RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 WBP2Q969T9 261 aa13.52□□□□□ -0.25
SS18-219ENST00000581570 CRELD1Q96HD1 420 aa13.52□□□□□ -0.25
SS18-219ENST00000581570 ZNF518BQ9C0D4 1074 aa13.52□□□□□ -0.25
SS18-219ENST00000581570 CCSER2Q9H7U1 834 aa13.52□□□□□ -0.25
SS18-219ENST00000581570 TOR4AQ9NXH8 423 aa13.52□□□□□ -0.25
SS18-219ENST00000581570 WSB2Q9NYS7 404 aaPredicted RBP13.52□□□□□ -0.25
SS18-219ENST00000581570 NFE2L3Q9Y4A8 694 aa13.52□□□□□ -0.25
SS18-219ENST00000581570 NME7Q9Y5B8 376 aa13.52□□□□□ -0.25
SS18-219ENST00000581570 PLXNB3Q9ULL4 1909 aa13.52□□□□□ -0.25
SS18-219ENST00000581570 PTPRJQ12913 1337 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 GOLGA8CPA6NN73 597 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 WASH3PC4AMC7 463 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 NEDD8-MDP1E9PL57 170 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 H3BQV1 296 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 GFRA2O00451 464 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 PRPF6O94906 941 aaKnown RBP13.51□□□□□ -0.25
SS18-219ENST00000581570 PRB1P04280 392 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 FAM163BP0C2L3 166 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 NCAM1P13591 858 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 TYRP14679 529 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 CASP5P51878 434 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 SURF1Q15526 300 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 HLA-BQ31612 363 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 SNX30Q5VWJ9 437 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 DBX2Q6ZNG2 339 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 METTL3Q86U44 580 aaKnown RBP13.51□□□□□ -0.25
SS18-219ENST00000581570 CADM4Q8NFZ8 388 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 BAHD1Q8TBE0 780 aaPredicted RBP13.51□□□□□ -0.25
SS18-219ENST00000581570 TOE1Q96GM8 510 aaKnown RBP13.51□□□□□ -0.25
SS18-219ENST00000581570 UBL7Q96S82 380 aaPredicted RBP13.51□□□□□ -0.25
SS18-219ENST00000581570 KIF2CQ99661 725 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 GPR174Q9BXC1 333 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 BBS2Q9BXC9 721 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 B3GNT5Q9BYG0 378 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 NACA2Q9H009 215 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 DPEP3Q9H4B8 488 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 WDR35Q9P2L0 1181 aa13.51□□□□□ -0.25
SS18-219ENST00000581570 FNDC3AQ9Y2H6 1198 aaKnown RBP13.51□□□□□ -0.25
SS18-219ENST00000581570 ZNF233A6NK53 670 aa13.5□□□□□ -0.25
SS18-219ENST00000581570 BCAT2O15382 392 aaPredicted RBP13.5□□□□□ -0.25
SS18-219ENST00000581570 FLRT2O43155 660 aa13.5□□□□□ -0.25
SS18-219ENST00000581570 CACNG3O60359 315 aa13.5□□□□□ -0.25
SS18-219ENST00000581570 TACC1O75410 805 aa13.5□□□□□ -0.25
SS18-219ENST00000581570 DKK1O94907 266 aa13.5□□□□□ -0.25
SS18-219ENST00000581570 TUBP50607 506 aa13.5□□□□□ -0.25
SS18-219ENST00000581570 BNC1Q01954 994 aa13.5□□□□□ -0.25
SS18-219ENST00000581570 CAMK2BQ13554 666 aa13.5□□□□□ -0.25
SS18-219ENST00000581570 DCAF12L1Q5VU92 463 aa13.5□□□□□ -0.25
SS18-219ENST00000581570 TPGS1Q6ZTW0 290 aa13.5□□□□□ -0.25
SS18-219ENST00000581570 HTR3DQ70Z44 454 aa13.5□□□□□ -0.25
SS18-219ENST00000581570 SCAMP5Q8TAC9 235 aa13.5□□□□□ -0.25
SS18-219ENST00000581570 DNAJC19Q96DA6 116 aa13.5□□□□□ -0.25
SS18-219ENST00000581570 KCNK16Q96T55 309 aa13.5□□□□□ -0.25
SS18-219ENST00000581570 ITM2CQ9NQX7 267 aa13.5□□□□□ -0.25
SS18-219ENST00000581570 PCDHGB2Q9Y5G2 931 aa13.5□□□□□ -0.25
SS18-219ENST00000581570 MYOFQ9NZM1 2061 aa13.5□□□□□ -0.25
SS18-219ENST00000581570 CEP192Q8TEP8 1941 aa13.5□□□□□ -0.25
SS18-219ENST00000581570 MYO18AQ92614 2054 aaKnown RBP13.49□□□□□ -0.25
SS18-219ENST00000581570 FAM149AA5PLN7 773 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 METTL12A8MUP2 240 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 A8MXQ7 604 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 KIAA0391O15091 583 aaKnown RBP13.49□□□□□ -0.25
SS18-219ENST00000581570 BMP15O95972 392 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 CST3P01034 146 aaPredicted RBP13.49□□□□□ -0.25
SS18-219ENST00000581570 IDEP14735 1019 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 ABCG1P45844 678 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 DGKGP49619 791 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 ALCAMQ13740 583 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 STARD3Q14849 445 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 SUZ12Q15022 739 aaKnown RBP13.49□□□□□ -0.25
SS18-219ENST00000581570 FUT11Q495W5 492 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 SV2BQ7L1I2 683 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 TRAPPC11Q7Z392 1133 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 PDCD7Q8N8D1 485 aaKnown RBP13.49□□□□□ -0.25
SS18-219ENST00000581570 B3GALNT2Q8NCR0 500 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 SLC39A7Q92504 469 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 EPSTI1Q96J88 318 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 DCBLD2Q96PD2 775 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 OLFML3Q9NRN5 406 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 IL37Q9NZH6 218 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 MARK1Q9P0L2 795 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 GMIPQ9P107 970 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 USP36Q9P275 1121 aaKnown RBP13.49□□□□□ -0.25
SS18-219ENST00000581570 STK17AQ9UEE5 414 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 CCDC39Q9UFE4 941 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 STON1Q9Y6Q2 735 aa13.49□□□□□ -0.25
SS18-219ENST00000581570 TK2O00142 265 aa13.48□□□□□ -0.25
SS18-219ENST00000581570 GREM1O60565 184 aa13.48□□□□□ -0.25
SS18-219ENST00000581570 CISD3P0C7P0 127 aa13.48□□□□□ -0.25
SS18-219ENST00000581570 ZDHHC11BP0C7U3 371 aa13.48□□□□□ -0.25
SS18-219ENST00000581570 OXTRP30559 389 aa13.48□□□□□ -0.25
SS18-219ENST00000581570 SLC5A3P53794 718 aa13.48□□□□□ -0.25
SS18-219ENST00000581570 TNNC1P63316 161 aa13.48□□□□□ -0.25
SS18-219ENST00000581570 WDR72Q3MJ13 1102 aa13.48□□□□□ -0.25
SS18-219ENST00000581570 USP49Q70CQ1 688 aa13.48□□□□□ -0.25
SS18-219ENST00000581570 CBWD2Q8IUF1 395 aa13.48□□□□□ -0.25
SS18-219ENST00000581570 WDR49Q8IV35 697 aa13.48□□□□□ -0.25
SS18-219ENST00000581570 MED10Q9BTT4 135 aa13.48□□□□□ -0.25
SS18-219ENST00000581570 KLF16Q9BXK1 252 aaPredicted RBP13.48□□□□□ -0.25
SS18-219ENST00000581570 FGFBP2Q9BYJ0 223 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms