RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 TTYH3Q9C0H2 523 aa21.2■□□□□ 0.98
DDX39A-207ENST00000588542 MIS12Q9H081 205 aa21.2■□□□□ 0.98
DDX39A-207ENST00000588542 HEBP1Q9NRV9 189 aa21.2■□□□□ 0.98
DDX39A-207ENST00000588542 IFNKQ9P0W0 207 aa21.2■□□□□ 0.98
DDX39A-207ENST00000588542 SHISA7A6NL88 538 aa21.19■□□□□ 0.98
DDX39A-207ENST00000588542 PRR33A8MZF0 331 aa21.19■□□□□ 0.98
DDX39A-207ENST00000588542 E5RJQ4 531 aa21.19■□□□□ 0.98
DDX39A-207ENST00000588542 FBXO21O94952 628 aa21.19■□□□□ 0.98
DDX39A-207ENST00000588542 MMEP08473 750 aa21.19■□□□□ 0.98
DDX39A-207ENST00000588542 RALAP11233 206 aa21.19■□□□□ 0.98
DDX39A-207ENST00000588542 CHRNB2P17787 502 aa21.19■□□□□ 0.98
DDX39A-207ENST00000588542 CDH5P33151 784 aaPredicted RBP21.19■□□□□ 0.98
DDX39A-207ENST00000588542 TNK2Q07912 1038 aa21.19■□□□□ 0.98
DDX39A-207ENST00000588542 MLF2Q15773 248 aaPredicted RBP21.19■□□□□ 0.98
DDX39A-207ENST00000588542 C10orf120Q5SQS8 335 aa21.19■□□□□ 0.98
DDX39A-207ENST00000588542 BSPRYQ5W0U4 402 aa21.19■□□□□ 0.98
DDX39A-207ENST00000588542 TRIM68Q6AZZ1 485 aa21.19■□□□□ 0.98
DDX39A-207ENST00000588542 CACNA2D4Q7Z3S7 1137 aa21.19■□□□□ 0.98
DDX39A-207ENST00000588542 CPXM1Q96SM3 734 aa21.19■□□□□ 0.98
DDX39A-207ENST00000588542 LRFN3Q9BTN0 628 aa21.19■□□□□ 0.98
DDX39A-207ENST00000588542 HPS4Q9NQG7 708 aa21.19■□□□□ 0.98
DDX39A-207ENST00000588542 CFAP97Q9P2B7 532 aa21.19■□□□□ 0.98
DDX39A-207ENST00000588542 F5P12259 2224 aa21.19■□□□□ 0.98
DDX39A-207ENST00000588542 ZDBF2Q9HCK1 2354 aa21.18■□□□□ 0.98
DDX39A-207ENST00000588542 PAPSS1O43252 624 aaPredicted RBP21.18■□□□□ 0.98
DDX39A-207ENST00000588542 STARD6P59095 220 aa21.18■□□□□ 0.98
DDX39A-207ENST00000588542 DDX42Q86XP3 938 aaKnown RBP eCLIP21.18■□□□□ 0.984e-6■□□□□ 8.2
DDX39A-207ENST00000588542 ZNF677Q86XU0 584 aa21.18■□□□□ 0.98
DDX39A-207ENST00000588542 KIAA1958Q8N8K9 716 aa21.18■□□□□ 0.98
DDX39A-207ENST00000588542 OSCP1Q8WVF1 389 aa21.18■□□□□ 0.98
DDX39A-207ENST00000588542 PBXIP1Q96AQ6 731 aa21.18■□□□□ 0.98
DDX39A-207ENST00000588542 PPP1R13BQ96KQ4 1090 aa21.18■□□□□ 0.98
DDX39A-207ENST00000588542 CDK5RAP1Q96SZ6 601 aaKnown RBP21.18■□□□□ 0.98
DDX39A-207ENST00000588542 NACA2Q9H009 215 aa21.18■□□□□ 0.98
DDX39A-207ENST00000588542 GTSE1Q9NYZ3 720 aa21.18■□□□□ 0.98
DDX39A-207ENST00000588542 DNMT3LQ9UJW3 386 aa21.18■□□□□ 0.98
DDX39A-207ENST00000588542 MYO6Q9UM54 1294 aa21.18■□□□□ 0.98
DDX39A-207ENST00000588542 WNT6Q9Y6F9 365 aa21.18■□□□□ 0.98
DDX39A-207ENST00000588542 OTOL1A6NHN0 477 aaPredicted RBP21.17■□□□□ 0.98
DDX39A-207ENST00000588542 GREM1O60565 184 aa21.17■□□□□ 0.98
DDX39A-207ENST00000588542 LTFP02788 710 aa21.17■□□□□ 0.98
DDX39A-207ENST00000588542 ARSAP15289 507 aa21.17■□□□□ 0.98
DDX39A-207ENST00000588542 FMO1Q01740 532 aa21.17■□□□□ 0.98
DDX39A-207ENST00000588542 CDR2Q01850 454 aa21.17■□□□□ 0.98
DDX39A-207ENST00000588542 PRKCQQ04759 706 aa21.17■□□□□ 0.98
DDX39A-207ENST00000588542 EML3Q32P44 896 aa21.17■□□□□ 0.98
DDX39A-207ENST00000588542 PTPN20Q4JDL3 420 aa21.17■□□□□ 0.98
DDX39A-207ENST00000588542 FIGNQ5HY92 759 aa21.17■□□□□ 0.98
DDX39A-207ENST00000588542 BTBD8Q5XKL5 378 aa21.17■□□□□ 0.98
DDX39A-207ENST00000588542 CC2D1AQ6P1N0 951 aaPredicted RBP21.17■□□□□ 0.98
DDX39A-207ENST00000588542 TADA2BQ86TJ2 420 aa21.17■□□□□ 0.98
DDX39A-207ENST00000588542 CSGALNACT1Q8TDX6 532 aa21.17■□□□□ 0.98
DDX39A-207ENST00000588542 EDEM1Q92611 657 aa21.17■□□□□ 0.98
DDX39A-207ENST00000588542 DDX23Q9BUQ8 820 aaKnown RBP21.17■□□□□ 0.98
DDX39A-207ENST00000588542 XPO4Q9C0E2 1151 aaKnown RBP21.17■□□□□ 0.98
DDX39A-207ENST00000588542 LINC00597Q9H2U6 94 aa21.17■□□□□ 0.98
DDX39A-207ENST00000588542 EBF3Q9H4W6 596 aa21.17■□□□□ 0.98
DDX39A-207ENST00000588542 ABCC13Q9NSE7 274 aa21.17■□□□□ 0.98
DDX39A-207ENST00000588542 DUS2Q9NX74 493 aaKnown RBP21.17■□□□□ 0.98
DDX39A-207ENST00000588542 ZNF318Q5VUA4 2279 aa21.16■□□□□ 0.98
DDX39A-207ENST00000588542 E2F8A0AVK6 867 aa21.16■□□□□ 0.98
DDX39A-207ENST00000588542 SCAMP3O14828 347 aaKnown RBP21.16■□□□□ 0.98
DDX39A-207ENST00000588542 FYNP06241 537 aa21.16■□□□□ 0.98
DDX39A-207ENST00000588542 IRF1P10914 325 aa21.16■□□□□ 0.98
DDX39A-207ENST00000588542 ARID5AQ03989 594 aa21.16■□□□□ 0.98
DDX39A-207ENST00000588542 EFEMP1Q12805 493 aa21.16■□□□□ 0.98
DDX39A-207ENST00000588542 PDGFRLQ15198 375 aa21.16■□□□□ 0.98
DDX39A-207ENST00000588542 CWF19L1Q69YN2 538 aaKnown RBP21.16■□□□□ 0.98
DDX39A-207ENST00000588542 TPRG1Q6ZUI0 275 aa21.16■□□□□ 0.98
DDX39A-207ENST00000588542 IRF2BP2Q7Z5L9 587 aa21.16■□□□□ 0.98
DDX39A-207ENST00000588542 TMEM35BQ8NCS4 154 aa21.16■□□□□ 0.98
DDX39A-207ENST00000588542 TTC8Q8TAM2 541 aa21.16■□□□□ 0.98
DDX39A-207ENST00000588542 PIWIL1Q96J94 861 aaKnown RBP21.16■□□□□ 0.98
DDX39A-207ENST00000588542 PDCL3Q9H2J4 239 aa21.16■□□□□ 0.98
DDX39A-207ENST00000588542 TBC1D17Q9HA65 648 aa21.16■□□□□ 0.98
DDX39A-207ENST00000588542 CEP83Q9Y592 693 aa21.16■□□□□ 0.98
DDX39A-207ENST00000588542 LRRC53A6NM62 1247 aa21.15■□□□□ 0.98
DDX39A-207ENST00000588542 LSM8O95777 96 aaKnown RBP21.15■□□□□ 0.98
DDX39A-207ENST00000588542 ERBB2P04626 1255 aa21.15■□□□□ 0.98
DDX39A-207ENST00000588542 SOX9P48436 509 aa21.15■□□□□ 0.98
DDX39A-207ENST00000588542 IFNAR2P48551 515 aa21.15■□□□□ 0.98
DDX39A-207ENST00000588542 MLLT6P55198 1093 aaPredicted RBP21.15■□□□□ 0.98
DDX39A-207ENST00000588542 NOMO3P69849 1222 aa21.15■□□□□ 0.98
DDX39A-207ENST00000588542 RUNX3Q13761 415 aa21.15■□□□□ 0.98
DDX39A-207ENST00000588542 ITPRIPL2Q3MIP1 535 aa21.15■□□□□ 0.98
DDX39A-207ENST00000588542 RSRC2Q7L4I2 434 aaKnown RBP21.15■□□□□ 0.98
DDX39A-207ENST00000588542 MIB1Q86YT6 1006 aa21.15■□□□□ 0.98
DDX39A-207ENST00000588542 FBXL6Q8N531 539 aa21.15■□□□□ 0.98
DDX39A-207ENST00000588542 CHFRQ96EP1 664 aa21.15■□□□□ 0.98
DDX39A-207ENST00000588542 NOX5Q96PH1 765 aa21.15■□□□□ 0.98
DDX39A-207ENST00000588542 EDEM3Q9BZQ6 932 aa21.15■□□□□ 0.98
DDX39A-207ENST00000588542 MFSD1Q9H3U5 465 aa21.15■□□□□ 0.98
DDX39A-207ENST00000588542 OLA1Q9NTK5 396 aaKnown RBP21.15■□□□□ 0.98
DDX39A-207ENST00000588542 RASAL2Q9UJF2 1139 aa21.15■□□□□ 0.98
DDX39A-207ENST00000588542 PIAS3Q9Y6X2 628 aa21.15■□□□□ 0.98
DDX39A-207ENST00000588542 SART1O43290 800 aaKnown RBP21.14■□□□□ 0.97
DDX39A-207ENST00000588542 STC2O76061 302 aa21.14■□□□□ 0.97
DDX39A-207ENST00000588542 CYP1A1P04798 512 aaPredicted RBP21.14■□□□□ 0.97
DDX39A-207ENST00000588542 GLULP15104 373 aa21.14■□□□□ 0.97
DDX39A-207ENST00000588542 FERP16591 822 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms