RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 ATP5HO75947 161 aa10.05□□□□□ -0.8
GPATCH8-205ENST00000587228 PCDH8O95206 1070 aa10.05□□□□□ -0.8
GPATCH8-205ENST00000587228 ENO3P13929 434 aaPredicted RBP10.05□□□□□ -0.8
GPATCH8-205ENST00000587228 GLRBP48167 497 aa10.05□□□□□ -0.8
GPATCH8-205ENST00000587228 POU4F1Q01851 419 aa10.05□□□□□ -0.8
GPATCH8-205ENST00000587228 MED1Q15648 1581 aaPredicted RBP10.05□□□□□ -0.8
GPATCH8-205ENST00000587228 TTLL9Q3SXZ7 439 aa10.05□□□□□ -0.8
GPATCH8-205ENST00000587228 PLPPR4Q7Z2D5 763 aa10.05□□□□□ -0.8
GPATCH8-205ENST00000587228 CASKIN2Q8WXE0 1202 aa10.05□□□□□ -0.8
GPATCH8-205ENST00000587228 DNAJC19Q96DA6 116 aa10.05□□□□□ -0.8
GPATCH8-205ENST00000587228 CAPNS2Q96L46 248 aa10.05□□□□□ -0.8
GPATCH8-205ENST00000587228 FRMD8Q9BZ67 464 aaPredicted RBP10.05□□□□□ -0.8
GPATCH8-205ENST00000587228 DMGDHQ9UI17 866 aaKnown RBP10.05□□□□□ -0.8
GPATCH8-205ENST00000587228 C3P01024 1663 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 NCF1BA6NI72 391 aaPredicted RBP10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 NCF1CA8MVU1 366 aaPredicted RBP10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 WNT7AO00755 349 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 TRIM16O95361 564 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 LTFP02788 710 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 NCF1P14598 390 aaPredicted RBP10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 PTPN1P18031 435 aaKnown RBP10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 FAM83EQ2M2I3 478 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 ZNF284Q2VY69 593 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 NT5DC1Q5TFE4 455 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 TTC39BQ5VTQ0 682 aaPredicted RBP10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 ANKS3Q6ZW76 656 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 LGI2Q8N0V4 545 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 GRAMD1AQ96CP6 724 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 TMA16Q96EY4 203 aaKnown RBP10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 SGSM3Q96HU1 749 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 OSGEPL1Q9H4B0 414 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 WWOXQ9NZC7 414 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 VANGL2Q9ULK5 521 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 O00370 1275 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 SUPT7LO94864 414 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 HOXC6P09630 235 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 TPH1P17752 444 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 GEMIN4P57678 1058 aaKnown RBP10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 GTF2BQ00403 316 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 POU6F1Q14863 301 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 C11orf63Q6NUN7 778 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 TPGS1Q6ZTW0 290 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 NYAP1Q6ZVC0 841 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 SH3BP5LQ7L8J4 393 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 NT5DC3Q86UY8 548 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 COLGALT1Q8NBJ5 622 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 ETNPPLQ8TBG4 499 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 IL17RAQ96F46 866 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 ZNF558Q96NG5 402 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 IARS2Q9NSE4 1012 aaKnown RBP10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 LOC100653049A0A140TA62 436 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 VGLL3A8MV65 326 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 ZSCAN9O15535 394 aaPredicted RBP10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 PPP1R11O60927 126 aaPredicted RBP10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 KRT34O76011 436 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 SP100P23497 879 aaPredicted RBP10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 KPNA1P52294 538 aaPredicted RBP10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 TRADDQ15628 312 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 IL17AQ16552 155 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 DUSP28Q4G0W2 176 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 PKN3Q6P5Z2 889 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 OR5B17Q8NGF7 314 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 CD99L2Q8TCZ2 262 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 RUBCNQ92622 972 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 SERPINB11Q96P15 392 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 ING2Q9H160 280 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 UTP6Q9NYH9 597 aaKnown RBP10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 XYLBO75191 536 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 SERPINF2P08697 491 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 PAEPP09466 180 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 SPATA31C1P0DKV0 1188 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 GRK4P32298 578 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 INPP1P49441 399 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 MAPRE2Q15555 327 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 DENND1BQ6P3S1 775 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 MFSD7Q6UXD7 560 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 TMEM199Q8N511 208 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 LPCAT1Q8NF37 534 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 INPP4AQ96PE3 977 aaPredicted RBP10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 FAM111AQ96PZ2 611 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 LRRC40Q9H9A6 602 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 MRPL17Q9NRX2 175 aaKnown RBP10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 PNMA8BQ9ULN7 279 aaPredicted RBP10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 AURKCQ9UQB9 309 aa10.04□□□□□ -0.8
GPATCH8-205ENST00000587228 MRC1P22897 1456 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 MAP3K13O43283 966 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 YBX3P16989 372 aaKnown RBP eCLIP10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 ITGALP20701 1170 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 HSD17B3P37058 310 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 ATXN3P54252 364 aaPredicted RBP10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 PTENP60484 403 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 SLC6A3Q01959 620 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 NOMO2Q5JPE7 1267 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 C16orf59Q7L2K0 433 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 PTAR1Q7Z6K3 402 aaPredicted RBP10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 CLPBQ9H078 707 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 TRIM45Q9H8W5 580 aaPredicted RBP10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 MARCH2Q9P0N8 246 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 ITM2BQ9Y287 266 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms