RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 OR1D2P34982 312 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 GPC5P78333 572 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 ZBED6P86452 979 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 DHX9Q08211 1270 aaKnown RBP8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 MRPL58Q14197 206 aaKnown RBP8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 SLC39A12Q504Y0 691 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 TAF3Q5VWG9 929 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 RSPO2Q6UXX9 243 aaPredicted RBP8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 PRR23CQ6ZRP0 262 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 GET4Q7L5D6 327 aaPredicted RBP8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 FAM71AQ8IYT1 594 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 C12orf29Q8N999 325 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 TSEN2Q8NCE0 465 aaKnown RBP8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 B3GALNT2Q8NCR0 500 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 CMASQ8NFW8 434 aaPredicted RBP8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 NXPE3Q969Y0 559 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 JAKMIP2Q96AA8 810 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 TMEM176AQ96HP8 235 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 TNIP3Q96KP6 325 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 PGLYRP2Q96PD5 576 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 MED10Q9BTT4 135 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 ACP6Q9NPH0 428 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 CRTAC1Q9NQ79 661 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 CYLDQ9NQC7 956 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 PRMT8Q9NR22 394 aaPredicted RBP8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 SEMA4GQ9NTN9 838 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 MTRRQ9UBK8 725 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 STK39Q9UEW8 545 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 CDH9Q9ULB4 789 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 SSX2IPQ9Y2D8 614 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 SETXQ7Z333 2677 aaKnown RBP8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 NOTCH4Q99466 2003 aa8.92□□□□□ -0.98
NEDD4L-218ENST00000587547 FAM170AA1A519 330 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 MYBPHLA2RUH7 354 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 PTMAP06454 111 aaKnown RBP8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 PAEPP09466 180 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 VDRP11473 427 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 SKILP12757 684 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 LAMP2P13473 410 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 CCDC130P13994 396 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 SERPINB4P48594 390 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 PDE6CP51160 858 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 ZNF132P52740 706 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 CYP27A1Q02318 531 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 CREMQ03060 361 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 MLF2Q15773 248 aaPredicted RBP8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 GOLGA7BQ2TAP0 167 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 GLIPR1L2Q4G1C9 344 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 SGO2Q562F6 1265 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 TDRD12Q587J7 1177 aaKnown RBP8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 E4F1Q66K89 784 aaPredicted RBP8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 LRRTM3Q86VH5 581 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 SLC47A2Q86VL8 602 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 PALB2Q86YC2 1186 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 CNGA4Q8IV77 575 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 DCP1BQ8IZD4 617 aaKnown RBP8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 OR8K1Q8NGG5 319 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 SLC20A1Q8WUM9 679 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 TFAP2BQ92481 460 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 SMG7Q92540 1137 aaKnown RBP8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 MYLPFQ96A32 169 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 ZNF707Q96C28 371 aaPredicted RBP8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 SHDQ96IW2 340 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 CLSTN3Q9BQT9 956 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 ACBD6Q9BR61 282 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 EMILIN2Q9BXX0 1053 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 RHOBTB2Q9BYZ6 727 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 ZCWPW1Q9H0M4 648 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 PDCL3Q9H2J4 239 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 FAM124BQ9H5Z6 455 aaPredicted RBP8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 LTB4R2Q9NPC1 389 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 TMLHEQ9NVH6 421 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 ZNF358Q9NW07 568 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 ABI2Q9NYB9 513 aaPredicted RBP8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 GTF3C4Q9UKN8 822 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 MYO6Q9UM54 1294 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 CNTN6Q9UQ52 1028 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 BACE2Q9Y5Z0 518 aa8.91□□□□□ -0.98
NEDD4L-218ENST00000587547 IGF2RP11717 2491 aa8.9□□□□□ -0.98
NEDD4L-218ENST00000587547 ATP8B3O60423 1300 aa8.9□□□□□ -0.98
NEDD4L-218ENST00000587547 TMEM229AB2RXF0 380 aa8.9□□□□□ -0.98
NEDD4L-218ENST00000587547 CLDN5O00501 218 aa8.9□□□□□ -0.98
NEDD4L-218ENST00000587547 TEX28O15482 410 aa8.9□□□□□ -0.98
NEDD4L-218ENST00000587547 ZIC2O95409 532 aaPredicted RBP8.9□□□□□ -0.98
NEDD4L-218ENST00000587547 ADH1AP07327 375 aa8.9□□□□□ -0.98
NEDD4L-218ENST00000587547 CCDC172P0C7W6 258 aa8.9□□□□□ -0.98
NEDD4L-218ENST00000587547 SPATA31D3P0C874 917 aa8.9□□□□□ -0.98
NEDD4L-218ENST00000587547 TDGF1P13385 188 aa8.9□□□□□ -0.98
NEDD4L-218ENST00000587547 CYP11B1P15538 503 aa8.9□□□□□ -0.98
NEDD4L-218ENST00000587547 TARSP26639 723 aaKnown RBP8.9□□□□□ -0.98
NEDD4L-218ENST00000587547 BPIFB4P59827 614 aa8.9□□□□□ -0.98
NEDD4L-218ENST00000587547 ROR1Q01973 937 aa8.9□□□□□ -0.98
NEDD4L-218ENST00000587547 KLHL30Q0D2K2 578 aa8.9□□□□□ -0.98
NEDD4L-218ENST00000587547 PPP1R26Q5T8A7 1209 aaPredicted RBP8.9□□□□□ -0.98
NEDD4L-218ENST00000587547 LAIR1Q6GTX8 287 aa8.9□□□□□ -0.98
NEDD4L-218ENST00000587547 PARM1Q6UWI2 310 aa8.9□□□□□ -0.98
NEDD4L-218ENST00000587547 UNQ6494/PRO21346Q6UXR6 183 aa8.9□□□□□ -0.98
NEDD4L-218ENST00000587547 SPATA31D4Q6ZUB0 917 aa8.9□□□□□ -0.98
NEDD4L-218ENST00000587547 CCDC186Q7Z3E2 898 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms