RNA–Protein interactions for RNA: ENST00000586667.1

DNMT1-208, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-208ENST00000586667 PCDHA13Q9Y5I0 950 aa13.2□□□□□ -0.3
DNMT1-208ENST00000586667 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.2□□□□□ -0.3
DNMT1-208ENST00000586667 KIF26AQ9ULI4 1882 aaPredicted RBP13.2□□□□□ -0.3
DNMT1-208ENST00000586667 C2orf78A6NCI8 922 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 C2CD4BA6NLJ0 364 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 GRAP2O75791 330 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 IGLV3-25P01717 112 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 GLI1P08151 1106 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 H2AFZP0C0S5 128 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 MYL4P12829 197 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 PTPN2P17706 415 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 KCNA5P22460 613 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 ARHGAP25P42331 645 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 TUBP50607 506 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 VAV2P52735 878 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 RPL7AP62424 266 aaKnown RBP13.19□□□□□ -0.3
DNMT1-208ENST00000586667 TCEAL1Q15170 157 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 TEAD2Q15562 447 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 C10orf76Q5T2E6 689 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 SYPL2Q5VXT5 272 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 BSPRYQ5W0U4 402 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 MSANTD2Q6P1R3 559 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 H2AFVQ71UI9 128 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 PDZD4Q76G19 769 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-208ENST00000586667 ARCQ7LC44 396 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 BNIPLQ7Z465 357 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 MON1AQ86VX9 555 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 NPAS3Q8IXF0 933 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 EMC1Q8N766 993 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 PDZD8Q8NEN9 1154 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 MAFAQ8NHW3 353 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-208ENST00000586667 EDEM1Q92611 657 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 ZFRQ96KR1 1074 aaKnown RBP13.19□□□□□ -0.3
DNMT1-208ENST00000586667 MCEEQ96PE7 176 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 POMKQ9H5K3 350 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 CCSER2Q9H7U1 834 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 WDR35Q9P2L0 1181 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 UXTQ9UBK9 157 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-208ENST00000586667 CD207Q9UJ71 328 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 SALL4Q9UJQ4 1053 aa13.19□□□□□ -0.3
DNMT1-208ENST00000586667 SIGLEC16A6NMB1 481 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 PJA2O43164 708 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 COCHO43405 550 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 MTA2O94776 668 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 TBX18O95935 607 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 ABL1P00519 1130 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 TFE3P19532 575 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-208ENST00000586667 CDC25CP30307 473 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 RFC1P35251 1148 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-208ENST00000586667 MAGEA1P43355 309 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 YWHAZP63104 245 aaKnown RBP13.18□□□□□ -0.3
DNMT1-208ENST00000586667 SMAD4Q13485 552 aaKnown RBP13.18□□□□□ -0.3
DNMT1-208ENST00000586667 EIF4EBP2Q13542 120 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-208ENST00000586667 SPA17Q15506 151 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 ZNF276Q8N554 614 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 DQX1Q8TE96 717 aaKnown RBP13.18□□□□□ -0.3
DNMT1-208ENST00000586667 PPM1EQ8WY54 764 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 CTNNBL1Q8WYA6 563 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-208ENST00000586667 ING5Q8WYH8 240 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 RFFLQ8WZ73 363 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 NT5C3BQ969T7 300 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 FAM149B1Q96BN6 582 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 NUP85Q9BW27 656 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 SMOC2Q9H3U7 446 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 POPDC2Q9HBU9 364 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 OSGEPQ9NPF4 335 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 PRDM6Q9NQX0 595 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 TLR8Q9NR97 1041 aaKnown RBP13.18□□□□□ -0.3
DNMT1-208ENST00000586667 TRPM5Q9NZQ8 1165 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 TRIM10Q9UDY6 481 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 NAALADL1Q9UQQ1 740 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 COL4A3Q01955 1670 aa13.18□□□□□ -0.3
DNMT1-208ENST00000586667 TMEM191CA6NGB0 347 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 DPYSL4O14531 572 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 MDM4O15151 490 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 TLR5O60602 858 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 PRAMEF12O95522 483 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 FGF19O95750 216 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 RARGP13631 454 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 PPP3CCP48454 512 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 PSEN1P49768 467 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 SNX16P57768 344 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 GPC5P78333 572 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 ZXDBP98169 803 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 TAF12Q16514 161 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 RAB6CQ53S08 254 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 EFHC1Q5JVL4 640 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 TXNDC8Q6A555 127 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 EP400NLQ6ZTU2 488 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 TAC4Q86UU9 113 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 CPNE8Q86YQ8 564 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 DEFB106AQ8N104 65 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 ARHGAP18Q8N392 663 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 RIN3Q8TB24 985 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 ZSWIM3Q96MP5 696 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 NPY6RQ99463 290 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 RNF38Q9H0F5 515 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 RAB6CQ9H0N0 254 aa13.17□□□□□ -0.3
DNMT1-208ENST00000586667 PIDD1Q9HB75 910 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms