RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 IQCKQ8N0W5 287 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 ALLCQ8N6M5 410 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 TTC13Q8NBP0 860 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 BBOF1Q8ND07 529 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 SPATA18Q8TC71 538 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 TEKT4Q8WW24 435 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 KCTD13Q8WZ19 329 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 NDRG1Q92597 394 aaKnown RBP9.15□□□□□ -0.94
SMAD4-206ENST00000588860 MYLPFQ96A32 169 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 FAM149B1Q96BN6 582 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 SH3GL2Q99962 352 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 SNRNP25Q9BV90 132 aaKnown RBP9.15□□□□□ -0.94
SMAD4-206ENST00000588860 MAK16Q9BXY0 300 aaKnown RBP9.15□□□□□ -0.94
SMAD4-206ENST00000588860 SEZ6LQ9BYH1 1024 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 FRMD8P1Q9BZ68 369 aaPredicted RBP9.15□□□□□ -0.94
SMAD4-206ENST00000588860 TXLNGYQ9BZA5 131 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 ANAPC5Q9UJX4 755 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 DSEQ9UL01 958 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 VPS9D1Q9Y2B5 631 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 NR2E3Q9Y5X4 410 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 M0QZQ0 153 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 SGK1O00141 431 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 FBXO21O94952 628 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 CYP11A1P05108 521 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 ITGAVP06756 1048 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 ITIH2P19823 946 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 PAX3P23760 479 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 KLRC2P26717 231 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 SULT1E1P49888 294 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 ARSEP51690 589 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 TKTL1P51854 596 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 HDAC4P56524 1084 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 MRPS5P82675 430 aaKnown RBP9.14□□□□□ -0.95
SMAD4-206ENST00000588860 CAV1Q03135 178 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 ADCY1Q08828 1119 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 TFDP2Q14188 446 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 PDK2Q15119 407 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 BOLA3Q53S33 107 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 TTMPQ5BVD1 217 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 ZC3H12AQ5D1E8 599 aaKnown RBP9.14□□□□□ -0.95
SMAD4-206ENST00000588860 NOMO2Q5JPE7 1267 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 INTS6LQ5JSJ4 861 aaKnown RBP9.14□□□□□ -0.95
SMAD4-206ENST00000588860 SPDYCQ5MJ68 293 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 CEP85LQ5SZL2 805 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 OVOS1Q6IE37 1185 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 Q7L0L9 218 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 ARCQ7LC44 396 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 PRUNE1Q86TP1 453 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 FAM126BQ8IXS8 530 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 DEFB106AQ8N104 65 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 THEM5Q8N1Q8 247 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 CCDC89Q8N998 374 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 MYCBPAPQ8TBZ2 947 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 ACTL9Q8TC94 416 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 CCHCR1Q8TD31 782 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.14□□□□□ -0.95
SMAD4-206ENST00000588860 RSPH1Q8WYR4 309 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 NKD2Q969F2 451 aaPredicted RBP9.14□□□□□ -0.95
SMAD4-206ENST00000588860 ARL8AQ96BM9 186 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 SMARCD1Q96GM5 515 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 PCED1BQ96HM7 432 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 FAM193BQ96PV7 902 aaPredicted RBP9.14□□□□□ -0.95
SMAD4-206ENST00000588860 KCNK17Q96T54 332 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 TBCBQ99426 244 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 SMOQ99835 787 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 RTP3Q9BQQ7 232 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 DDX23Q9BUQ8 820 aaKnown RBP9.14□□□□□ -0.95
SMAD4-206ENST00000588860 FTHL17Q9BXU8 183 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 ULBP1Q9BZM6 244 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 FAM204AQ9H8W3 233 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 MTMR10Q9NXD2 777 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 DRG1Q9Y295 367 aaKnown RBP9.14□□□□□ -0.95
SMAD4-206ENST00000588860 NEU2Q9Y3R4 380 aa9.14□□□□□ -0.95
SMAD4-206ENST00000588860 LAMA3Q16787 3333 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 MYO18AQ92614 2054 aaKnown RBP9.13□□□□□ -0.95
SMAD4-206ENST00000588860 GOLGA6CA6NDK9 693 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 GOLGA6L10A6NI86 522 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 F8W810 466 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 APOC4-APOC2K7ER74 178 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 MCF2LO15068 1137 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 MDM4O15151 490 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 B4GALT3O60512 393 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 NBNO60934 754 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 APOC2P02655 101 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 ITGB1P05556 798 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 ZSCAN5DPP0CG00 497 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 GOLGA6DP0CG33 693 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 CCL5P13501 91 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 ETS1P14921 441 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 PECAM1P16284 738 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-206ENST00000588860 TYMPP19971 482 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 IVDP26440 423 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 CHKAP35790 457 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 MATKP42679 507 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 OR1G1P47890 313 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 NDUFV1P49821 464 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 CDK7P50613 346 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 CACNA2D1P54289 1103 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 PTPN5P54829 565 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 EIF3EP60228 445 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms