RNA–Protein interactions for RNA: ENST00000585388.1

LSM12-202, Transcript of LSM12 homolog, humanhuman

TSL 3 BASIC

Gene LSM12, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-202ENST00000585388 CIZ1Q9ULV3 898 aaPredicted RBP17.3■□□□□ 0.36
LSM12-202ENST00000585388 PCDHA5Q9Y5H7 936 aa17.3■□□□□ 0.36
LSM12-202ENST00000585388 TNRC6BQ9UPQ9 1833 aaKnown RBP17.3■□□□□ 0.36
LSM12-202ENST00000585388 ABCA7Q8IZY2 2146 aa17.3■□□□□ 0.36
LSM12-202ENST00000585388 CACNA1BQ00975 2339 aa17.29■□□□□ 0.36
LSM12-202ENST00000585388 TCRBV21S2A2A0A5A6 115 aa17.29■□□□□ 0.36
LSM12-202ENST00000585388 MAP3K13O43283 966 aa17.29■□□□□ 0.36
LSM12-202ENST00000585388 HNRNPLP14866 589 aaKnown RBP eCLIP17.29■□□□□ 0.36
LSM12-202ENST00000585388 RPL13P26373 211 aaKnown RBP17.29■□□□□ 0.36
LSM12-202ENST00000585388 PMLP29590 882 aa17.29■□□□□ 0.36
LSM12-202ENST00000585388 C1orf220Q5T0J3 134 aa17.29■□□□□ 0.36
LSM12-202ENST00000585388 C10orf76Q5T2E6 689 aa17.29■□□□□ 0.36
LSM12-202ENST00000585388 N4BP2L1Q5TBK1 243 aaPredicted RBP17.29■□□□□ 0.36
LSM12-202ENST00000585388 EMC10Q5UCC4 262 aa17.29■□□□□ 0.36
LSM12-202ENST00000585388 CLEC20AQ6ZU45 233 aa17.29■□□□□ 0.36
LSM12-202ENST00000585388 HTR3DQ70Z44 454 aa17.29■□□□□ 0.36
LSM12-202ENST00000585388 ZNF513Q8N8E2 541 aaPredicted RBP17.29■□□□□ 0.36
LSM12-202ENST00000585388 NAT16Q8N8M0 369 aa17.29■□□□□ 0.36
LSM12-202ENST00000585388 HMGB4Q8WW32 186 aa17.29■□□□□ 0.36
LSM12-202ENST00000585388 HNRNPABQ99729 332 aaKnown RBP17.29■□□□□ 0.36
LSM12-202ENST00000585388 NT5C1AQ9BXI3 368 aa17.29■□□□□ 0.36
LSM12-202ENST00000585388 SCML2Q9UQR0 700 aa17.29■□□□□ 0.36
LSM12-202ENST00000585388 FAM237AA0A1B0GTK4 181 aa17.28■□□□□ 0.36
LSM12-202ENST00000585388 KCNK5O95279 499 aa17.28■□□□□ 0.36
LSM12-202ENST00000585388 ATP5C1P36542 298 aaKnown RBP17.28■□□□□ 0.36
LSM12-202ENST00000585388 DPP6P42658 865 aa17.28■□□□□ 0.36
LSM12-202ENST00000585388 SPDYCQ5MJ68 293 aa17.28■□□□□ 0.36
LSM12-202ENST00000585388 GRAMD4Q6IC98 578 aa17.28■□□□□ 0.36
LSM12-202ENST00000585388 TMEM25Q86YD3 366 aa17.28■□□□□ 0.36
LSM12-202ENST00000585388 FAM186BQ8IYM0 893 aa17.28■□□□□ 0.36
LSM12-202ENST00000585388 PGBD3Q8N328 593 aa17.28■□□□□ 0.36
LSM12-202ENST00000585388 GUF1Q8N442 669 aaKnown RBP17.28■□□□□ 0.36
LSM12-202ENST00000585388 JAKMIP2Q96AA8 810 aa17.28■□□□□ 0.36
LSM12-202ENST00000585388 CYFIP2Q96F07 1278 aa17.28■□□□□ 0.36
LSM12-202ENST00000585388 CHAMP1Q96JM3 812 aa17.28■□□□□ 0.36
LSM12-202ENST00000585388 XPO6Q96QU8 1125 aaKnown RBP17.28■□□□□ 0.36
LSM12-202ENST00000585388 TMEM9BQ9NQ34 198 aa17.28■□□□□ 0.36
LSM12-202ENST00000585388 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.28■□□□□ 0.366e-6■■■■■ 48.1
LSM12-202ENST00000585388 DNAJC17Q9NVM6 304 aaKnown RBP17.28■□□□□ 0.36
LSM12-202ENST00000585388 KMT2BQ9UMN6 2715 aaPredicted RBP17.28■□□□□ 0.36
LSM12-202ENST00000585388 CYP26A1O43174 497 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 CACNG3O60359 315 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 ADAM23O75077 832 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 PRR29P0C7W0 189 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 TRIM49P0CI25 452 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 TRIM49CP0CI26 452 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 ACO1P21399 889 aaKnown RBP17.27■□□□□ 0.36
LSM12-202ENST00000585388 PSMC2P35998 433 aaKnown RBP17.27■□□□□ 0.36
LSM12-202ENST00000585388 GCLMP48507 274 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 PSEN1P49768 467 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 NDUFA8P51970 172 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 SHC2P98077 582 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 DPYDQ12882 1025 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 ST3GAL2Q16842 350 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 PSAPL1Q6NUJ1 521 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 KLHDC10Q6PID8 442 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 GPRIN1Q7Z2K8 1008 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 TADA2BQ86TJ2 420 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 TAS1R2Q8TE23 839 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 RLN3Q8WXF3 142 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 PIGKQ92643 395 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 WBP2Q969T9 261 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 CCDC34Q96HJ3 373 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 TWNKQ96RR1 684 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 BBS2Q9BXC9 721 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 KLF16Q9BXK1 252 aaPredicted RBP17.27■□□□□ 0.36
LSM12-202ENST00000585388 ZDHHC4Q9NPG8 344 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 MARK1Q9P0L2 795 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 WDR35Q9P2L0 1181 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 EVLQ9UI08 416 aaPredicted RBP17.27■□□□□ 0.36
LSM12-202ENST00000585388 ATP6V1DQ9Y5K8 247 aa17.27■□□□□ 0.36
LSM12-202ENST00000585388 CHD8Q9HCK8 2581 aa17.26■□□□□ 0.35
LSM12-202ENST00000585388 MYO18AQ92614 2054 aaKnown RBP17.26■□□□□ 0.35
LSM12-202ENST00000585388 C4orf47A7E2U8 309 aa17.26■□□□□ 0.35
LSM12-202ENST00000585388 HHLA1C9JL84 531 aa17.26■□□□□ 0.35
LSM12-202ENST00000585388 NEDD8-MDP1E9PL57 170 aa17.26■□□□□ 0.35
LSM12-202ENST00000585388 ZBTB24O43167 697 aaPredicted RBP17.26■□□□□ 0.35
LSM12-202ENST00000585388 CILPO75339 1184 aa17.26■□□□□ 0.35
LSM12-202ENST00000585388 TBX18O95935 607 aa17.26■□□□□ 0.35
LSM12-202ENST00000585388 HOXB2P14652 356 aa17.26■□□□□ 0.35
LSM12-202ENST00000585388 CD58P19256 250 aa17.26■□□□□ 0.35
LSM12-202ENST00000585388 NTSR1P30989 418 aa17.26■□□□□ 0.35
LSM12-202ENST00000585388 PGFP49763 221 aa17.26■□□□□ 0.35
LSM12-202ENST00000585388 NOVA1P51513 510 aaKnown RBP17.26■□□□□ 0.35
LSM12-202ENST00000585388 PPP3CAQ08209 521 aa17.26■□□□□ 0.35
LSM12-202ENST00000585388 LMAN2Q12907 356 aa17.26■□□□□ 0.35
LSM12-202ENST00000585388 TTC39CQ8N584 583 aa17.26■□□□□ 0.35
LSM12-202ENST00000585388 NUSAP1Q9BXS6 441 aaKnown RBP17.26■□□□□ 0.35
LSM12-202ENST00000585388 SCAND2PQ9GZW5 306 aaPredicted RBP17.26■□□□□ 0.35
LSM12-202ENST00000585388 APOBEC3GQ9HC16 384 aaKnown RBP17.26■□□□□ 0.35
LSM12-202ENST00000585388 TMEM8AQ9HCN3 771 aa17.26■□□□□ 0.35
LSM12-202ENST00000585388 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.26■□□□□ 0.35
LSM12-202ENST00000585388 DNMT3LQ9UJW3 386 aa17.26■□□□□ 0.35
LSM12-202ENST00000585388 STARD13Q9Y3M8 1113 aa17.26■□□□□ 0.35
LSM12-202ENST00000585388 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.25■□□□□ 0.35
LSM12-202ENST00000585388 PATE3B3GLJ2 98 aa17.25■□□□□ 0.35
LSM12-202ENST00000585388 AP5Z1O43299 807 aa17.25■□□□□ 0.35
LSM12-202ENST00000585388 GREM1O60565 184 aa17.25■□□□□ 0.35
LSM12-202ENST00000585388 RARGP13631 454 aa17.25■□□□□ 0.35
LSM12-202ENST00000585388 TYRP14679 529 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms