RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 GABBR2O75899 941 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 ACSL3O95573 720 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 ZSCAN5DPP0CG00 497 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 GHRP10912 638 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 TKTP29401 623 aaKnown RBP11.73□□□□□ -0.53
LIG3-204ENST00000585740 CD52P31358 61 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 LSP1P33241 339 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 NOS2P35228 1153 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 ATP5OP48047 213 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 NR2C2P49116 596 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 TSC2P49815 1807 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 SCNN1GP51170 649 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 AIF1P55008 147 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 HDAC4P56524 1084 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 ARL4CP56559 192 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 BCAR1P56945 870 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 MRPS5P82675 430 aaKnown RBP11.73□□□□□ -0.53
LIG3-204ENST00000585740 NR1H3Q13133 447 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 XRCC4Q13426 336 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 AUHQ13825 339 aaKnown RBP11.73□□□□□ -0.53
LIG3-204ENST00000585740 TAF5Q15542 800 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 KCTD19Q17RG1 926 aaPredicted RBP11.73□□□□□ -0.53
LIG3-204ENST00000585740 TRIM71Q2Q1W2 868 aaKnown RBP11.73□□□□□ -0.53
LIG3-204ENST00000585740 SLC25A52Q3SY17 297 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 TNFAIP8L3Q5GJ75 292 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 MDH1BQ5I0G3 518 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 ZNF618Q5T7W0 954 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 SH3PXD2AQ5TCZ1 1133 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 BZW1Q7L1Q6 419 aaKnown RBP11.73□□□□□ -0.53
LIG3-204ENST00000585740 CDKL3Q8IVW4 592 aaPredicted RBP11.73□□□□□ -0.53
LIG3-204ENST00000585740 PXYLP1Q8TE99 480 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 SH3TC2Q8TF17 1288 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 EPN3Q9H201 632 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 AGO3Q9H9G7 860 aaKnown RBP11.73□□□□□ -0.53
LIG3-204ENST00000585740 SAYSD1Q9NPB0 183 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 RRN3Q9NYV6 651 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 PAK5Q9P286 719 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 LGALS13Q9UHV8 139 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 SLC12A6Q9UHW9 1150 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 FARP1Q9Y4F1 1045 aaPredicted RBP11.73□□□□□ -0.53
LIG3-204ENST00000585740 FRMPD3Q5JV73 1810 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 BCLAF3A2AJT9 711 aaKnown RBP11.72□□□□□ -0.53
LIG3-204ENST00000585740 E7EVH7 732 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 HCRTO43612 131 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 CDH16O75309 829 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 AP1G2O75843 785 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 CYP11A1P05108 521 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 ETS1P14921 441 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 PECAM1P16284 738 aaPredicted RBP11.72□□□□□ -0.53
LIG3-204ENST00000585740 PHBP35232 272 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 RPL22P35268 128 aaKnown RBP11.72□□□□□ -0.53
LIG3-204ENST00000585740 MMP13P45452 471 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 SULT1E1P49888 294 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 CLCNKBP51801 687 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 ACLYP53396 1101 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 YWHAZP63104 245 aaKnown RBP11.72□□□□□ -0.53
LIG3-204ENST00000585740 ADIGQ0VDE8 80 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 CBLBQ13191 982 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 MMRN1Q13201 1228 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 TUSC3Q13454 348 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 LPIN1Q14693 890 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 MAPRE1Q15691 268 aaKnown RBP11.72□□□□□ -0.53
LIG3-204ENST00000585740 HIF1AQ16665 826 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 KYNUQ16719 465 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 UPP1Q16831 310 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 FAM35AQ86V20 835 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 SPATS2Q86XZ4 545 aaKnown RBP11.72□□□□□ -0.53
LIG3-204ENST00000585740 GLIS1Q8NBF1 620 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 BCAS4Q8TDM0 211 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 EPS8L3Q8TE67 593 aaKnown RBP11.72□□□□□ -0.53
LIG3-204ENST00000585740 PRCCQ92733 491 aaPredicted RBP11.72□□□□□ -0.53
LIG3-204ENST00000585740 LPPQ93052 612 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 RTP4Q96DX8 246 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 SMARCD1Q96GM5 515 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 GLT1D1Q96MS3 346 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 SLC2A13Q96QE2 648 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 LPIN3Q9BQK8 851 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 TRIM62Q9BVG3 475 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 B3GNT5Q9BYG0 378 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 CNGB3Q9NQW8 809 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 MIOSQ9NXC5 875 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 AP4E1Q9UPM8 1137 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 ACTL7BQ9Y614 415 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 COL6A3P12111 3177 aa11.72□□□□□ -0.53
LIG3-204ENST00000585740 MEIS3P2A8K0S8 358 aa11.71□□□□□ -0.53
LIG3-204ENST00000585740 HACD1B0YJ81 288 aa11.71□□□□□ -0.53
LIG3-204ENST00000585740 C9IYK1 514 aa11.71□□□□□ -0.53
LIG3-204ENST00000585740 H3BRJ5 948 aa11.71□□□□□ -0.53
LIG3-204ENST00000585740 CHADO15335 359 aa11.71□□□□□ -0.53
LIG3-204ENST00000585740 ZBED1O96006 694 aa11.71□□□□□ -0.53
LIG3-204ENST00000585740 MYCNP04198 464 aaPredicted RBP11.71□□□□□ -0.53
LIG3-204ENST00000585740 ELNP15502 786 aa11.71□□□□□ -0.53
LIG3-204ENST00000585740 ATP2A2P16615 1042 aaKnown RBP11.71□□□□□ -0.53
LIG3-204ENST00000585740 TYMPP19971 482 aa11.71□□□□□ -0.53
LIG3-204ENST00000585740 IL4RP24394 825 aa11.71□□□□□ -0.53
LIG3-204ENST00000585740 ACAT1P24752 427 aaKnown RBP11.71□□□□□ -0.53
LIG3-204ENST00000585740 CYP2F1P24903 491 aa11.71□□□□□ -0.53
LIG3-204ENST00000585740 L1CAMP32004 1257 aa11.71□□□□□ -0.53
LIG3-204ENST00000585740 ARL4AP40617 200 aa11.71□□□□□ -0.53
LIG3-204ENST00000585740 ZNF135P52742 658 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms