.37
DNMT1-218ENST00000589294 DNAAF5Q86Y56 855 aa12.73□□□□□ -0.37
DNMT1-218ENST00000589294 FGF13Q92913 245 aa12.73□□□□□ -0.37
DNMT1-218ENST00000589294 ZNF653Q96CK0 615 aa12.73□□□□□ -0.37
DNMT1-218ENST00000589294 DDX23Q9BUQ8 820 aaKnown RBP12.73□□□□□ -0.37
DNMT1-218ENST00000589294 POMKQ9H5K3 350 aa12.73□□□□□ -0.37
DNMT1-218ENST00000589294 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.73□□□□□ -0.37
DNMT1-218ENST00000589294 UVRAGQ9P2Y5 699 aa12.73□□□□□ -0.37
DNMT1-218ENST00000589294 DNMT3LQ9UJW3 386 aa12.73□□□□□ -0.37
DNMT1-218ENST00000589294 CDH7Q9ULB5 785 aa12.73□□□□□ -0.37
DNMT1-218ENST00000589294 NOTCH4Q99466 2003 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 ZNF638Q14966 1978 aaKnown RBP12.72□□□□□ -0.37
DNMT1-218ENST00000589294 FAM170AA1A519 330 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 C2orf78A6NCI8 922 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 TMEM191CA6NGB0 347 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 COCHO43405 550 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 DAB1O75553 588 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 OLFM2O95897 454 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 CEBPBP17676 345 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 RFC1P35251 1148 aaPredicted RBP12.72□□□□□ -0.37
DNMT1-218ENST00000589294 AVPR1AP37288 418 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 KPNA1P52294 538 aaPredicted RBP12.72□□□□□ -0.37
DNMT1-218ENST00000589294 SLC7A9P82251 487 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 CYP4F8P98187 520 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 SLC25A52Q3SY17 297 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 DCAF6Q58WW2 860 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 C10orf120Q5SQS8 335 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 PTCRAQ6ISU1 281 aaPredicted RBP12.72□□□□□ -0.37
DNMT1-218ENST00000589294 MSANTD2Q6P1R3 559 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 DCUN1D2Q6PH85 259 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 PHLDB2Q86SQ0 1253 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 NPAS3Q8IXF0 933 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 RHOT2Q8IXI1 618 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 CMTM8Q8IZV2 173 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 DEFB106AQ8N104 65 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 MAB21L3Q8N8X9 362 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 EDEM1Q92611 657 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 NT5C3BQ969T7 300 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 ACSF2Q96CM8 615 aaPredicted RBP12.72□□□□□ -0.37
DNMT1-218ENST00000589294 PIWIL1Q96J94 861 aaKnown RBP12.72□□□□□ -0.37
DNMT1-218ENST00000589294 CALR3Q96L12 384 aaKnown RBP12.72□□□□□ -0.37
DNMT1-218ENST00000589294 CYP2S1Q96SQ9 504 aa12.72□□□□□ -0.37
DNMT1-218ENST00000589294 PHF7Q9BWX1 381 aaPredicted RBP12.72□□□□□ -0.37
DNMT1-218ENST00000589294 PACSIN1Q9BY11 444 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms