RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, human

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC2-211	ENST00000588652	EFTUD2	Q15029	972 aa	Known RBP eCLIP	18.28	■□□□□ 0.52	2e-6	■■■■■ 28.4
ERCC2-211	ENST00000588652	SLC1A5	Q15758	541 aa		18.28	■□□□□ 0.52
ERCC2-211	ENST00000588652	MSS51	Q4VC12	460 aa		18.28	■□□□□ 0.52
ERCC2-211	ENST00000588652	BOLA3	Q53S33	107 aa		18.28	■□□□□ 0.52
ERCC2-211	ENST00000588652	FNBP1L	Q5T0N5	605 aa		18.28	■□□□□ 0.52
ERCC2-211	ENST00000588652	SCYL2	Q6P3W7	929 aa		18.28	■□□□□ 0.52
ERCC2-211	ENST00000588652	CRYBG2	Q8N1P7	616 aa		18.28	■□□□□ 0.52
ERCC2-211	ENST00000588652	TBC1D31	Q96DN5	1066 aa		18.28	■□□□□ 0.52
ERCC2-211	ENST00000588652	RNF157	Q96PX1	679 aa		18.28	■□□□□ 0.52
ERCC2-211	ENST00000588652	WDR83	Q9BRX9	315 aa	Known RBP	18.28	■□□□□ 0.52
ERCC2-211	ENST00000588652	AP5M1	Q9H0R1	490 aa		18.28	■□□□□ 0.52
ERCC2-211	ENST00000588652	GDAP2	Q9NXN4	497 aa		18.28	■□□□□ 0.52
ERCC2-211	ENST00000588652	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	18.28	■□□□□ 0.52
ERCC2-211	ENST00000588652	DNAH12	Q6ZR08	3092 aa		18.28	■□□□□ 0.52
ERCC2-211	ENST00000588652	CA4	P22748	312 aa		18.27	■□□□□ 0.52
ERCC2-211	ENST00000588652	IL4R	P24394	825 aa		18.27	■□□□□ 0.52
ERCC2-211	ENST00000588652	LMO2	P25791	158 aa		18.27	■□□□□ 0.52
ERCC2-211	ENST00000588652	SKIV2L2	P42285	1042 aa	Known RBP	18.27	■□□□□ 0.52
ERCC2-211	ENST00000588652	CRYBB1	P53674	252 aa	Predicted RBP	18.27	■□□□□ 0.52
ERCC2-211	ENST00000588652	ARL4C	P56559	192 aa		18.27	■□□□□ 0.52
ERCC2-211	ENST00000588652	SNX16	P57768	344 aa		18.27	■□□□□ 0.52
ERCC2-211	ENST00000588652	SOX4	Q06945	474 aa	Predicted RBP	18.27	■□□□□ 0.52
ERCC2-211	ENST00000588652	FAM47C	Q5HY64	1035 aa		18.27	■□□□□ 0.52
ERCC2-211	ENST00000588652	ZDHHC17	Q8IUH5	632 aa		18.27	■□□□□ 0.52
ERCC2-211	ENST00000588652	MAP7D3	Q8IWC1	876 aa		18.27	■□□□□ 0.52
ERCC2-211	ENST00000588652	ZNF560	Q96MR9	790 aa		18.27	■□□□□ 0.52
ERCC2-211	ENST00000588652	TACO1	Q9BSH4	297 aa	Known RBP	18.27	■□□□□ 0.52
ERCC2-211	ENST00000588652	GOLGA2P5	Q9HBQ8	144 aa		18.27	■□□□□ 0.52
ERCC2-211	ENST00000588652	SLCO1B3	Q9NPD5	702 aa		18.27	■□□□□ 0.52
ERCC2-211	ENST00000588652	C17orf102	A2RUQ5	167 aa		18.27	■□□□□ 0.51
ERCC2-211	ENST00000588652	XPOT	O43592	962 aa	Known RBP	18.27	■□□□□ 0.51
ERCC2-211	ENST00000588652	CCDC130	P13994	396 aa		18.27	■□□□□ 0.51
ERCC2-211	ENST00000588652	GNL1	P36915	607 aa	Predicted RBP	18.27	■□□□□ 0.51
ERCC2-211	ENST00000588652	GEMIN4	P57678	1058 aa	Known RBP	18.27	■□□□□ 0.51
ERCC2-211	ENST00000588652	KRT81	Q14533	505 aa		18.27	■□□□□ 0.51
ERCC2-211	ENST00000588652	PDK2	Q15119	407 aa		18.27	■□□□□ 0.51
ERCC2-211	ENST00000588652	ZC3H12A	Q5D1E8	599 aa	Known RBP	18.27	■□□□□ 0.51
ERCC2-211	ENST00000588652	ZNF618	Q5T7W0	954 aa		18.27	■□□□□ 0.51
ERCC2-211	ENST00000588652	ZC3H18	Q86VM9	953 aa	Known RBP	18.27	■□□□□ 0.51
ERCC2-211	ENST00000588652	ANKRD52	Q8NB46	1076 aa		18.27	■□□□□ 0.51
ERCC2-211	ENST00000588652	TEKT4	Q8WW24	435 aa		18.27	■□□□□ 0.51
ERCC2-211	ENST00000588652	THOC1	Q96FV9	657 aa	Known RBP	18.27	■□□□□ 0.51
ERCC2-211	ENST00000588652	ADAM33	Q9BZ11	813 aa		18.27	■□□□□ 0.51
ERCC2-211	ENST00000588652	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	18.27	■□□□□ 0.51
ERCC2-211	ENST00000588652		Q9Y3F1	56 aa		18.27	■□□□□ 0.51
ERCC2-211	ENST00000588652	EDF1	O60869	148 aa	Known RBP	18.26	■□□□□ 0.51
ERCC2-211	ENST00000588652	IBSP	P21815	317 aa	Predicted RBP	18.26	■□□□□ 0.51
ERCC2-211	ENST00000588652	SSTR1	P30872	391 aa		18.26	■□□□□ 0.51
ERCC2-211	ENST00000588652	STIP1	P31948	543 aa	Known RBP	18.26	■□□□□ 0.51
ERCC2-211	ENST00000588652	GBP2	P32456	591 aa	Predicted RBP	18.26	■□□□□ 0.51
ERCC2-211	ENST00000588652	PNPLA4	P41247	253 aa		18.26	■□□□□ 0.51
ERCC2-211	ENST00000588652	NRL	P54845	237 aa		18.26	■□□□□ 0.51
ERCC2-211	ENST00000588652	BST2	Q10589	180 aa	Known RBP	18.26	■□□□□ 0.51
ERCC2-211	ENST00000588652	RASAL3	Q86YV0	1011 aa		18.26	■□□□□ 0.51
ERCC2-211	ENST00000588652	ATP11C	Q8NB49	1132 aa		18.26	■□□□□ 0.51
ERCC2-211	ENST00000588652	PYROXD1	Q8WU10	500 aa		18.26	■□□□□ 0.51
ERCC2-211	ENST00000588652	TBCB	Q99426	244 aa		18.26	■□□□□ 0.51
ERCC2-211	ENST00000588652	KATNAL1	Q9BW62	490 aa		18.26	■□□□□ 0.51
ERCC2-211	ENST00000588652	MYLK2	Q9H1R3	596 aa		18.26	■□□□□ 0.51
ERCC2-211	ENST00000588652	GPATCH2L	Q9NWQ4	482 aa		18.26	■□□□□ 0.51
ERCC2-211	ENST00000588652	FETUB	Q9UGM5	382 aa		18.26	■□□□□ 0.51
ERCC2-211	ENST00000588652	IPP	Q9Y573	584 aa		18.26	■□□□□ 0.51
ERCC2-211	ENST00000588652	TCRBV7S3A2	A0A539	114 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652		E7ESA3	106 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	UNC5C	O95185	931 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	ADORA2B	P29275	332 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	HOXC8	P31273	242 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	TAF6	P49848	677 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	BCAT1	P54687	386 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	HDAC4	P56524	1084 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	ROR1	Q01973	937 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	C17orf99	Q6UX52	265 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	PLCD3	Q8N3E9	789 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	TAB3	Q8N5C8	712 aa	Predicted RBP	18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	ARRDC4	Q8NCT1	418 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	SMG8	Q8ND04	991 aa	Known RBP	18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	CLEC4C	Q8WTT0	213 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	TSPAN18	Q96SJ8	248 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	DHRS4	Q9BTZ2	278 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	SNRNP25	Q9BV90	132 aa	Known RBP	18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	SSU72	Q9NP77	194 aa	Known RBP	18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652		A8MUI8	341 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	TMEM63A	O94886	807 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	ZNF157	P51786	506 aa	Predicted RBP	18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	FSCN1	Q16658	493 aa	Known RBP	18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	DARS2	Q6PI48	645 aa	Known RBP	18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	LIMS2	Q7Z4I7	341 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	PLD5	Q8N7P1	536 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	APPL2	Q8NEU8	664 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	LRRC8C	Q8TDW0	803 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	FBF1	Q8TES7	1133 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	AGAP11	Q8TF27	550 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	PCDH18	Q9HCL0	1135 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	USH1C	Q9Y6N9	552 aa		18.25	■□□□□ 0.51
ERCC2-211	ENST00000588652	MANSC4	A6NHS7	340 aa	Predicted RBP	18.24	■□□□□ 0.51
ERCC2-211	ENST00000588652	MDM4	O15151	490 aa		18.24	■□□□□ 0.51
ERCC2-211	ENST00000588652	IGHA2	P01877	340 aa		18.24	■□□□□ 0.51
ERCC2-211	ENST00000588652	DES	P17661	470 aa		18.24	■□□□□ 0.51
ERCC2-211	ENST00000588652	TFE3	P19532	575 aa	Predicted RBP	18.24	■□□□□ 0.51

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