RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 VIPR2P41587 438 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 ADIGQ0VDE8 80 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 UBALD2Q8IYN6 164 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 SIX6OS1Q8N1H7 587 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 EPS8L1Q8TE68 723 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 STK32AQ8WU08 396 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 SLC22A12Q96S37 553 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 KIF9Q9HAQ2 790 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 LUC7LQ9NQ29 371 aaKnown RBP21.15■□□□□ 0.98
ATG4D-208ENST00000588667 DUSP12Q9UNI6 340 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 KIF26AQ9ULI4 1882 aaPredicted RBP21.15■□□□□ 0.98
ATG4D-208ENST00000588667 DPYSL4O14531 572 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 ZBED1O96006 694 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 ALADP13716 330 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 HDCP19113 662 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 PSEN1P49768 467 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 RGS7P49802 495 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 ZNF268Q14587 947 aaPredicted RBP21.15■□□□□ 0.98
ATG4D-208ENST00000588667 HECTD3Q5T447 861 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 PM20D1Q6GTS8 502 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 SCML4Q8N228 414 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 TXLNBQ8N3L3 684 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 CELF5Q8N6W0 485 aaKnown RBP21.15■□□□□ 0.98
ATG4D-208ENST00000588667 ARL14EPQ8N8R7 260 aaPredicted RBP21.15■□□□□ 0.98
ATG4D-208ENST00000588667 DEPDC1BQ8WUY9 529 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.15■□□□□ 0.98
ATG4D-208ENST00000588667 ULBP1Q9BZM6 244 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 SMG9Q9H0W8 520 aaKnown RBP21.15■□□□□ 0.98
ATG4D-208ENST00000588667 LHX5Q9H2C1 402 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 CNGB3Q9NQW8 809 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 TDP1Q9NUW8 608 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 REXO2Q9Y3B8 237 aaKnown RBP21.15■□□□□ 0.98
ATG4D-208ENST00000588667 HEPACAM2A8MVW5 462 aa21.14■□□□□ 0.97
ATG4D-208ENST00000588667 RPL34P49207 117 aaKnown RBP21.14■□□□□ 0.97
ATG4D-208ENST00000588667 SLC18A3Q16572 532 aa21.14■□□□□ 0.97
ATG4D-208ENST00000588667 ARHGAP29Q52LW3 1261 aa21.14■□□□□ 0.97
ATG4D-208ENST00000588667 VITQ6UXI7 678 aa21.14■□□□□ 0.97
ATG4D-208ENST00000588667 KIAA1328Q86T90 577 aa21.14■□□□□ 0.97
ATG4D-208ENST00000588667 ARHGAP18Q8N392 663 aa21.14■□□□□ 0.97
ATG4D-208ENST00000588667 USP13Q92995 863 aaPredicted RBP21.14■□□□□ 0.97
ATG4D-208ENST00000588667 RSPRY1Q96DX4 576 aa21.14■□□□□ 0.97
ATG4D-208ENST00000588667 CYP2S1Q96SQ9 504 aa21.14■□□□□ 0.97
ATG4D-208ENST00000588667 PLA2G2FQ9BZM2 168 aa21.14■□□□□ 0.97
ATG4D-208ENST00000588667 CYLDQ9NQC7 956 aa21.14■□□□□ 0.97
ATG4D-208ENST00000588667 CEP83Q9Y592 693 aa21.14■□□□□ 0.97
ATG4D-208ENST00000588667 TECTAO75443 2155 aa21.13■□□□□ 0.97
ATG4D-208ENST00000588667 A0A1W2PQH9 124 aa21.13■□□□□ 0.97
ATG4D-208ENST00000588667 SRFP11831 508 aa21.13■□□□□ 0.97
ATG4D-208ENST00000588667 PSMC3P17980 439 aa21.13■□□□□ 0.97
ATG4D-208ENST00000588667 ACADSBP45954 432 aa21.13■□□□□ 0.97
ATG4D-208ENST00000588667 PGFP49763 221 aa21.13■□□□□ 0.97
ATG4D-208ENST00000588667 GFPT1Q06210 699 aaPredicted RBP21.13■□□□□ 0.97
ATG4D-208ENST00000588667 ZNF571Q7Z3V5 609 aaPredicted RBP21.13■□□□□ 0.97
ATG4D-208ENST00000588667 NOP9Q86U38 636 aaKnown RBP21.13■□□□□ 0.97
ATG4D-208ENST00000588667 ZNF677Q86XU0 584 aa21.13■□□□□ 0.97
ATG4D-208ENST00000588667 PASD1Q8IV76 773 aa21.13■□□□□ 0.97
ATG4D-208ENST00000588667 MFSD6LQ8IWD5 586 aa21.13■□□□□ 0.97
ATG4D-208ENST00000588667 DDX1Q92499 740 aaKnown RBP21.13■□□□□ 0.97
ATG4D-208ENST00000588667 NMUR1Q9HB89 426 aa21.13■□□□□ 0.97
ATG4D-208ENST00000588667 CLIC5Q9NZA1 410 aa21.13■□□□□ 0.97
ATG4D-208ENST00000588667 CYTH4Q9UIA0 394 aa21.13■□□□□ 0.97
ATG4D-208ENST00000588667 NAGPAQ9UK23 515 aa21.13■□□□□ 0.97
ATG4D-208ENST00000588667 ARHGAP26Q9UNA1 814 aa21.13■□□□□ 0.97
ATG4D-208ENST00000588667 CCL26Q9Y258 94 aa21.13■□□□□ 0.97
ATG4D-208ENST00000588667 PI4K2BG5E9Z4 385 aa21.12■□□□□ 0.97
ATG4D-208ENST00000588667 DLL1O00548 723 aa21.12■□□□□ 0.97
ATG4D-208ENST00000588667 TLR5O60602 858 aa21.12■□□□□ 0.97
ATG4D-208ENST00000588667 GABBR2O75899 941 aa21.12■□□□□ 0.97
ATG4D-208ENST00000588667 LCP1P13796 627 aa21.12■□□□□ 0.97
ATG4D-208ENST00000588667 TNNT1P13805 278 aa21.12■□□□□ 0.97
ATG4D-208ENST00000588667 SLC7A9P82251 487 aa21.12■□□□□ 0.97
ATG4D-208ENST00000588667 ZXDAP98168 799 aa21.12■□□□□ 0.97
ATG4D-208ENST00000588667 PDCLQ13371 301 aa21.12■□□□□ 0.97
ATG4D-208ENST00000588667 ZNF662Q6ZS27 426 aa21.12■□□□□ 0.97
ATG4D-208ENST00000588667 SCD5Q86SK9 330 aa21.12■□□□□ 0.97
ATG4D-208ENST00000588667 SLC4A5Q9BY07 1137 aa21.12■□□□□ 0.97
ATG4D-208ENST00000588667 RNF38Q9H0F5 515 aa21.12■□□□□ 0.97
ATG4D-208ENST00000588667 PDCL3Q9H2J4 239 aa21.12■□□□□ 0.97
ATG4D-208ENST00000588667 SMOC2Q9H3U7 446 aa21.12■□□□□ 0.97
ATG4D-208ENST00000588667 CCSER2Q9H7U1 834 aa21.12■□□□□ 0.97
ATG4D-208ENST00000588667 LZTFL1Q9NQ48 299 aa21.12■□□□□ 0.97
ATG4D-208ENST00000588667 ST7Q9NRC1 585 aa21.12■□□□□ 0.97
ATG4D-208ENST00000588667 OSER1Q9NX31 292 aa21.12■□□□□ 0.97
ATG4D-208ENST00000588667 ADAMTS1Q9UHI8 967 aa21.12■□□□□ 0.97
ATG4D-208ENST00000588667 NOCTQ9UK39 431 aaKnown RBP21.12■□□□□ 0.97
ATG4D-208ENST00000588667 PCDHA13Q9Y5I0 950 aa21.12■□□□□ 0.97
ATG4D-208ENST00000588667 COCHO43405 550 aa21.11■□□□□ 0.97
ATG4D-208ENST00000588667 NARSO43776 548 aaKnown RBP21.11■□□□□ 0.97
ATG4D-208ENST00000588667 FBXO21O94952 628 aa21.11■□□□□ 0.97
ATG4D-208ENST00000588667 VAV2P52735 878 aa21.11■□□□□ 0.97
ATG4D-208ENST00000588667 DAOAP59103 153 aa21.11■□□□□ 0.97
ATG4D-208ENST00000588667 FCHO2Q0JRZ9 810 aa21.11■□□□□ 0.97
ATG4D-208ENST00000588667 GRM2Q14416 872 aa21.11■□□□□ 0.97
ATG4D-208ENST00000588667 TAF3Q5VWG9 929 aa21.11■□□□□ 0.97
ATG4D-208ENST00000588667 BHLHA9Q7RTU4 235 aa21.11■□□□□ 0.97
ATG4D-208ENST00000588667 ZNF276Q8N554 614 aa21.11■□□□□ 0.97
ATG4D-208ENST00000588667 BPIFB1Q8TDL5 484 aa21.11■□□□□ 0.97
ATG4D-208ENST00000588667 EDAQ92838 391 aa21.11■□□□□ 0.97
ATG4D-208ENST00000588667 NOX5Q96PH1 765 aa21.11■□□□□ 0.97
ATG4D-208ENST00000588667 TRMT61BQ9BVS5 477 aaKnown RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms