RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, human

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAPA-208	ENST00000584796	P2RX7	Q99572	595 aa	Known RBP	3.56	□□□□□ -1.84
VAPA-208	ENST00000584796	C17orf80	Q9BSJ5	609 aa		3.56	□□□□□ -1.84
VAPA-208	ENST00000584796	TRIM54	Q9BYV2	358 aa		3.56	□□□□□ -1.84
VAPA-208	ENST00000584796	DPH1	Q9BZG8	443 aa		3.56	□□□□□ -1.84
VAPA-208	ENST00000584796	SLC12A5	Q9H2X9	1139 aa		3.56	□□□□□ -1.84
VAPA-208	ENST00000584796	ARMT1	Q9H993	441 aa		3.56	□□□□□ -1.84
VAPA-208	ENST00000584796	CNNM1	Q9NRU3	951 aa		3.56	□□□□□ -1.84
VAPA-208	ENST00000584796	PIH1D1	Q9NWS0	290 aa	Known RBP	3.56	□□□□□ -1.84
VAPA-208	ENST00000584796	CPA4	Q9UI42	421 aa		3.56	□□□□□ -1.84
VAPA-208	ENST00000584796	TET3	O43151	1660 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	LRP5	O75197	1615 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	NHSL1	Q5SYE7	1610 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	ERVK-7	P63135	1459 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	ARHGAP23	Q9P227	1491 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	FAM135B	Q49AJ0	1406 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	CNTNAP2	Q9UHC6	1331 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	IGKV2D-30	A0A075B6S6	120 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796		M0R3H8	397 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	PMPCB	O75439	489 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	GCAT	O75600	419 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	OAZ2	O95190	189 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	MT-CO3	P00414	261 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	PHKG2	P15735	406 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	NPR1	P16066	1061 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	PLA1A	Q53H76	456 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	CERCAM	Q5T4B2	595 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	LMBRD2	Q68DH5	695 aa	Predicted RBP	3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	ZBTB46	Q86UZ6	589 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	GRAMD1C	Q8IYS0	662 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	SLC15A4	Q8N697	577 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	DNAJC5G	Q8N7S2	189 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	OSR1	Q8TAX0	266 aa	Predicted RBP	3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	BPIFB1	Q8TDL5	484 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	MARK4	Q96L34	752 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	SIGLEC11	Q96RL6	698 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	GAR1	Q9NY12	217 aa	Known RBP	3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	MARF1	Q9Y4F3	1742 aa	Known RBP	3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	GCC2	Q8IWJ2	1684 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	CAMTA1	Q9Y6Y1	1673 aa		3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	AHDC1	Q5TGY3	1603 aa	Predicted RBP	3.55	□□□□□ -1.84
VAPA-208	ENST00000584796	MBD5	Q9P267	1494 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	TMEM94	Q12767	1356 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	ZMYM2	Q9UBW7	1377 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	SPAG9	O60271	1321 aa	Known RBP	3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	CCDC187	A0A096LP49	1063 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	CNOT3	O75175	753 aa	Known RBP	3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	ABLIM3	O94929	683 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	APEH	P13798	732 aa	Known RBP	3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	PRKAG1	P54619	331 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	BCAT1	P54687	386 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	SUMO2	P61956	95 aa	Known RBP	3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	CFHR1	Q03591	330 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	LMAN2	Q12907	356 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	FGL2	Q14314	439 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	LARS2	Q15031	903 aa	Known RBP	3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	MLC1	Q15049	377 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	LEXM	Q3ZCV2	418 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	BRDT	Q58F21	947 aa	Predicted RBP	3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	PTCHD4	Q6ZW05	846 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	MEPCE	Q7L2J0	689 aa	Known RBP	3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	LIX1L	Q8IVB5	337 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	DIS3L	Q8TF46	1054 aa	Known RBP	3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	TMEM171	Q8WVE6	324 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	MAP4K1	Q92918	833 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	CCDC17	Q96LX7	622 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	GBA2	Q9HCG7	927 aa	Predicted RBP	3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	PCDH12	Q9NPG4	1184 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	PI4KB	Q9UBF8	816 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	STAP2	Q9UGK3	403 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	SLIT1	O75093	1534 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	FAM135A	Q9P2D6	1515 aa		3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	SCAF11	Q99590	1463 aa	Known RBP	3.54	□□□□□ -1.84
VAPA-208	ENST00000584796	MIA2	Q96PC5	1412 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	PSMD9	O00233	223 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	CES2	O00748	559 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	TLR2	O60603	784 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	RNF8	O76064	485 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	TOMM40	O96008	361 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	SCP2	P22307	547 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	THBS3	P49746	956 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	CTBP1	Q13363	440 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	CCNI	Q14094	377 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	ZNF267	Q14586	743 aa	Predicted RBP	3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	SEC23B	Q15437	767 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	PTCHD3	Q3KNS1	767 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	AWAT1	Q58HT5	328 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	TMEM63B	Q5T3F8	832 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	ZNF783	Q6ZMS7	281 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	C9orf47	Q6ZRZ4	202 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	RAB11FIP4	Q86YS3	637 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	SPATA3	Q8NHX4	192 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	ADAMTS15	Q8TE58	950 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	PPP2R3C	Q969Q6	453 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	CTHRC1	Q96CG8	243 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	MS4A7	Q9GZW8	240 aa	Predicted RBP	3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	FOXP1	Q9H334	677 aa	Predicted RBP	3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	HOMER2	Q9NSB8	354 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	DRG1	Q9Y295	367 aa	Known RBP	3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	ANKRD6	Q9Y2G4	727 aa		3.53	□□□□□ -1.84
VAPA-208	ENST00000584796	COL4A3BP	Q9Y5P4	624 aa		3.53	□□□□□ -1.84

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